Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zer1

Gene Name Gene ID Reads Annotation
zer1 ENSDARG00000105123 682 zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]










Genes with expression patterns similar to zer1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zer1 ENSDARG00000105123 682 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]
2. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 2.303 0.786 0.805 - - - - - - 0.712 ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
3. BX897684.1 BX897684.1 636 1.668 0.789 0.879 - - - - - - -
4. DTX3 DTX3 303 1.666 0.860 0.806 - - - - - - -
5. mir130b 180 1.65 0.823 0.827 - - - - - - - microRNA 130b
6. CU929356.4 CU929356.4 86 1.624 0.799 0.825 - - - - - - -
7. CREB3L3 CREB3L3 24 1.59 0.799 0.791 - - - - - - -
8. ENSDARG00000089986 ENSDARG00000089986 308 1.582 0.813 - - - - - 0.769 - -
9. TAPT1 TAPT1 1165 1.573 0.771 0.802 - - - - - - -
10. RNF219 ENSDARG00000090904 176 1.553 0.708 0.845 - - - - - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
11. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1.547 0.786 0.761 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
12. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.54 0.786 0.754 - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
13. lcmt1 ENSDARG00000045140, ENSDARG00000111263 413 1.531 0.717 0.814 - - - - - - - leucine carboxyl methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-75]
14. wu:fj30f06 480 1.523 - 0.775 - - - - - - 0.748 wu:fj30f06, transcript variant X1
15. zgc:113443 359 1.507 0.794 0.713 - - - - - - - zgc:113443, transcript variant X3
16. tefb ENSDARG00000098103 370 1.501 - 0.758 - - - - 0.743 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
17. tmem205 ENSDARG00000100677 101 1.486 - 0.764 - - - - 0.722 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
18. alas1 ENSDARG00000021059 4892 1.484 - 0.735 - - - 0.749 - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
19. ralgps2 ENSDARG00000026519 1610 1.482 - 0.769 - - - - 0.713 - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
20. psmd4b ENSDARG00000023279 2002 1.479 - - - - - - 0.768 - 0.711 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
21. BDP1_1 BDP1_1 317 1.468 - 0.729 - - - - - - 0.739
22. zgc:136763 zgc:136763 190 1.468 0.740 0.728 - - - - - - -
23. gnb1a ENSDARG00000090454 481 1.461 - - - - - 0.707 0.754 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
24. CABZ01057907.1 CABZ01057907.1 1140 1.46 0.716 - - - - - 0.744 - -
25. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 1.442 - 0.713 - - - - 0.729 - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
26. guk1a ENSDARG00000030340 517 1.417 - 0.707 - - - - 0.710 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
27. gorab ENSDARG00000042031 483 1.413 0.703 0.710 - - - - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
28. ehmt1a ENSDARG00000068157 855 0.919 - 0.919 - - - - - - - euchromatic histone-lysine N-methyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-44]
29. rab6bb ENSDARG00000031343 1381 0.914 - 0.914 - - - - - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
30. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 0.913 - 0.913 - - - - - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
31. tmem39a ENSDARG00000102746 900 0.911 - 0.911 - - - - - - - transmembrane protein 39A [Source:ZFIN;Acc:ZDB-GENE-030131-1928]
32. rn7sk ENSDARG00000081270 149 0.903 - 0.903 - - - - - - - RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
33. dvl1b ENSDARG00000055552 146 0.899 0.899 - - - - - - - - dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
34. tbx3a ENSDARG00000002216 2270 0.897 - 0.897 - - - - - - - T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]
35. CEP152 ENSDARG00000075725 391 0.896 - 0.896 - - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
36. sft2d3 ENSDARG00000070284 351 0.894 - 0.894 - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
37. ppardb ENSDARG00000009473 1601 0.892 - 0.892 - - - - - - - peroxisome proliferator-activated receptor delta b [Source:ZFIN;Acc:ZDB-GENE-000112-47]
38. wdr59 ENSDARG00000088817 1005 0.891 - 0.891 - - - - - - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
39. flot1a ENSDARG00000001710 36 0.888 0.888 - - - - - - - - flotillin 1a [Source:ZFIN;Acc:ZDB-GENE-020430-1]
40. fam134c fam134c 1550 0.888 - 0.888 - - - - - - -
41. KCTD9 KCTD9 147 0.887 0.887 - - - - - - - -
42. smarcad1 smarcad1 1457 0.887 - 0.887 - - - - - - -
43. ADAMTS16 ENSDARG00000074646 277 0.885 - 0.885 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 16 [Source:ZFIN;Acc:ZDB-GENE-130530-760]
44. fam49bb ENSDARG00000045417 513 0.885 - 0.885 - - - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
45. cldna ENSDARG00000069888 712 0.885 0.885 - - - - - - - - claudin a [Source:ZFIN;Acc:ZDB-GENE-010328-1]
46. cep70 ENSDARG00000076965 140 0.884 0.884 - - - - - - - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
47. si:ch211-194k22.8 ENSDARG00000096711 1318 0.883 - 0.883 - - - - - - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
48. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 0.88 - 0.880 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
49. dpm2 ENSDARG00000095623, ENSDARG00000115283 981 0.879 - 0.879 - - - - - - - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9093]
50. plekhj1 ENSDARG00000025593 696 0.879 - 0.879 - - - - - - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
51. arhgap27 ENSDARG00000104255 439 0.878 - 0.878 - - - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
52. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 0.877 - 0.877 - - - - - - - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
53. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 0.877 - 0.877 - - - - - - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
54. HPX ENSDARG00000012609 781 0.874 0.874 - - - - - - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
55. cybb ENSDARG00000056615 177 0.874 0.874 - - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
56. METRNL 166 0.872 0.872 - - - - - - - - meteorin, glial cell differentiation regulator-like
57. becn1 ENSDARG00000079128 581 0.872 - 0.872 - - - - - - - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
58. rab20 ENSDARG00000005049 346 0.871 - 0.871 - - - - - - - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
59. TMTC2 TMTC2 478 0.871 - 0.871 - - - - - - -
60. C16H1orf172 C16H1orf172 909 0.871 - 0.871 - - - - - - -
61. SLC17A7 SLC17A7 1226 0.871 - 0.871 - - - - - - -
62. ppm1aa ENSDARG00000032155 1039 0.87 - - - - - - 0.870 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
63. si:dkeyp-33e11.3 si:dkeyp-33e11.3 306 0.869 - 0.869 - - - - - - -
64. med14 ENSDARG00000009953 1383 0.867 - 0.867 - - - - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
65. tmem19 414 0.866 - 0.866 - - - - - - - transmembrane protein 19
66. im:7160159 im:7160159 294 0.866 - 0.866 - - - - - - -
67. RPS6KC1 ENSDARG00000104103 746 0.866 - 0.866 - - - - - - - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
68. SPAG5 SPAG5 1117 0.866 - 0.866 - - - - - - -
69. rad23b ENSDARG00000021550 2575 0.865 - 0.865 - - - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
70. cnot10 ENSDARG00000058528 478 0.864 - 0.864 - - - - - - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
71. wdr45 ENSDARG00000090219 829 0.863 - 0.863 - - - - - - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
72. znf511 ENSDARG00000000760 446 0.862 - 0.862 - - - - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
73. thtpa ENSDARG00000063049 286 0.862 0.862 - - - - - - - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
74. psmf1 ENSDARG00000022652 527 0.862 - 0.862 - - - - - - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
75. ccdc9 ENSDARG00000004636 912 0.861 - 0.861 - - - - - - - coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]
76. MALSU1 MALSU1 1251 0.861 - - - - - - 0.861 - -
77. ift172 ENSDARG00000041870 1239 0.86 - 0.860 - - - - - - - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
78. ccnf ENSDARG00000105046 1790 0.86 - 0.860 - - - - - - - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
79. paplnb ENSDARG00000042186 18 0.86 - 0.860 - - - - - - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
80. cby1 ENSDARG00000077409, ENSDARG00000113018 772 0.859 - 0.859 - - - - - - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
81. C8H9orf3 C8H9orf3 414 0.858 - 0.858 - - - - - - -
82. sptlc2a ENSDARG00000018976 937 0.858 0.858 - - - - - - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
83. trmu ENSDARG00000043734 291 0.857 - 0.857 - - - - - - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-540]
84. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 0.855 - 0.855 - - - - - - -
85. CR382385.2 ENSDARG00000115992 353 0.854 - 0.854 - - - - - - -
86. orc3 ENSDARG00000008805 444 0.854 - 0.854 - - - - - - - origin recognition complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6247]
87. coq2 ENSDARG00000059510 505 0.853 - 0.853 - - - - - - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
88. si:ch73-96b22.1 si:ch73-96b22.1 393 0.853 - 0.853 - - - - - - -
89. mbip ENSDARG00000019364 238 0.853 - 0.853 - - - - - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
90. tmem206 ENSDARG00000012271 508 0.851 - 0.851 - - - - - - - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
91. CECR2 ENSDARG00000078310 903 0.85 - - - - - - 0.850 - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
92. fer ENSDARG00000012196 83 0.849 0.849 - - - - - - - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
93. rusc2 ENSDARG00000095288 649 0.849 - 0.849 - - - - - - - RUN and SH3 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-131]
94. pnpla8 ENSDARG00000078745 326 0.848 - 0.848 - - - - - - - patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]
95. gsto2 ENSDARG00000033285 583 0.848 0.848 - - - - - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
96. MIER3_1 MIER3_1 756 0.848 - 0.848 - - - - - - -
97. si:dkey-17e16.17 615 0.848 - 0.848 - - - - - - - si:dkey-17e16.17
98. alx4a ENSDARG00000088332 895 0.848 - 0.848 - - - - - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
99. gmnn ENSDARG00000035957, ENSDARG00000113743 682 0.847 - 0.847 - - - - - - - geminin, DNA replication inhibitor [Source:ZFIN;Acc:ZDB-GENE-030429-30]
100. efna3b ENSDARG00000098295 319 0.847 - 0.847 - - - - - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]

There are 1095 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA