Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:112234_5

Gene Name Gene ID Reads Annotation
zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 zgc:112234 [Source:NCBI gene;Acc:554097]










Genes with expression patterns similar to zgc:112234_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 6 - 1.000 1.000 1.000 1.000 - 1.000 1.000 - zgc:112234 [Source:NCBI gene;Acc:554097]
2. si:ch211-188i4.4 5 2 - 1.000 - - 1.000 - - - - si:ch211-188i4.4, transcript variant X3
3. arrb2a ENSDARG00000039215 5 2 - 1.000 - 1.000 - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
4. si:dkey-233e3.4 si:dkey-233e3.4 3 2 - 1.000 - 1.000 - - - - -
5. BX321870.1 ENSDARG00000098519 9 1.984 - 1.000 0.984 - - - - - -
6. pdk3a ENSDARG00000014527 15 1.983 - - 0.983 1.000 - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
7. nmrk1 ENSDARG00000037913 18 1.845 - 1.000 - - - - 0.845 - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
8. ODF2 ODF2 6 1.844 - 1.000 - - 0.844 - - - -
9. MOB2 MOB2 4 1.844 - 1.000 - - 0.844 - - - -
10. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.844 - - - 1.000 0.844 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
11. MFAP4_3 MFAP4_3 7 1.844 - 1.000 - - 0.844 - - - -
12. FP236851.1 FP236851.1 10 1.791 - 1.000 - - 0.791 - - - -
13. SNORD59 SNORD59 7 1.781 - 1.000 - - - - - 0.781 -
14. FBXO40_1 FBXO40_1 59 1.764 - 1.000 - - - - 0.764 - -
15. ALOX5_2 ALOX5_2 6 1.764 - 1.000 - - 0.764 - - - -
16. si:dkey-241f21.7 si:dkey-241f21.7 3 1.737 - 1.000 - - 0.737 - - - -
17. OVGP1 ENSDARG00000075745 6 1.72 - - - - 0.844 - 0.876 - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
18. si:dkey-24p1.7 ENSDARG00000089404 7 1.709 - 1.000 - - 0.709 - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
19. crygs1 ENSDARG00000042992 45 1.69 - - - - 0.844 - 0.846 - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
20. CABZ01030262.1 CABZ01030262.1 11 1.683 - - - - 0.844 - - 0.839 -
21. abcd1 ENSDARG00000074876 6 1.67 - - - 0.826 0.844 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
22. epm2a ENSDARG00000059044 10 1.655 - - - - - - 0.823 0.832 - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
23. mfge8a ENSDARG00000015349 66 1.637 - 0.875 - - - - 0.762 - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
24. si:rp71-26b20.1 si:rp71-26b20.1 11 1.63 - - - 0.893 0.737 - - - -
25. lrit1b ENSDARG00000099406 12 1.614 - - - 0.893 - - - 0.721 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]
26. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1.586 - 0.710 - - - - 0.876 - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
27. BX957297.2 ENSDARG00000105608 194 1.537 - 0.742 - - - - 0.795 - -
28. med15 ENSDARG00000014292 57 1.528 - - 0.818 - - - 0.710 - - mediator complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2032]
29. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
30. si:ch211-237l4.6 ENSDARG00000056915 49 1 - 1.000 - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
31. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
32. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - 1.000 - - - - - - -
33. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - 1.000 - - - - -
34. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
35. kcna1 kcna1 174 1 - 1.000 - - - - - - -
36. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
37. si:ch211-133l5.4 ENSDARG00000092533 5 1 - - - 1.000 - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
38. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
39. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
40. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
41. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
42. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
43. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
44. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
45. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - 1.000 - - - - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
46. zgc:114037_3 17 1 - - - 1.000 - - - - - zgc:114037
47. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
48. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
49. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
50. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - 1.000 - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
51. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
52. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
53. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
54. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1 - 1.000 - - - - - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
55. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
56. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
57. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
58. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
59. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
60. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
61. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
62. CU652893.1 ENSDARG00000104131 3 1 - 1.000 - - - - - - -
63. zte38 ENSDARG00000037056 0 1 - - - 1.000 - - - - - zebrafish testis-expressed 38 [Source:ZFIN;Acc:ZDB-GENE-060312-39]
64. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
65. lama3 ENSDARG00000071462 1 1 - 1.000 - - - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
66. entpd2b ENSDARG00000044795 7 1 - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
67. si:dkey-81p22.11 ENSDARG00000093797 68 1 - 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
68. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
69. si:dkeyp-77c8.1 ENSDARG00000093940 0 1 - 1.000 - - - - - - - si:dkeyp-77c8.1 [Source:ZFIN;Acc:ZDB-GENE-090313-397]
70. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
71. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
72. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
73. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
74. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
75. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
76. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
77. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
78. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
79. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
80. GLS2 GLS2 10 1 - 1.000 - - - - - - -
81. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
82. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
83. st6gal1 ENSDARG00000044514 142 1 - 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
84. sowahca ENSDARG00000098790 1 1 - 1.000 - - - - - - - sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
85. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
86. si:dkey-19a16.2 ENSDARG00000058794 8 1 - 1.000 - - - - - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
87. slc1a9 ENSDARG00000098269 12 1 - 1.000 - - - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
88. GRIN2B GRIN2B 140 1 - 1.000 - - - - - - -
89. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
90. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
91. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
92. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
93. CABZ01008480.1 CABZ01008480.1 0 1 - 1.000 - - - - - - -
94. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
95. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 - - - 1.000 - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
96. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
97. kif20a ENSDARG00000044491 12 1 - 1.000 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
98. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
99. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
100. thbs2a ENSDARG00000060410 0 1 - 1.000 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]

There are 816 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA