Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zc3hc1

Gene Name Gene ID Reads Annotation
zc3hc1 ENSDARG00000062651 1552 zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]










Genes with expression patterns similar to zc3hc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zc3hc1 ENSDARG00000062651 1552 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
2. cebpg ENSDARG00000036073 3791 2.538 0.790 - - - - 0.749 0.999 - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
3. gid8b ENSDARG00000037589 2121 1.808 - - - - - 0.808 1.000 - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
4. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.779 - 0.865 - - - 0.914 - - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
5. ube2j1 ENSDARG00000033489 497 1.713 - 0.783 - - - 0.930 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
6. lxn ENSDARG00000043102 415 1.669 0.712 - - - - 0.957 - - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
7. THEM6_1 ENSDARG00000103914 469 1.658 - 0.759 - - - 0.899 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
8. cux1b ENSDARG00000043134 641 1.629 - 0.762 - - - 0.867 - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
9. rprd2b ENSDARG00000074676 809 1.621 0.811 0.810 - - - - - - - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
10. srek1ip1 ENSDARG00000043728 985 1.62 0.717 - - - - 0.903 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
11. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 1.611 0.714 - - - - 0.897 - - - general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
12. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 1.595 - - - - - 0.860 - 0.735 - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
13. itsn1 ENSDARG00000000086 684 1.592 - 0.711 - - - 0.881 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
14. adhfe1 ENSDARG00000053518 499 1.57 - 0.733 - - - 0.837 - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
15. U2_6 U2_6 1155 1.568 - 0.793 - - - 0.775 - - -
16. smg7 ENSDARG00000060767 2759 1.55 - 0.735 - - - 0.815 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
17. ttk ENSDARG00000041361 3911 1.55 - 0.702 - - - 0.848 - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
18. si:ch1073-95o12.1 si:ch1073-95o12.1 734 1.518 - 0.750 - - - 0.768 - - -
19. fgfr1op ENSDARG00000003058 449 1.516 - 0.770 - - - - - 0.746 - FGFR1 oncogene partner [Source:ZFIN;Acc:ZDB-GENE-090417-1]
20. trpm7 ENSDARG00000036232 925 1.481 - 0.748 - - - 0.733 - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
21. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 1 - - - - - - 1.000 - - RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
22. rbm14b ENSDARG00000103834 1597 1 - - - - - - 1.000 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
23. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 1 - - - - - - 1.000 - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
24. dap3 ENSDARG00000078500 2724 1 - - - - - - 1.000 - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
25. map2k4b ENSDARG00000077177 1869 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
26. TMEM255A ENSDARG00000073911 924 1 - - - - - - 1.000 - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
27. C18H12orf23 C18H12orf23 5362 1 - - - - - - 1.000 - -
28. smcr7a smcr7a 1356 1 - - - - - - 1.000 - -
29. gcdh gcdh 1390 1 - - - - - - 1.000 - -
30. shroom1 ENSDARG00000094181 2325 1 - - - - - - 1.000 - - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
31. dhps ENSDARG00000003270 827 1 - - - - - - 1.000 - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
32. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1 - - - - - - 1.000 - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
33. med1 ENSDARG00000075340 2421 1 - - - - - - 1.000 - - mediator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081104-257]
34. dcaf17 ENSDARG00000074909 913 1 - - - - - - 1.000 - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
35. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1 - - - - - - 1.000 - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
36. znf740 znf740 2458 1 - - - - - - 1.000 - -
37. wu:fj05h12 wu:fj05h12 6166 1 - - - - - - 1.000 - -
38. btbd3a ENSDARG00000005544 595 1 - - - - - - 1.000 - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
39. spred2a ENSDARG00000052435 1624 1 - - - - - - 1.000 - - sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
40. mapk14b ENSDARG00000028721 1486 1 - - - - - - 1.000 - - mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
41. LRIG3 ENSDARG00000079363 909 1 - - - - - - 1.000 - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
42. HECW1 HECW1 1531 1 - - - - - - 1.000 - -
43. kiaa0907 1674 1 - - - - - - 1.000 - - KIAA0907 protein, transcript variant X7
44. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1 - - - - - - 1.000 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
45. anxa11a ENSDARG00000077383 4076 0.999 - - - - - - 0.999 - - annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
46. BOLA2B BOLA2B 2957 0.999 - - - - - - 0.999 - -
47. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 0.999 - - - - - - 0.999 - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
48. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 0.999 - - - - - - 0.999 - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
49. dtna ENSDARG00000031015 1746 0.999 - - - - - - 0.999 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
50. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 0.999 - - - - - - 0.999 - - solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
51. MAF1 ENSDARG00000013122 6899 0.999 - - - - - - 0.999 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
52. ACVR2B 6615 0.999 - - - - - - 0.999 - - activin A receptor, type IIB
53. slc38a4 ENSDARG00000018149 2344 0.999 - - - - - - 0.999 - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
54. atp1a3a ENSDARG00000018259 5393 0.999 - - - - - - 0.999 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
55. nkd1 ENSDARG00000020053 4450 0.999 - - - - - - 0.999 - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
56. aplp1 ENSDARG00000098368 2317 0.999 - - - - - - 0.999 - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
57. G3BP2 ENSDARG00000014790 9380 0.998 - - - - - - 0.998 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
58. kpna2 ENSDARG00000038066 7954 0.998 - - - - - - 0.998 - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
59. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 0.998 - - - - - - 0.998 - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
60. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 0.997 - - - - - - 0.997 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
61. tmed2 ENSDARG00000026908 9070 0.997 - - - - - - 0.997 - - transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
62. dlb ENSDARG00000004232 5120 0.997 - - - - - - 0.997 - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
63. c8g ENSDARG00000032098 1368 0.997 - - - - - - 0.997 - - complement component 8, gamma polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1898]
64. her6 ENSDARG00000006514, ENSDARG00000111099 7477 0.997 - - - - - - 0.997 - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
65. atp5mf ENSDARG00000037867 11052 0.996 - - - - - - 0.996 - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
66. arf6a ENSDARG00000101626 2959 0.996 - - - - - - 0.996 - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
67. PCBP4 ENSDARG00000024276 3194 0.995 - - - - - - 0.995 - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
68. ucmab ENSDARG00000005485 1808 0.994 - - - - - - 0.994 - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
69. zgc:158387 zgc:158387 9147 0.994 - - - - - - 0.994 - -
70. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 0.993 - - - - - - 0.993 - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
71. ndufs3 ENSDARG00000015385 7790 0.992 - - - - - - 0.992 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
72. pcna ENSDARG00000054155 89521 0.99 - - - - - - 0.990 - - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
73. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 0.989 - - - - - - 0.989 - - proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
74. hif1ab ENSDARG00000034293 10284 0.989 - - - - - - 0.989 - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
75. ing4 ENSDARG00000030716 5908 0.989 - - - - - - 0.989 - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
76. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.989 - - - - - - 0.989 - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
77. CABZ01034848.1 CABZ01034848.1 9936 0.986 - - - - - - 0.986 - -
78. bzw1a ENSDARG00000010481 28451 0.986 - - - - - - 0.986 - - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
79. nr2f5 ENSDARG00000033172 11808 0.986 - - - - - - 0.986 - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
80. alyref ENSDARG00000077732 25934 0.985 - - - - - - 0.985 - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
81. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 0.984 - - - - - - 0.984 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
82. prtgb ENSDARG00000040442 12365 0.978 - - - - - - 0.978 - - protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
83. eif4g2b ENSDARG00000057167 22982 0.977 - - - - - - 0.977 - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
84. sri ENSDARG00000058593 13152 0.97 - - - - - - 0.970 - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
85. chchd6a ENSDARG00000003206 421 0.957 - - - - - 0.957 - - - coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-040930-2]
86. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.953 - - - - - 0.953 - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
87. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 0.951 - - - - - 0.951 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
88. CABZ01067945.1 CABZ01067945.1 469 0.949 - - - - - 0.949 - - -
89. capza1a ENSDARG00000034240 24012 0.947 - - - - - - 0.947 - - capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
90. si:ch211-251b21.1 ENSDARG00000007275 15724 0.946 - - - - - - 0.946 - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
91. prdm4 ENSDARG00000017366 454 0.946 - - - - - 0.946 - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
92. calm1b ENSDARG00000034187 13158 0.941 - - - - - - 0.941 - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
93. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.939 - - - - - 0.939 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
94. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 0.937 - - - - - 0.937 - - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
95. cops5 ENSDARG00000057624 1485 0.937 - - - - - 0.937 - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
96. znf827 ENSDARG00000076171 6304 0.937 - - - - - - 0.937 - - zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
97. macc1 ENSDARG00000040717 1669 0.935 - - - - - 0.935 - - - metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
98. slc12a9 ENSDARG00000060366 293 0.933 - - - - - 0.933 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
99. lamb4 ENSDARG00000039133 1220 0.932 - - - - - 0.932 - - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
100. st6gal2l st6gal2l 292 0.932 - - - - - 0.932 - - -

There are 882 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA