Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zc3h12b

Gene Name Gene ID Reads Annotation
zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]










Genes with expression patterns similar to zc3h12b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
2. SPTBN4_1 ENSDARG00000092624 473 3.229 - - - - - 0.741 0.925 0.812 0.751 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
3. nrxn2a ENSDARG00000061454 291 2.678 - - - - - - 0.955 0.956 0.767 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
4. pou3f2a ENSDARG00000070220 817 2.583 - - - - - 0.911 0.912 - 0.760 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
5. fyna ENSDARG00000011370 1679 2.543 - - - - - 0.831 0.812 0.900 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
6. stap2a ENSDARG00000092810 591 2.535 - - - - - - 0.778 0.947 0.810 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
7. celsr1b ENSDARG00000058259 1219 2.53 - - - - - - 0.769 0.985 0.776 cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
8. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.508 - - - - - - 0.904 0.896 0.708 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
9. gdf11 ENSDARG00000044924 534 2.494 - - - - - 0.859 0.882 - 0.753 growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
10. chrna2b ENSDARG00000057025 217 2.491 0.768 - - - - 0.774 0.949 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
11. tmem35 ENSDARG00000052567 5685 2.458 - - - - - 0.820 0.827 - 0.811 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
12. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.403 - - - - - - 0.829 0.802 0.772 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
13. FGFBP3 FGFBP3 993 2.395 - - - - - 0.763 0.916 - 0.716
14. her4.3 ENSDARG00000070770 613 2.377 - 0.890 - - - 0.743 0.744 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
15. lrrtm1 ENSDARG00000052713 1041 2.372 0.770 - - - - 0.725 0.877 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
16. fzd3a ENSDARG00000021664 1958 2.356 - - 0.739 - - - 0.801 - 0.816 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
17. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.35 - - - - - - 0.804 0.825 0.721 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
18. CABZ01028287.1 CABZ01028287.1 626 2.321 - - - - - 0.820 - 0.712 0.789
19. hnrnpa3 ENSDARG00000059351 453 2.315 - 0.782 - - - 0.727 0.806 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
20. AGO1 ENSDARG00000092644 4521 2.3 - - 0.701 - - 0.728 0.871 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
21. C8H1orf106 C8H1orf106 2690 2.289 - - - - - 0.757 0.807 0.725 -
22. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.279 - - 0.727 - - 0.721 - - 0.831 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
23. fam60al 2846 2.268 - - 0.775 - - - 0.738 - 0.755 family with sequence similarity 60, member A, like
24. ntng2a ENSDARG00000077367 43 2.26 0.716 - - - - 0.757 0.787 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
25. pcdh19 ENSDARG00000034344 2378 2.258 - - - - - 0.718 0.733 - 0.807 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
26. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.251 - 0.765 - - - - 0.717 - 0.769 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
27. fmnl2b ENSDARG00000075041 1744 2.23 - - - - - 0.754 0.755 - 0.721 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
28. si:ch211-10a23.2 ENSDARG00000060656 471 2.223 - - - - - 0.705 0.715 - 0.803 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
29. pou3f3a ENSDARG00000042032 2835 2.214 - - - - - 0.750 0.756 - 0.708 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
30. nr4a2a ENSDARG00000017007 140 2.194 - - - - - 0.750 0.731 - 0.713 nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
31. tnika ENSDARG00000056218 728 2.163 - 0.700 0.754 - - - 0.709 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
32. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.896 - - - - - 0.949 0.947 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
33. zgc:110366 ENSDARG00000004167 314 1.872 - 0.904 - - - - - 0.968 - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
34. PBRM1 ENSDARG00000003877 225 1.838 - - - - - - 0.864 0.974 - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
35. ENSDARG00000089986 ENSDARG00000089986 308 1.825 - 0.840 - - - - - 0.985 -
36. zgc:112001 ENSDARG00000078034 93 1.819 - - - - - 0.842 - 0.977 - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
37. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.818 - - - - - 0.832 - 0.986 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
38. FAM171A2 FAM171A2 707 1.813 - - - - - - 0.948 0.865 -
39. si:ch73-127m5.1 ENSDARG00000060680 253 1.802 - - - - - 0.832 - 0.970 - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
40. si:ch211-247j9.1 ENSDARG00000079283 217 1.8 - - - - - 0.916 0.884 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
41. nova1 ENSDARG00000020178 4129 1.796 - - - - - - 0.921 0.875 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
42. ZNF337_7 ZNF337_7 198 1.793 - - - - - - 0.812 0.981 -
43. ZNF337_21 ZNF337_21 53 1.791 - - - - - 0.809 - 0.982 -
44. sb:cb54 sb:cb54 475 1.788 - - - - - - 0.829 0.959 -
45. C19H9orf91 C19H9orf91 249 1.774 0.806 - - - - - - 0.968 -
46. lrit2 ENSDARG00000030626 69 1.77 - - - - - - 0.787 0.983 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
47. syt9a ENSDARG00000003994 298 1.767 - - - - - - 0.802 0.965 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
48. cdh7 582 1.767 - - - - - 0.900 0.867 - - cadherin 7, type 2, transcript variant X1
49. her2 ENSDARG00000038205 3219 1.766 - - - - - 0.890 0.876 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
50. glipr1b ENSDARG00000030078 73 1.76 - - - - - - - 0.985 0.775 GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
51. cldn5a ENSDARG00000043716 3865 1.755 - - - - - - 0.813 0.942 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
52. mgrn1a ENSDARG00000100072 263 1.754 - - - - - - 0.787 0.967 - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
53. ptpreb ENSDARG00000021151 739 1.747 - - - - - 0.922 0.825 - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
54. scg2b ENSDARG00000038574 345 1.744 - - - - - - 0.808 0.936 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
55. CACFD1 ENSDARG00000090818 1298 1.743 - - - - - - 0.824 0.919 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
56. zic1 ENSDARG00000015567 2520 1.74 - - - - - - 0.821 0.919 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
57. im:7162084 im:7162084 665 1.738 - - - - - 0.826 0.912 - -
58. nbeaa ENSDARG00000070080 862 1.733 - - - - - - 0.945 - 0.788 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
59. irx2a ENSDARG00000001785 262 1.732 - - - - - - - 0.941 0.791 iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
60. il21r il21r 74 1.732 - - - - - 0.750 - 0.982 -
61. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.727 - - - - - 0.817 0.910 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
62. cabp2b ENSDARG00000052277 119 1.724 - 0.740 - - - - - 0.984 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
63. dnase2 ENSDARG00000073893 141 1.72 - 0.740 - - - - - 0.980 - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
64. ndrg4 ENSDARG00000103937 1234 1.719 - - - - - - 0.911 - 0.808 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
65. NPTXR NPTXR 241 1.715 - 0.874 - - - - 0.841 - -
66. dpysl5a ENSDARG00000011141 1827 1.712 - - - - - - 0.887 - 0.825 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
67. gtf3c3 ENSDARG00000043247 202 1.705 - 0.729 - - - - - 0.976 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
68. notch1b ENSDARG00000052094 7874 1.7 - - - - - - 0.901 0.799 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
69. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.698 - - - - - - 0.738 0.960 - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
70. SRPK2 446 1.697 - - - - - 0.819 0.878 - - SRSF protein kinase 2, transcript variant X4
71. pcp4a ENSDARG00000053130 1024 1.697 - - - - - - 0.887 0.810 - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
72. zic5 ENSDARG00000016022 1034 1.696 - - - - - - 0.765 0.931 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
73. ANKRD13D ENSDARG00000098140 88 1.694 - - - - - 0.895 0.799 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
74. foxb1a ENSDARG00000089042 101 1.689 - - - - - 0.750 0.939 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
75. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.688 - - - - - - - 0.974 0.714 BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
76. lhx1a ENSDARG00000014018 958 1.687 - - - - - - 0.900 - 0.787 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
77. C24H8orf33 C24H8orf33 406 1.687 - 0.705 - - - - - 0.982 -
78. pkib ENSDARG00000053110 527 1.685 - - - - - - 0.788 0.897 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
79. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1.682 - - - - - 0.895 0.787 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
80. si:dkey-16p19.3 si:dkey-16p19.3 119 1.682 - - - - - 0.895 0.787 - -
81. ptprna ENSDARG00000058646 1327 1.68 - - - - - - 0.798 0.882 - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
82. scn2b ENSDARG00000101713 796 1.68 - - - - - - 0.815 0.865 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
83. inaa ENSDARG00000011862 115 1.68 - - - - - - 0.701 0.979 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
84. fez1 ENSDARG00000023174 701 1.679 - - - - - - 0.898 - 0.781 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
85. LMTK3 LMTK3 222 1.679 - - - - - 0.859 0.820 - -
86. PPP1R9B PPP1R9B 855 1.678 - 0.782 - - - - - 0.896 -
87. tuba1c ENSDARG00000055216 8384 1.677 - - - - - - 0.878 - 0.799 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
88. mb21d2a mb21d2a 421 1.671 - - - - - 0.739 0.932 - -
89. bub1bb ENSDARG00000074927 1667 1.669 - - - - - - - 0.884 0.785 BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
90. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.666 - - - - - - 0.900 - 0.766 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
91. camsap1b ENSDARG00000035122 492 1.665 0.735 - - - - - - 0.930 - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
92. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.664 - - - - - 0.884 0.780 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
93. SLC35F4 ENSDARG00000103124 55 1.664 - - - - - 0.768 0.896 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
94. TMEM57 TMEM57 260 1.66 - - - - - - 0.864 - 0.796
95. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.654 - - - - - - 0.838 - 0.816 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
96. ccdc6b ENSDARG00000017595 828 1.652 - - - - - 0.738 - 0.914 - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
97. tox ENSDARG00000032317 9126 1.651 - - - - - - 0.828 - 0.823 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
98. GJD2_1 GJD2_1 3045 1.651 - - - - - 0.822 0.829 - -
99. si:dkey-92j12.6 211 1.649 - - - - - 0.707 0.942 - - si:dkey-92j12.6
100. aaas ENSDARG00000102274 1192 1.647 0.702 - - - - - - 0.945 - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]

There are 2426 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA