Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:109889

Gene Name Gene ID Reads Annotation
zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]










Genes with expression patterns similar to zgc:109889

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
2. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 4.12 0.791 - - - - 0.913 0.847 0.786 0.783 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
3. fzd3a ENSDARG00000021664 1958 4.054 0.766 0.762 - - - 0.856 0.870 - 0.800 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
4. tuba1c ENSDARG00000055216 8384 3.993 0.716 - - - - 0.878 0.850 0.726 0.823 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
5. her4.3 ENSDARG00000070770 613 3.988 0.831 - - - - 0.758 0.783 0.876 0.740 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
6. gap43 ENSDARG00000099744 4114 3.917 0.737 - - - - 0.805 0.873 0.751 0.751 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
7. tmem35 ENSDARG00000052567 5685 3.795 0.719 - - - - 0.704 0.848 0.721 0.803 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
8. fez1 ENSDARG00000023174 701 3.346 - - - - - 0.903 0.798 0.914 0.731 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
9. UBE2QL1 ENSDARG00000079276 3474 3.336 0.930 - - - - 0.780 0.882 0.744 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
10. bhlhe22 ENSDARG00000058039 1673 3.331 0.811 - - - - 0.841 0.824 0.855 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
11. mllt11 ENSDARG00000071026 2518 3.321 - - - - - 0.902 0.815 0.820 0.784 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
12. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 3.307 - - - - - 0.804 0.906 0.819 0.778 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
13. negr1 ENSDARG00000021607 1051 3.278 0.768 - - - - 0.852 0.909 - 0.749 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
14. st18 663 3.273 - - - - - 0.829 0.809 0.840 0.795 suppression of tumorigenicity 18, zinc finger
15. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 3.264 - - - - - 0.874 0.805 0.842 0.743 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
16. fgf13b ENSDARG00000056633 455 3.257 0.908 - - - - 0.817 0.746 0.786 - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
17. amph ENSDARG00000007663 599 3.253 0.719 - - - - 0.885 0.861 0.788 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
18. marcksa ENSDARG00000004049 2518 3.224 - - - - - 0.757 0.855 0.836 0.776 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
19. rtn1b ENSDARG00000021143 1682 3.214 0.743 - - - - 0.882 0.872 - 0.717 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
20. dpysl4 ENSDARG00000103490 534 3.204 0.732 - - - - - 0.815 0.863 0.794 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
21. celf3a ENSDARG00000034668 2432 3.197 - - - - - 0.821 0.738 0.810 0.828 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
22. celf4 ENSDARG00000070045 1537 3.161 0.743 - - - - 0.752 0.817 0.849 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
23. stmn1b ENSDARG00000033655 9491 3.161 0.783 - - - - 0.810 0.853 0.715 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
24. dpysl5a ENSDARG00000011141 1827 3.158 0.727 - - - - 0.788 0.884 - 0.759 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
25. ZFHX3 ENSDARG00000103057 7759 3.149 0.815 - - - - 0.726 0.849 0.759 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
26. C7H4orf48 C7H4orf48 1455 3.144 0.706 - - - - 0.848 0.837 0.753 -
27. sprn ENSDARG00000056004 128 3.136 - - - - - 0.851 0.710 0.830 0.745 shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
28. rap2ip rap2ip 681 3.135 - - - - - 0.835 0.819 0.750 0.731
29. clvs2 ENSDARG00000053122 1390 3.11 0.707 - - - - - 0.815 0.887 0.701 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
30. fam60al 2846 3.1 0.761 - - - - 0.737 0.762 0.840 - family with sequence similarity 60, member A, like
31. si:dkey-238f9.1 ENSDARG00000079446 51 3.093 0.764 - - - - 0.871 0.746 0.712 - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
32. SLC22A23_1 SLC22A23_1 308 3.045 - 0.752 - - - - 0.701 0.799 0.793
33. tuba2 ENSDARG00000045014 1490 2.986 0.725 - - - - 0.717 0.805 - 0.739 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
34. rexo1 ENSDARG00000026986 770 2.934 0.734 0.750 - - - - 0.703 0.747 - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
35. nr4a2a ENSDARG00000017007 140 2.922 0.740 - - - - - 0.716 0.722 0.744 nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
36. adam23a ENSDARG00000062323 580 2.685 0.891 - - - - 0.972 0.822 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
37. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.656 - - - - - 0.878 0.860 0.918 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
38. scrt2 ENSDARG00000056175 4331 2.645 0.896 - - - - 0.923 0.826 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
39. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.62 0.865 - - - - 0.927 0.828 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
40. pax6a ENSDARG00000103379 3061 2.6 - - - - - 0.885 0.822 0.893 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
41. msi1 ENSDARG00000010710 2634 2.583 0.898 - - - - 0.802 0.883 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
42. gabra5 ENSDARG00000070730 156 2.573 0.886 - - - - 0.841 0.846 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
43. sv2bb ENSDARG00000060711 196 2.562 0.930 - - - - 0.749 0.883 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
44. fam219ab ENSDARG00000013813 591 2.56 - - - - - 0.863 0.901 0.796 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
45. pcdh1gc5 ENSDARG00000104826 10052 2.543 0.806 - - - - 0.873 0.864 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
46. kcnc3a ENSDARG00000055855 1821 2.541 0.744 - - - - 0.946 0.851 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
47. dnajc5aa ENSDARG00000042948 2885 2.533 0.798 - - - - 0.841 0.894 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
48. stmn4l ENSDARG00000043932 654 2.532 0.831 - - - - 0.956 0.745 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
49. gng3 ENSDARG00000009553 2530 2.513 0.825 - - - - 0.837 0.851 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
50. pou3f2a ENSDARG00000070220 817 2.513 - - - - - - 0.894 0.838 0.781 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
51. slc1a3a ENSDARG00000104431 9888 2.512 0.774 - - - - 0.862 0.876 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
52. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.508 0.780 - - - - 0.864 0.864 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
53. cers6 ENSDARG00000053583 247 2.504 0.807 - - - - 0.884 0.813 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
54. LMTK3 LMTK3 222 2.503 0.851 - - - - - 0.830 0.822 -
55. cldn19 ENSDARG00000044569 281 2.502 0.892 - - - - 0.839 0.771 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
56. cspg5a ENSDARG00000069981 1699 2.492 0.886 - - - - 0.740 0.866 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
57. slc8a2b ENSDARG00000100592 598 2.482 0.800 - - - - 0.812 0.870 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
58. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.481 - - - - - 0.735 0.859 0.887 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
59. ntrk2a ENSDARG00000059897 185 2.479 0.808 - - - - 0.831 0.840 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
60. AGO1 ENSDARG00000092644 4521 2.478 0.849 - - - - 0.757 0.872 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
61. adcyap1b ENSDARG00000027740 1539 2.473 - - - - - 0.845 0.815 0.813 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
62. CABZ01111990.1 CABZ01111990.1 4374 2.465 - - - - - 0.735 0.869 0.861 -
63. CR847998.1 ENSDARG00000104784 518 2.465 0.738 - - - - 0.876 0.851 - -
64. ckbb ENSDARG00000043257 3503 2.464 0.775 - - - - 0.896 0.793 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
65. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.462 - - - - - 0.912 0.844 - 0.706 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
66. stx1b ENSDARG00000000503 2724 2.459 0.710 - - - - 0.901 0.848 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
67. MAPK8IP1_1 MAPK8IP1_1 186 2.458 0.748 - - - - 0.920 0.790 - -
68. nlgn3b ENSDARG00000062376 171 2.456 0.871 - - - - 0.759 0.826 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
69. EPB41L1 EPB41L1 1896 2.454 0.826 - - - - 0.831 0.797 - -
70. itm2ca ENSDARG00000043448 1265 2.447 - - - - - 0.921 0.817 0.709 - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
71. dpysl3 ENSDARG00000002587 4381 2.444 - - - - - 0.831 0.877 - 0.736 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
72. her4.1 ENSDARG00000056732 1264 2.444 - - - - - 0.865 0.794 0.785 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
73. lhx1a ENSDARG00000014018 958 2.444 - - - - - 0.933 0.762 - 0.749 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
74. SNAP91 ENSDARG00000098809 556 2.442 - - - - - 0.911 0.814 0.717 - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
75. add2 ENSDARG00000074581 1402 2.44 - - - - - 0.749 0.884 0.807 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
76. rab3ab ENSDARG00000043835 1267 2.439 0.713 - - - - 0.891 0.835 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
77. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.439 0.859 - - - - 0.775 - 0.805 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
78. mapk12b ENSDARG00000006409 2246 2.438 0.768 - - - - 0.784 0.886 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
79. plekho1a ENSDARG00000061191 98 2.436 0.941 - - - - 0.781 0.714 - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
80. lhx5 ENSDARG00000057936 785 2.435 - - - - - 0.872 0.761 0.802 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
81. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.435 0.755 - - - - 0.853 0.827 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
82. nbeaa ENSDARG00000070080 862 2.433 - - - - - - 0.876 0.804 0.753 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
83. zbtb18 ENSDARG00000028228 3653 2.431 - - - - - 0.765 - 0.883 0.783 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
84. snap25a ENSDARG00000020609 4537 2.43 0.709 - - - - 0.931 0.790 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
85. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.43 0.876 - - - - 0.741 0.813 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
86. gfap ENSDARG00000025301 5584 2.429 0.717 - - - - 0.857 0.855 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
87. PRKAR2B ENSDARG00000036446 812 2.424 - - - - - 0.770 0.819 0.835 - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
88. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.423 0.794 - - - - 0.758 0.871 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
89. phactr3a ENSDARG00000058243 150 2.422 0.764 - - - - 0.805 0.853 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
90. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.419 - - - - - 0.839 0.824 0.756 -
91. nmnat2 ENSDARG00000004580 370 2.416 0.745 - - - - 0.850 0.821 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
92. si:dkey-25e11.10 si:dkey-25e11.10 955 2.415 0.736 - - - - 0.818 0.861 - -
93. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.414 0.768 - - - - 0.763 0.883 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
94. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.413 0.724 - - - - 0.911 0.778 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
95. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.411 0.788 - - - - 0.772 0.851 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
96. TUSC5 TUSC5 1436 2.411 0.741 - - - - 0.863 0.807 - -
97. rcor2 ENSDARG00000008278 1678 2.408 - - - - - 0.784 0.799 0.825 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
98. ctnnd2b ENSDARG00000003779 964 2.407 - - - - - 0.782 0.923 - 0.702 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
99. lhfpl4a ENSDARG00000111810 206 2.405 0.798 - - - - - 0.809 0.798 - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
100. AKT3 AKT3 1729 2.401 - 0.702 - - - 0.841 0.858 - -

There are 2069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA