Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zcrb1

Gene Name Gene ID Reads Annotation
zcrb1 ENSDARG00000045691 1741 zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]










Genes with expression patterns similar to zcrb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zcrb1 ENSDARG00000045691 1741 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]
2. dpp3 ENSDARG00000020676 2393 1.842 - 0.906 - - - - - - 0.936 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
3. timm10 ENSDARG00000069116 4459 1.724 - - - - - - 0.860 - 0.864 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
4. nap1l4b ENSDARG00000068868 3285 1.713 - - - - - - 0.802 - 0.911 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
5. arl14ep ENSDARG00000001210 3029 1.696 - 0.763 - - - - - - 0.933 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
6. pof1b ENSDARG00000054060 2355 1.692 - 0.773 - - - - - - 0.919 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
7. CU695232.1 ENSDARG00000098286 1266 1.689 - - - - - - - 0.752 0.937 zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
8. lmo2 ENSDARG00000095019 1098 1.686 - - - - - - 0.752 - 0.934 LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
9. gstm3 gstm3 1164 1.686 - - - - 0.748 - - - 0.938
10. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.68 - 0.739 - - - - - - 0.941 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
11. frmd6 ENSDARG00000002332 2698 1.66 - - - - - - 0.700 - 0.960 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
12. nup188 ENSDARG00000030022 2398 1.659 - - - - - 0.726 - - 0.933 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
13. etv2 ENSDARG00000053868 715 1.655 - - - - - - 0.715 - 0.940 ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
14. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 1.652 - - - - - - - 0.716 0.936 transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
15. nr1d4b ENSDARG00000059370 243 1.648 - - - - - - 0.708 - 0.940 nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
16. fastk ENSDARG00000077075 1619 1.641 - - - - - - - 0.712 0.929 Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
17. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.631 - - - - - - 0.712 - 0.919 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
18. nudcd1 ENSDARG00000036158 608 1.625 - 0.817 - - - - - 0.808 - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
19. ptpn13 ENSDARG00000103699 2866 1.615 - - - - 0.725 - - - 0.890 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
20. cnot8 ENSDARG00000020043 866 1.613 - 0.842 - - - - - 0.771 - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
21. fli1b ENSDARG00000040080 348 1.587 - 0.828 - - - - - 0.759 - Fli-1 proto-oncogene, ETS transcription factor b [Source:ZFIN;Acc:ZDB-GENE-031114-3]
22. DAGLB ENSDARG00000089888 304 1.568 - - - - 0.771 - - 0.797 - diacylglycerol lipase, beta [Source:ZFIN;Acc:ZDB-GENE-070619-2]
23. ube2w ENSDARG00000044923 438 1.565 - 0.796 - - - - - 0.769 - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
24. si:ch211-85n16.3 ENSDARG00000096346 1095 1.56 - - - - - - 0.781 - 0.779 si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
25. rpp14 ENSDARG00000011152 524 1.554 - - - - 0.766 - 0.788 - - ribonuclease P/MRP 14 subunit [Source:ZFIN;Acc:ZDB-GENE-050522-182]
26. psmg3 ENSDARG00000098391 920 1.548 - 0.811 - - - - - 0.737 - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
27. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 1.542 - - - 0.773 - 0.769 - - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
28. casp9 ENSDARG00000004325 306 1.542 - - - - 0.751 - - 0.791 - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
29. si:ch211-134c9.2 ENSDARG00000095593 86 1.537 - - - - 0.765 - - 0.772 - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
30. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.532 - - - - 0.730 - - 0.802 - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
31. zgc:65772 zgc:65772 2092 1.527 - - - - - 0.825 0.702 - -
32. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.521 - - - - - 0.812 0.709 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
33. DTX3 DTX3 303 1.518 - - - - 0.783 - - 0.735 -
34. wipi2 ENSDARG00000037871 425 1.517 - - - - - 0.711 - 0.806 - WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
35. CR450842.1 CR450842.1 129 1.516 - 0.738 - - 0.778 - - - -
36. si:ch211-117m20.5 ENSDARG00000091996 7246 1.515 - - - - 0.789 - - 0.726 - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
37. BX950186.2 BX950186.2 1267 1.509 - - - - - 0.755 0.754 - -
38. si:dkeyp-118b1.2 ENSDARG00000079131 705 1.505 - - - - - 0.718 0.787 - - si:dkeyp-118b1.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7685]
39. mus81 ENSDARG00000069326, ENSDARG00000111800 400 1.498 - - - - 0.788 0.710 - - - MUS81 structure-specific endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2923]
40. ubp1 ENSDARG00000018000 1047 1.492 - - - - 0.776 - 0.716 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
41. CU074314.1 CU074314.1 354 1.491 - 0.721 - - - - - 0.770 -
42. elmo1 ENSDARG00000098753 6966 1.491 - 0.710 - - - - - - 0.781 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
43. ndufaf6 ENSDARG00000053652 351 1.481 - 0.702 - - - - 0.779 - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-100112-1]
44. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.48 - - - - - - 0.708 0.772 - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
45. vars ENSDARG00000044575 1367 1.472 - - - - - 0.724 0.748 - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
46. pigt ENSDARG00000075842 210 1.471 - 0.758 - - - - 0.713 - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
47. vapal ENSDARG00000115862 3108 1.46 - - - - - 0.715 0.745 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
48. aspm ENSDARG00000103754 5708 1.459 - - - - - - 0.723 - 0.736 abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
49. nucks1b ENSDARG00000012777 4468 1.455 - - - - 0.702 - 0.753 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
50. hoxd10a ENSDARG00000057859 1498 1.446 - - - - - 0.726 0.720 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
51. psmb2 ENSDARG00000031511 4016 1.443 - - - - - - 0.732 - 0.711 proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
52. zgc:114119 ENSDARG00000098992 1090 1.441 - - - - - - 0.728 0.713 - zgc:114119 [Source:ZFIN;Acc:ZDB-GENE-050913-56]
53. crfb6 1137 1.437 - - - - - - 0.704 0.733 - cytokine receptor family member b6
54. pagr1 ENSDARG00000076966 1430 1.43 - - - 0.703 - - 0.727 - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
55. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.43 - - - - - 0.702 0.728 - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
56. u2af2b ENSDARG00000011740 6946 1.421 - - - - - 0.710 0.711 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
57. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.407 - - - - - - 0.703 0.704 - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
58. TTBK2_1 TTBK2_1 649 1.403 - - - - - 0.702 0.701 - -
59. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 0.987 - - - - - - - - 0.987 family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
60. srebf2 ENSDARG00000063438 1982 0.985 - - - - - - - - 0.985 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
61. zgc:101640 733 0.982 - - - - - - - - 0.982 zgc:101640, transcript variant X2
62. scaf11 ENSDARG00000045885 3531 0.978 - - - - - - - - 0.978 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
63. brox ENSDARG00000013659 1334 0.978 - - - - - - - - 0.978 BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
64. dsc2l ENSDARG00000039677 2747 0.974 - - - - - - - - 0.974 desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
65. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 0.972 - - - - - - - - 0.972 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
66. kpna3 ENSDARG00000052641 5347 0.962 - - - - - - - - 0.962 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
67. homer3 homer3 1974 0.942 - - - - - - - - 0.942
68. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.942 - - - - - - - - 0.942 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
69. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.942 - - - - - - - - 0.942 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
70. SENP7 SENP7 1097 0.941 - - - - - - - - 0.941
71. nol10 ENSDARG00000020077 984 0.941 - - - - - - - - 0.941 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
72. ptprfa ENSDARG00000103479 1250 0.941 - - - - - - - - 0.941 protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
73. bcl9 ENSDARG00000036687 1124 0.941 - - - - - - - - 0.941 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
74. syt4 ENSDARG00000036505 421 0.941 - - - - - - - - 0.941 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
75. si:ch73-109d9.1 ENSDARG00000052019 248 0.94 - - - - - - - - 0.940 si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
76. smad2 ENSDARG00000006389 646 0.94 - - - - - - - - 0.940 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
77. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 0.94 - - - - - - - - 0.940 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
78. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.94 - - - - - - - - 0.940 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
79. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.94 - - - - - - - - 0.940 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
80. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 0.94 - - - - - - - - 0.940 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
81. GPR108 ENSDARG00000096651 1734 0.94 - - - - - - - - 0.940 G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
82. plekhg5a ENSDARG00000025902 397 0.94 - - - - - - - - 0.940 pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
83. SURF2 ENSDARG00000112476 592 0.94 - - - - - - - - 0.940 surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
84. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.94 - - - - - - - - 0.940 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
85. PPP1R21 ENSDARG00000103144 385 0.939 - - - - - - - - 0.939 protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
86. KIF20B KIF20B 800 0.939 - - - - - - - - 0.939
87. tfdp1b ENSDARG00000016304 3071 0.939 - - - - - - - - 0.939 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
88. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.939 - - - - - - - - 0.939 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
89. pcloa ENSDARG00000063299 353 0.939 - - - - - - - - 0.939 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
90. ascc2 ENSDARG00000013058 228 0.939 - - - - - - - - 0.939 activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
91. ITPA ENSDARG00000057529 493 0.939 - - - - - - - - 0.939 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
92. CABZ01073417.1 CABZ01073417.1 232 0.939 - - - - - - - - 0.939
93. otub1a ENSDARG00000055536 2892 0.939 - - - - - - - - 0.939 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
94. TRMT10A ENSDARG00000036678 621 0.939 - - - - - - - - 0.939 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
95. entpd2a.2 ENSDARG00000033953 389 0.939 - - - - - - - - 0.939 ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
96. OTOS ENSDARG00000108475 180 0.939 - - - - - - - - 0.939 otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
97. eefsec ENSDARG00000004696 791 0.939 - - - - - - - - 0.939 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
98. wdr66 ENSDARG00000059855 276 0.939 - - - - - - - - 0.939 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
99. si:ch211-103e16.4 si:ch211-103e16.4 227 0.938 - - - - - - - - 0.938
100. BRK1 ENSDARG00000041974 6430 0.938 - - - - - - - - 0.938 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]

There are 1501 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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