Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zbed4

Gene Name Gene ID Reads Annotation
zbed4 ENSDARG00000024306, ENSDARG00000110788 513 zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]










Genes with expression patterns similar to zbed4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zbed4 ENSDARG00000024306, ENSDARG00000110788 513 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]
2. C7H7orf43 C7H7orf43 381 1.591 - - - - - 0.780 - 0.811 -
3. SMIM22 ENSDARG00000105068 246 1.587 - 0.813 - - - - - 0.774 - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
4. rassf10a 417 1.518 - 0.718 - - - - - 0.800 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
5. PPP1R16B ENSDARG00000079860 390 1.511 - - - - - - 0.709 0.802 - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
6. C25H7orf60 C25H7orf60 699 1.505 - - - - - - 0.725 0.780 -
7. hunk ENSDARG00000091317 241 1.5 - - 0.721 - - - - 0.779 - hormonally up-regulated Neu-associated kinase [Source:ZFIN;Acc:ZDB-GENE-050309-240]
8. arhgef1a ENSDARG00000040380 239 1.472 - - - - - 0.724 - 0.748 - Rho guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-030722-5]
9. foxp1b ENSDARG00000014181 2594 1.47 - 0.745 - - - - 0.725 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
10. MTERF MTERF 178 0.903 - 0.903 - - - - - - -
11. traip ENSDARG00000011262 410 0.902 - - - - - - - 0.902 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
12. C9H3orf38 C9H3orf38 83 0.896 - - - - - - - 0.896 -
13. PCDH12 ENSDARG00000076594 381 0.895 - 0.895 - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
14. hdhd3 ENSDARG00000053934 190 0.891 - 0.891 - - - - - - - haloacid dehalogenase-like hydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040724-118]
15. terf1 ENSDARG00000058710 317 0.884 - - - - - - - 0.884 - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
16. ftr51 ENSDARG00000029105 103 0.883 - 0.883 - - - - - - - finTRIM family, member 51 [Source:ZFIN;Acc:ZDB-GENE-081104-54]
17. map3k19 ENSDARG00000094272 59 0.883 - 0.883 - - - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
18. OTOP1 ENSDARG00000021566 443 0.883 - 0.883 - - - - - - - otopetrin 1 [Source:HGNC Symbol;Acc:HGNC:19656]
19. C13H20orf194 C13H20orf194 580 0.883 - 0.883 - - - - - - -
20. rnf113a ENSDARG00000037930 849 0.882 - - - - - - - 0.882 - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
21. cebpz ENSDARG00000045857 270 0.881 - - - - - - - 0.881 - CCAAT enhancer binding protein zeta [Source:ZFIN;Acc:ZDB-GENE-050417-261]
22. xrn1 ENSDARG00000091652 2864 0.878 - - - - - - - 0.878 - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
23. yod1 ENSDARG00000008542 56 0.878 - 0.878 - - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
24. ZNF408 ENSDARG00000036043 232 0.878 - - - - - - - 0.878 - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
25. tpi1a ENSDARG00000025012 562 0.875 - - - - - - - 0.875 - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
26. ccdc101 ccdc101 778 0.875 - - - - - - 0.875 - -
27. prmt6 ENSDARG00000069706 484 0.873 - - - - - - - 0.873 - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
28. CU856359.2 CU856359.2 182 0.871 - - - - - - - 0.871 -
29. cers4a ENSDARG00000031387 19 0.868 - - - - - - - 0.868 - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
30. zgc:110821 ENSDARG00000077085 210 0.865 - - - - - - - 0.865 - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
31. zbtb17 ENSDARG00000074548 661 0.865 - - - - - - - 0.865 - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
32. znf574 ENSDARG00000087074 885 0.864 - 0.864 - - - - - - - zinc finger protein 574 [Source:ZFIN;Acc:ZDB-GENE-100922-259]
33. fasn ENSDARG00000087657 99 0.862 - - - - - - - 0.862 - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
34. rem2 ENSDARG00000074064, ENSDARG00000109687 219 0.862 - 0.862 - - - - - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
35. USP31 ENSDARG00000074017 628 0.861 - 0.861 - - - - - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
36. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 0.86 - - - - - - - 0.860 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
37. ARMCX3 ARMCX3 328 0.858 - - - - - - - 0.858 -
38. FGD5 FGD5 250 0.856 - 0.856 - - - - - - -
39. npm3 ENSDARG00000103594 302 0.855 - - - - - - - 0.855 - nucleophosmin/nucleoplasmin, 3 [Source:ZFIN;Acc:ZDB-GENE-050320-50]
40. si:dkey-285e18.8 si:dkey-285e18.8 170 0.855 - - - - - - - 0.855 -
41. zgc:92664 ENSDARG00000015161 1651 0.854 - - - - - 0.854 - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
42. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 0.854 - - - - - - - 0.854 - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
43. grip1 ENSDARG00000015053 1275 0.854 - - - - - - - 0.854 - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
44. ern1 ENSDARG00000013997 473 0.854 - 0.854 - - - - - - - endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]
45. tmem41aa ENSDARG00000070028 248 0.853 - - - - - 0.853 - - - transmembrane protein 41aa [Source:ZFIN;Acc:ZDB-GENE-050522-53]
46. HID1 HID1 282 0.852 - 0.852 - - - - - - -
47. pus7l_1 ENSDARG00000069780 49 0.852 - - - - - - - 0.852 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
48. si:dkey-106l3.7 ENSDARG00000093444 29 0.851 - - - - - - - 0.851 - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
49. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.85 - - - - - - - 0.850 - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
50. wtip ENSDARG00000103607 797 0.849 - - - - - - - 0.849 - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
51. CABZ01069020.1 ENSDARG00000105806 19 0.849 - - - - - - - 0.849 - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
52. si:ch211-147d7.5 ENSDARG00000095457 132 0.848 - - - - - - - 0.848 - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
53. trim35-27 ENSDARG00000035009 62 0.847 - - - - - - - 0.847 - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
54. ms4a17a.2 ENSDARG00000105674 32 0.846 - - - - - - - 0.846 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
55. nsmce1 ENSDARG00000098780 289 0.846 - - - - - - - 0.846 - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
56. klf13 ENSDARG00000061368 1151 0.846 - 0.846 - - - - - - - Kruppel-like factor 13 [Source:ZFIN;Acc:ZDB-GENE-060929-1274]
57. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.846 - - - - - - - 0.846 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
58. nbeal2 ENSDARG00000098641 1243 0.845 - 0.845 - - - - - - - neurobeachin-like 2 [Source:ZFIN;Acc:ZDB-GENE-100922-283]
59. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.845 - 0.845 - - - - - - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
60. adat2 ENSDARG00000041944 212 0.844 - - - - - - - 0.844 - adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-360]
61. polr2gl ENSDARG00000056127 1771 0.844 - 0.844 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
62. sp3b ENSDARG00000007812 2928 0.843 - - - - - 0.843 - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
63. pargl ENSDARG00000101719 155 0.843 - - - - - - - 0.843 - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
64. NMUR1 NMUR1 30 0.843 - - - - - - - 0.843 -
65. emx3 ENSDARG00000020417 85 0.843 - - - - - - - 0.843 - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
66. TTF1_2 TTF1_2 26 0.843 - - - - - - - 0.843 -
67. TRIM35_7 TRIM35_7 22 0.843 - - - - - - - 0.843 -
68. rxrba ENSDARG00000078954 85 0.842 - - - - - - - 0.842 - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
69. CABZ01087514.1 ENSDARG00000090861 245 0.842 - - - - - - - 0.842 - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
70. hacl1 ENSDARG00000020529 228 0.842 - - - - - - - 0.842 - 2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]
71. cdt1 ENSDARG00000051854 206 0.841 - - - - - - - 0.841 - chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
72. pik3cg ENSDARG00000017757 157 0.841 - - - - - - - 0.841 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
73. sult3st1 ENSDARG00000009885 218 0.841 - - - - - - - 0.841 - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
74. STRN ENSDARG00000100011 308 0.841 - - - - - - - 0.841 - striatin, calmodulin binding protein [Source:ZFIN;Acc:ZDB-GENE-070112-1172]
75. CABZ01113899.1 CABZ01113899.1 11 0.841 - - - - - - - 0.841 -
76. sik2b ENSDARG00000062315 1303 0.839 - - - - - - 0.839 - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
77. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 0.839 - - - - - - - 0.839 - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
78. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 0.839 - - - - - - - 0.839 - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
79. gpx1b ENSDARG00000006207 67 0.838 - - - - - - - 0.838 - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
80. mocs3 ENSDARG00000008239 163 0.838 - - - - - - - 0.838 - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
81. C24H18orf8 C24H18orf8 87 0.838 - - - - - - - 0.838 -
82. ar ENSDARG00000067976, ENSDARG00000114287 192 0.838 - 0.838 - - - - - - - androgen receptor [Source:ZFIN;Acc:ZDB-GENE-060131-1]
83. RNF130 ENSDARG00000089767 559 0.838 - - - - - - - 0.838 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
84. golga2 ENSDARG00000063197 30 0.838 - - - - - - - 0.838 - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
85. TNFRSF11B ENSDARG00000098377 98 0.837 - - - - - - - 0.837 - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
86. CU302436.4 CU302436.4 310 0.837 - - - - - - - 0.837 -
87. MYO9B ENSDARG00000078313 97 0.837 - - - - - - - 0.837 - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
88. ZNF337_5 ZNF337_5 48 0.835 - - - - - - - 0.835 -
89. mogat3b ENSDARG00000003635 394 0.835 - - - - - - - 0.835 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
90. stk24b ENSDARG00000023878 1054 0.835 - - - - - 0.835 - - - serine/threonine kinase 24b (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2841]
91. dlx6a ENSDARG00000042291 185 0.834 - - - - - - - 0.834 - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
92. myh7ba ENSDARG00000076075 140 0.833 - - - - - - - 0.833 - myosin, heavy chain 7B, cardiac muscle, beta a [Source:ZFIN;Acc:ZDB-GENE-100914-2]
93. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.833 - - - - - - - 0.833 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
94. trpc4apb ENSDARG00000020647 670 0.833 - - - - - - - 0.833 - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
95. mfsd10 ENSDARG00000086786 304 0.832 - - - - - - - 0.832 - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
96. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 0.832 - - - - - - - 0.832 - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
97. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 0.83 - 0.830 - - - - - - - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
98. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.83 - - - - - - - 0.830 - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
99. tmem248 ENSDARG00000018825 1560 0.829 - - - - - 0.829 - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
100. immp1l ENSDARG00000045935 175 0.829 - - - - - - - 0.829 - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]

There are 554 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA