Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:112234_5

Gene Name Gene ID Reads Annotation
zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 zgc:112234 [Source:NCBI gene;Acc:554097]










Genes with expression patterns similar to zgc:112234_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 6 - 1.000 1.000 1.000 1.000 - 1.000 1.000 - zgc:112234 [Source:NCBI gene;Acc:554097]
2. arrb2a ENSDARG00000039215 5 2 - 1.000 - 1.000 - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
3. si:ch211-188i4.4 5 2 - 1.000 - - 1.000 - - - - si:ch211-188i4.4, transcript variant X3
4. si:dkey-233e3.4 si:dkey-233e3.4 3 2 - 1.000 - 1.000 - - - - -
5. BX321870.1 ENSDARG00000098519 9 1.984 - 1.000 0.984 - - - - - -
6. pdk3a ENSDARG00000014527 15 1.983 - - 0.983 1.000 - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
7. nmrk1 ENSDARG00000037913 18 1.845 - 1.000 - - - - 0.845 - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
8. MFAP4_3 MFAP4_3 7 1.844 - 1.000 - - 0.844 - - - -
9. ODF2 ODF2 6 1.844 - 1.000 - - 0.844 - - - -
10. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.844 - - - 1.000 0.844 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
11. MOB2 MOB2 4 1.844 - 1.000 - - 0.844 - - - -
12. FP236851.1 FP236851.1 10 1.791 - 1.000 - - 0.791 - - - -
13. SNORD59 SNORD59 7 1.781 - 1.000 - - - - - 0.781 -
14. ALOX5_2 ALOX5_2 6 1.764 - 1.000 - - 0.764 - - - -
15. FBXO40_1 FBXO40_1 59 1.764 - 1.000 - - - - 0.764 - -
16. si:dkey-241f21.7 si:dkey-241f21.7 3 1.737 - 1.000 - - 0.737 - - - -
17. OVGP1 ENSDARG00000075745 6 1.72 - - - - 0.844 - 0.876 - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
18. si:dkey-24p1.7 ENSDARG00000089404 7 1.709 - 1.000 - - 0.709 - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
19. crygs1 ENSDARG00000042992 45 1.69 - - - - 0.844 - 0.846 - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
20. CABZ01030262.1 CABZ01030262.1 11 1.683 - - - - 0.844 - - 0.839 -
21. abcd1 ENSDARG00000074876 6 1.67 - - - 0.826 0.844 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
22. epm2a ENSDARG00000059044 10 1.655 - - - - - - 0.823 0.832 - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
23. mfge8a ENSDARG00000015349 66 1.637 - 0.875 - - - - 0.762 - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
24. si:rp71-26b20.1 si:rp71-26b20.1 11 1.63 - - - 0.893 0.737 - - - -
25. lrit1b ENSDARG00000099406 12 1.614 - - - 0.893 - - - 0.721 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]
26. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1.586 - 0.710 - - - - 0.876 - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
27. BX957297.2 ENSDARG00000105608 194 1.537 - 0.742 - - - - 0.795 - -
28. med15 ENSDARG00000014292 57 1.528 - - 0.818 - - - 0.710 - - mediator complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2032]
29. GRIN2B GRIN2B 140 1 - 1.000 - - - - - - -
30. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
31. si:dkey-225k4.1 ENSDARG00000092045 47 1 - 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
32. BX927122.3 BX927122.3 19 1 - 1.000 - - - - - - -
33. MFAP4_7 MFAP4_7 43 1 - 1.000 - - - - - - -
34. igsf5 igsf5 85 1 - 1.000 - - - - - - -
35. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
36. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
37. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
38. GAS2 18 1 - 1.000 - - - - - - - growth arrest specific 2, transcript variant X1
39. si:dkey-81p22.11 ENSDARG00000093797 68 1 - 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
40. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
41. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
42. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
43. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
44. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
45. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
46. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
47. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
48. BX323793.4 BX323793.4 8 1 - - - 1.000 - - - - -
49. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
50. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
51. col8a1b ENSDARG00000003533 18 1 - 1.000 - - - - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
52. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
53. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
54. zte38 ENSDARG00000037056 0 1 - - - 1.000 - - - - - zebrafish testis-expressed 38 [Source:ZFIN;Acc:ZDB-GENE-060312-39]
55. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
56. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
57. CMKLR1_1 CMKLR1_1 2 1 - - - 1.000 - - - - -
58. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
59. CR774179.1 ENSDARG00000086969 3 1 - - - 1.000 - - - - -
60. APOD_1 APOD_1 7 1 - - - 1.000 - - - - -
61. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
62. U1_4 U1_4 0 1 - 1.000 - - - - - - -
63. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
64. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
65. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - 1.000 - - - - -
66. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
67. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
68. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
69. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
70. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
71. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
72. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
73. kif20a ENSDARG00000044491 12 1 - 1.000 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
74. paqr7a ENSDARG00000100462 15 1 - - - 1.000 - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
75. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
76. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
77. vcam1 vcam1 243 1 - 1.000 - - - - - - -
78. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
79. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
80. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
81. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
82. bmp1b ENSDARG00000028053 25 1 - 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
83. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
84. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
85. si:ch211-57m13.9 ENSDARG00000095884 10 1 - 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
86. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
87. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
88. DUSP13 DUSP13 2 1 - 1.000 - - - - - - -
89. UNC119 UNC119 104 1 - - - 1.000 - - - - -
90. lactbl1a ENSDARG00000089063, ENSDARG00000114144, ENSDARG00000116950 0 1 - - - 1.000 - - - - - lactamase, beta-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7625]
91. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
92. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - - 1.000 - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
93. fam5b fam5b 45 1 - 1.000 - - - - - - -
94. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - 1.000 - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
95. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
96. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
97. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
98. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - 1.000 - - - - - - -
99. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
100. NRP2 NRP2 5 1 - - - 1.000 - - - - -

There are 816 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA