Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zc3h15

Gene Name Gene ID Reads Annotation
zc3h15 ENSDARG00000015889 3861 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]










Genes with expression patterns similar to zc3h15

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zc3h15 ENSDARG00000015889 3861 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
2. CASK CASK 1750 2.502 - 0.995 0.768 - - - 0.739 - -
3. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 2.409 0.702 0.996 0.711 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
4. agrn ENSDARG00000079388, ENSDARG00000110127 5806 2.393 - 0.968 - - - - 0.708 - 0.717 agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
5. map3k7 ENSDARG00000020469 2845 2.261 0.782 - 0.767 - - - 0.712 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
6. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.989 - 0.990 - - - - - - 0.999 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
7. sltm ENSDARG00000052728 6234 1.974 - 0.977 - - - - - - 0.997 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
8. akirin2 ENSDARG00000058729 13245 1.852 0.856 0.996 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
9. acin1b ENSDARG00000026842 3806 1.804 - - 0.805 - - - - - 0.999 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
10. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.792 - 0.991 0.801 - - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
11. ubr4 ENSDARG00000009549 5565 1.792 - 0.950 - - - - 0.842 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
12. ddx3 ddx3 4076 1.767 - 0.992 - - - 0.775 - - -
13. otub1a ENSDARG00000055536 2892 1.764 - 0.991 - - - - 0.773 - - OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
14. rbx1 ENSDARG00000038030 14611 1.761 0.799 - - - - - - - 0.962 ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
15. bag6 ENSDARG00000075892 3782 1.757 0.780 0.977 - - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
16. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.742 - 0.977 - - - - - 0.765 - ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
17. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.742 - 0.995 0.747 - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
18. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.723 0.769 0.954 - - - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
19. hccs hccs 1758 1.722 - 0.993 0.729 - - - - - -
20. FP236813.1 FP236813.1 1842 1.715 - 0.992 0.723 - - - - - -
21. C13H9orf72 C13H9orf72 2310 1.715 - - - - - - 0.716 - 0.999
22. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.711 - - - - - 0.712 - - 0.999 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
23. helz ENSDARG00000030560 3259 1.71 - 0.987 - - - - 0.723 - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
24. anapc16 ENSDARG00000013822 5857 1.709 - 0.986 - - - - 0.723 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
25. atp13a atp13a 2867 1.707 - - 0.708 - - - - - 0.999
26. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.702 0.706 0.996 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
27. CU655970.1 CU655970.1 2123 1.701 0.714 0.987 - - - - - - -
28. pura pura 1854 1.701 - - - - - - 0.703 - 0.998
29. glsb ENSDARG00000040705 1439 1.699 - 0.993 - - - - 0.706 - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
30. nop16 ENSDARG00000044402 3645 1.698 - 0.978 0.720 - - - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
31. taf9 ENSDARG00000077870 6992 1.698 - 0.948 - - - - 0.750 - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
32. rock1 ENSDARG00000058993 2603 1.696 - 0.991 - - - - 0.705 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
33. seh1l ENSDARG00000004280 2915 1.689 - - 0.895 - - - 0.794 - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
34. setb ENSDARG00000003920 21788 1.687 - - - - - - 0.724 - 0.963 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
35. snoU83B snoU83B 4666 1.681 - 0.977 - - - 0.704 - - -
36. syap1 ENSDARG00000012946 3560 1.657 - 0.952 0.705 - - - - - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
37. vps35 ENSDARG00000008224 13245 1.656 - 0.837 - - - - 0.819 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
38. gmfb ENSDARG00000028327 6522 1.649 0.764 - - - - - - - 0.885 glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
39. paip2b ENSDARG00000008706 4255 1.617 0.812 - - - - - 0.805 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
40. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.609 0.764 - - - - - 0.845 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
41. psmd12 ENSDARG00000052377 7763 1.606 0.745 - - - - - 0.861 - - proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
42. alyref ENSDARG00000077732 25934 1.601 - 0.708 - - - - - - 0.893 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
43. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.597 0.776 - - - - - 0.821 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
44. hat1 ENSDARG00000034916 5712 1.593 0.792 - - - - - 0.801 - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
45. smarcc1a ENSDARG00000017397 2957 1.58 0.746 - - - - - 0.834 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
46. supt6h ENSDARG00000006524 3221 1.576 - - 0.792 - - - 0.784 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
47. rerea ENSDARG00000077353 4162 1.571 0.798 - 0.773 - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
48. dpp3 ENSDARG00000020676 2393 1.562 - - 0.816 - - - 0.746 - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
49. srsf5a ENSDARG00000029818 15600 1.561 - - 0.842 - - - - - 0.719 serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
50. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.56 - - 0.734 - - - - - 0.826
51. zbtb22b ENSDARG00000003251 956 1.557 - - 0.752 - - - 0.805 - - zinc finger and BTB domain containing 22b [Source:ZFIN;Acc:ZDB-GENE-010110-4]
52. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.548 0.788 - - - - - 0.760 - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
53. h2afy2_1 ENSDARG00000087897 9887 1.544 0.823 - - 0.721 - - - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
54. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.541 - - 0.825 - - - 0.716 - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
55. ccne2 ENSDARG00000098529 4695 1.535 0.784 - - - - - 0.751 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
56. syncripl ENSDARG00000026723 3889 1.516 0.811 - - - - 0.705 - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
57. uqcrfs1_1 ENSDARG00000007745 2687 1.508 - - - - - 0.709 0.799 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
58. MRPL52 ENSDARG00000090568 4402 1.498 0.773 - - - - - - - 0.725 mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
59. apbb2b ENSDARG00000099995 1397 1.491 0.786 - - - - 0.705 - - - amyloid beta (A4) precursor protein-binding, family B, member 2b [Source:ZFIN;Acc:ZDB-GENE-090313-73]
60. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.482 - - 0.779 - - - 0.703 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
61. arid4a ENSDARG00000043873 4176 1.48 - - - - - 0.729 0.751 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
62. PHLPP1 ENSDARG00000078694 2466 1.477 - - - - - 0.738 0.739 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
63. ptk2.1 ptk2.1 766 1.472 - - 0.714 - - - 0.758 - -
64. psat1 ENSDARG00000016733 8084 1.469 - - 0.748 - - - 0.721 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
65. pkd2 ENSDARG00000014098 2384 1.468 - - 0.738 - - - 0.730 - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
66. ZBTB16 ZBTB16 3385 1.468 0.761 - - - - - 0.707 - -
67. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.466 - - 0.749 - - - - 0.717 - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
68. GID4 ENSDARG00000079482 1375 1.458 - - 0.738 - - - 0.720 - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
69. EIF1B ENSDARG00000029445 5034 1.449 0.703 - - - - 0.746 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
70. zgc:66475 ENSDARG00000099519 1348 1.438 0.719 - 0.719 - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
71. rgs3a ENSDARG00000099746 727 1.434 - - 0.725 - - - 0.709 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
72. vapal ENSDARG00000115862 3108 1.431 0.701 - - - - - 0.730 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
73. calm1a ENSDARG00000021811 4791 1.419 - - 0.713 - - - 0.706 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
74. KIAA0355 3250 1.403 0.703 - - - - 0.700 - - - KIAA0355 ortholog, transcript variant X1
75. dhx8 ENSDARG00000054707 2088 1 - - - - - - - - 1.000 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
76. zbtb5 1484 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 5
77. opa1_1 ENSDARG00000070801 1424 0.999 - - - - - - - - 0.999 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
78. galnt13 ENSDARG00000099227 1059 0.999 - - - - - - - - 0.999 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
79. fam135a ENSDARG00000059843 2352 0.999 - - - - - - - - 0.999 family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
80. tfec ENSDARG00000098745 1399 0.999 - - - - - - - - 0.999 transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
81. fopnl ENSDARG00000071198 1002 0.999 - - - - - - - - 0.999 fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
82. sec63 ENSDARG00000017740 3789 0.999 - - - - - - - - 0.999 SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
83. sorbs1 ENSDARG00000103435 2297 0.999 - - - - - - - - 0.999 sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
84. inpp5f ENSDARG00000061437 1228 0.999 - - - - - - - - 0.999 inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
85. stx2b ENSDARG00000068217 2567 0.999 - - - - - - - - 0.999 syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
86. BAD BAD 1322 0.999 - - - - - - - - 0.999
87. flot2b ENSDARG00000069774 2831 0.999 - - - - - - - - 0.999 flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
88. mrps33 ENSDARG00000020015 3551 0.999 - - - - - - - - 0.999 mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
89. pknox1.2 ENSDARG00000036542 1503 0.999 - - - - - - - - 0.999 pbx/knotted 1 homeobox 1.2 [Source:ZFIN;Acc:ZDB-GENE-020123-1]
90. dcaf15 ENSDARG00000077790 1039 0.999 - - - - - - - - 0.999 DDB1 and CUL4 associated factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-2374]
91. foxa2 ENSDARG00000003411 2309 0.999 - - - - - - - - 0.999 forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
92. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 0.999 - - - - - - - - 0.999 ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
93. sema3ga ENSDARG00000042545 1603 0.999 - - - - - - - - 0.999 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
94. tpd52l2a ENSDARG00000027154 4359 0.999 - - - - - - - - 0.999 tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
95. hnrnpua ENSDARG00000015206 4012 0.999 - - - - - - - - 0.999 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
96. tfam ENSDARG00000063145 4524 0.999 - - - - - - - - 0.999 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
97. ing5b ENSDARG00000068175 2502 0.998 - 0.998 - - - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
98. gng3 ENSDARG00000009553 2530 0.998 - - - - - - - - 0.998 guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
99. nnt ENSDARG00000023536 7357 0.998 - - - - - - - - 0.998 nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
100. cxcr7b cxcr7b 2482 0.998 - - - - - - - - 0.998

There are 1025 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA