Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zgc:110540

Gene Name Gene ID Reads Annotation
zgc:110540 ENSDARG00000054929 2154 zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]










Genes with expression patterns similar to zgc:110540

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:110540 ENSDARG00000054929 2154 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
2. celf3a ENSDARG00000034668 2432 2.569 - - - 0.970 - - - 0.850 0.749 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
3. snrpe ENSDARG00000033175 7462 2.531 - - - 0.944 - - 0.711 0.876 - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
4. rbb4 rbb4 15541 2.303 - - - 0.862 - - 0.706 - 0.735
5. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 2.268 - 0.786 - - - - - 0.754 0.728 PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
6. otx2 766 2.22 - - - - - - 0.714 0.798 0.708 orthodenticle homeobox 2, transcript variant X2
7. marcksa ENSDARG00000004049 2518 2.215 - 0.702 - - - - - 0.748 0.765 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
8. prpsap2 ENSDARG00000019326 1463 2.185 - 0.744 - - - - - 0.741 0.700 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
9. kdm6bb ENSDARG00000056929 4807 1.85 - 0.884 - 0.966 - - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
10. si:ch211-155e24.3 ENSDARG00000105127 972 1.803 - - - 0.975 - - 0.828 - - si:ch211-155e24.3 [Source:ZFIN;Acc:ZDB-GENE-070912-116]
11. pax6a ENSDARG00000103379 3061 1.784 - - - 0.983 - - - 0.801 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
12. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.75 - - - 0.963 - - - 0.787 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
13. PPP1R8 PPP1R8 1897 1.72 - - - 0.976 - 0.744 - - -
14. nup98 ENSDARG00000074955 3998 1.712 - - - 0.976 - 0.736 - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
15. dkc1 ENSDARG00000016484 7088 1.696 - - - 0.948 - - 0.748 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
16. myeov2 3351 1.693 - - - 0.963 - - 0.730 - - myeloma overexpressed 2
17. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.679 - - - - - - - 0.900 0.779 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
18. mxd3 ENSDARG00000098350 3040 1.673 - - - 0.968 - - - - 0.705 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
19. arpp19b ENSDARG00000039880 4823 1.672 - - - 0.953 - - - - 0.719 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
20. emc3 ENSDARG00000020607 3406 1.665 - - - 0.959 - - 0.706 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
21. pa2g4b ENSDARG00000070657 7999 1.652 - 0.716 - 0.936 - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
22. ANKRD11 ENSDARG00000051886 10024 1.651 - 0.723 - 0.928 - - - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
23. psmg3 ENSDARG00000098391 920 1.645 - - - - - - 0.905 0.740 - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
24. grk4_1 ENSDARG00000070448 511 1.625 - 0.778 - - - - 0.847 - - G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
25. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.607 - - - - - - - 0.810 0.797 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
26. prkcbp1l ENSDARG00000011932 2714 1.599 - - - - - - 0.827 0.772 - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
27. vangl2 ENSDARG00000027397 2418 1.598 0.786 - - - - - 0.812 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
28. tox ENSDARG00000032317 9126 1.597 - 0.815 - - - - - - 0.782 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
29. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.595 - - - - - - 0.895 0.700 - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
30. pmepa1 ENSDARG00000039325 652 1.59 - - - - - - 0.848 0.742 - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
31. scaf4a ENSDARG00000077093 2408 1.587 - 0.808 - - - - 0.779 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
32. ldb1a ENSDARG00000010137 3035 1.585 - - - - - - - 0.841 0.744 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
33. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.578 - - - - - - 0.861 - 0.717 serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
34. whsc1 1701 1.572 - - - - - - 0.822 - 0.750 Wolf-Hirschhorn syndrome candidate 1
35. ubr7 ENSDARG00000005536 1108 1.565 - - - - - 0.753 0.812 - - ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]
36. pcdh19 ENSDARG00000034344 2378 1.559 - - - - - - - 0.811 0.748 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
37. rap2ip rap2ip 681 1.558 - - - - - - - 0.833 0.725
38. sf3a1 ENSDARG00000041887 6702 1.554 - - - - - - 0.808 - 0.746 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
39. zgc:101846 15202 1.544 - - - 0.821 - - - - 0.723 zgc:101846
40. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.544 - - - - - - 0.789 0.755 - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
41. hdac1 ENSDARG00000015427 19804 1.541 - - - 0.797 - - - - 0.744 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
42. si:ch211-166e11.5 ENSDARG00000100407 576 1.536 - 0.746 - - - - 0.790 - - si:ch211-166e11.5 [Source:ZFIN;Acc:ZDB-GENE-070912-142]
43. zbtb18 ENSDARG00000028228 3653 1.534 - - - - - - - 0.764 0.770 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
44. ezh2 ENSDARG00000010571 3273 1.525 - - 0.733 - - - - - 0.792 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
45. aif1l ENSDARG00000009336 1340 1.524 - - 0.719 - - - - 0.805 - allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
46. smarca5 ENSDARG00000052348 15433 1.523 - - - - - - 0.740 - 0.783 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
47. r3hdm1 ENSDARG00000101458 5241 1.517 - - - - - - 0.799 - 0.718 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
48. si:ch211-10a23.2 ENSDARG00000060656 471 1.515 - - - - - - - 0.790 0.725 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
49. mta2 ENSDARG00000013031 2932 1.515 - 0.734 - - - - - 0.781 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
50. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.507 - - - - - - 0.784 - 0.723 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
51. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.506 - - - - - - - 0.778 0.728 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
52. inip ENSDARG00000028523 1925 1.505 0.725 - - - - - - - 0.780 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
53. nbeaa ENSDARG00000070080 862 1.5 - - - - - - - 0.722 0.778 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
54. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.5 - - - - - - - 0.721 0.779 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
55. SNRPG ENSDARG00000099667 18697 1.498 - - - - - - 0.721 - 0.777 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
56. HIPK1_1 HIPK1_1 8096 1.496 - - - - - - 0.794 - 0.702
57. si:ch211-288g17.3 ENSDARG00000070959 2425 1.494 0.736 0.758 - - - - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
58. pou3f2a ENSDARG00000070220 817 1.489 - - - - - - - 0.787 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
59. ankzf1 ENSDARG00000041904 917 1.487 - 0.747 - - - - 0.740 - - ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
60. morc2 ENSDARG00000028539 3259 1.486 - 0.710 - - - - 0.776 - - MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
61. wu:fc51f04 wu:fc51f04 7074 1.483 - - - - - - - 0.736 0.747
62. hmgb2b ENSDARG00000053990 11519 1.479 - - - - - - 0.717 - 0.762 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
63. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.476 - 0.726 - - - - 0.750 - - phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
64. exosc5 ENSDARG00000040557, ENSDARG00000113276 727 1.475 - 0.764 - - - - 0.711 - - exosome component 5 [Source:ZFIN;Acc:ZDB-GENE-060503-675]
65. brd1b ENSDARG00000051798 1712 1.474 - - - - - - 0.759 - 0.715 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
66. slbp ENSDARG00000100558 3405 1.473 - - 0.757 - - - - 0.716 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
67. ruvbl2 ENSDARG00000055639, ENSDARG00000115705 890 1.468 - - - - - - 0.725 0.743 - RuvB-like AAA ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-030109-1]
68. syt11b ENSDARG00000056105 578 1.467 - - - - - - 0.733 0.734 - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
69. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 1.466 - 0.757 - - - - 0.709 - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
70. arhgef2 ENSDARG00000075819 2173 1.465 - - - - - - - 0.742 0.723 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
71. cxxc4 ENSDARG00000077817 197 1.464 - - - - - - - 0.748 0.716 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
72. sh3pxd2b ENSDARG00000103251 1469 1.462 - 0.722 - - - 0.740 - - - SH3 and PX domains 2B [Source:ZFIN;Acc:ZDB-GENE-060810-52]
73. ATF6B 960 1.46 - - - - - - 0.745 0.715 - activating transcription factor 6 beta
74. DSCAML1 ENSDARG00000098057 321 1.46 - 0.759 - - - - - 0.701 - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
75. parp1 ENSDARG00000019529 6787 1.459 - - 0.742 - - - - - 0.717 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
76. TAF15 ENSDARG00000070019 5102 1.458 - - - - - - - 0.734 0.724 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
77. cdk6 ENSDARG00000070228 1778 1.457 - - - - - - - 0.735 0.722 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
78. srfbp1 ENSDARG00000075323 2262 1.456 - - - - - - 0.713 0.743 - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
79. dhx38 ENSDARG00000100013 1854 1.454 - 0.703 - - - - - 0.751 - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
80. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.45 - - 0.703 - - - - - 0.747 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
81. rtca ENSDARG00000002215 3558 1.45 - - - - - - - 0.732 0.718 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
82. fam60al_1 949 1.449 - - - - - - 0.727 0.722 - family with sequence similarity 60, member A, like
83. ercc1 ENSDARG00000031680 900 1.446 - 0.731 - - - - 0.715 - - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
84. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 1.445 - 0.705 - - - - 0.740 - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
85. RLTPR 1158 1.444 - 0.732 - - - - - 0.712 - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
86. wu:fb54a03 wu:fb54a03 1722 1.441 - - - - - - 0.714 0.727 -
87. anp32a ENSDARG00000006487 28249 1.439 - - - 0.734 - - - 0.705 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
88. ppp1cc 2361 1.438 - - - - - 0.702 0.736 - - protein phosphatase 1, catalytic subunit, gamma isozyme
89. foxo3a ENSDARG00000023058 2554 1.435 - - - - - - 0.718 - 0.717 forkhead box O3A [Source:ZFIN;Acc:ZDB-GENE-050116-1]
90. lphn3.1 lphn3.1 756 1.431 - - - - - - - 0.722 0.709
91. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.43 - - 0.707 - - - - - 0.723 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
92. rbm25 rbm25 3629 1.429 - 0.717 - - - - - - 0.712
93. lypla2 ENSDARG00000053656 8971 1.426 - 0.723 - - - - - - 0.703 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
94. kmt2cb ENSDARG00000075560 4816 1.418 - 0.717 - - - - 0.701 - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
95. aebp2 ENSDARG00000006038 462 1.418 - 0.705 - - - - - 0.713 - AE binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2885]
96. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.413 - - - - - - - 0.710 0.703 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
97. polr2a ENSDARG00000099966 5706 1.41 - - 0.702 - - - 0.708 - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
98. cdc34b ENSDARG00000012627 3879 0.988 - - - 0.988 - - - - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
99. kif3b ENSDARG00000101120 1158 0.984 - - - 0.984 - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
100. rbbp6 ENSDARG00000037919 4813 0.984 - - - 0.984 - - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]

There are 1256 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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