Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for yy1a

Gene Name Gene ID Reads Annotation
yy1a ENSDARG00000042796 4982 YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]










Genes with expression patterns similar to yy1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. yy1a ENSDARG00000042796 4982 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
2. CORO1C CORO1C 5554 3.829 - - 0.947 0.917 0.975 - - - 0.990
3. plxnb1b ENSDARG00000017211 4676 2.717 - - - 0.981 0.980 - 0.756 - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
4. tmem33 ENSDARG00000041332 2883 2.673 - - 0.942 - 0.980 0.751 - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
5. ptplb ptplb 6135 2.572 - - 0.879 - - 0.705 - - 0.988
6. TNRC6A ENSDARG00000079688 14433 2.519 - - - 0.926 - 0.860 0.733 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
7. inip ENSDARG00000028523 1925 2.456 - - 0.948 - - - 0.777 0.731 - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
8. arid4a ENSDARG00000043873 4176 2.299 - - - 0.744 - 0.783 0.772 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
9. paip2b ENSDARG00000008706 4255 2.288 - 0.737 - - - 0.812 0.739 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
10. azi1_1 azi1_1 1375 1.977 - - - - 0.986 - - - 0.991
11. gli2b ENSDARG00000020884 1468 1.974 - - - 0.986 0.988 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
12. CU633999.1 ENSDARG00000098197 2880 1.971 - - - 0.983 - - - - 0.988
13. ftr82 ENSDARG00000055647 3302 1.968 - - - - 0.978 - - - 0.990 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
14. wdr82 ENSDARG00000014083 3159 1.94 - - 0.949 - - - - - 0.991 WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
15. kansl3 ENSDARG00000029556 2487 1.93 - - 0.957 - 0.973 - - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
16. rnf20 ENSDARG00000016664 3641 1.908 - - 0.925 - 0.983 - - - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
17. ctnnbip1 ENSDARG00000038954 2519 1.906 - - 0.925 - 0.981 - - - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
18. CABZ01007794.1 CABZ01007794.1 14290 1.897 - - - 0.936 - - - - 0.961
19. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.891 - - 0.907 - 0.984 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
20. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.889 - - - - 0.928 - - - 0.961 zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
21. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.88 - - - - 0.888 - - - 0.992 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
22. cbfa2t2 ENSDARG00000074337 4323 1.877 - - 0.954 - - - - 0.923 - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
23. atp6v1h ENSDARG00000006370 7028 1.869 - - 0.894 - - - - - 0.975 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
24. slc1a5 ENSDARG00000099186 7580 1.866 - - 0.881 0.985 - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
25. id2a ENSDARG00000055283 7428 1.856 - - 0.877 0.979 - - - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
26. si:dkey-11e23.5 si:dkey-11e23.5 3464 1.833 - - - - - - 0.853 - 0.980
27. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.832 - 0.847 - - 0.985 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
28. CR954963.1 ENSDARG00000097153 1135 1.829 - 0.844 - - 0.985 - - - -
29. chtopa ENSDARG00000057234 3287 1.802 - 0.819 - 0.983 - - - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
30. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.795 - - - - 0.988 0.807 - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
31. hspd1 ENSDARG00000056160 13690 1.786 - - - 0.928 - - - 0.858 - heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]
32. kctd9 kctd9 973 1.781 - - - - 0.984 - 0.797 - -
33. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.779 - - 0.876 - - - - 0.903 - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
34. aldh4a1 ENSDARG00000038207 4639 1.764 - - - 0.980 - 0.784 - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
35. cct3 ENSDARG00000016173 15869 1.763 - - - 0.912 - - - 0.851 - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
36. rab11ba ENSDARG00000041878 4651 1.761 - - - - 0.952 0.809 - - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
37. irf2bp2a ENSDARG00000004702 6719 1.758 - 0.798 - - - - - - 0.960 interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
38. snx12 ENSDARG00000019060 9563 1.752 - - - - 0.960 - - 0.792 - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
39. CABZ01044136.1 CABZ01044136.1 2596 1.749 - - - - - - 0.758 - 0.991
40. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.734 - - - - - - 0.748 - 0.986 zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
41. ankrd13c ENSDARG00000103831 3593 1.733 - - - - 0.969 0.764 - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
42. pank1b ENSDARG00000010098 3202 1.731 - - 0.939 - - - 0.792 - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
43. si:ch211-79l20.4 1305 1.726 - - - - 0.985 0.741 - - - si:ch211-79l20.4, transcript variant X3
44. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.726 - - 0.894 - - 0.832 - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
45. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 1.725 - 0.747 - - 0.978 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
46. sema3fa ENSDARG00000011163 759 1.722 - 0.782 0.940 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
47. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.722 - - - 0.988 - - 0.734 - - RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
48. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.722 - 0.765 0.957 - - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
49. prelid1a ENSDARG00000098671 4745 1.72 - - - 0.969 - 0.751 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
50. lrp1b lrp1b 3216 1.719 - - - - 0.974 0.745 - - -
51. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 1.717 - 0.731 - 0.986 - - - - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
52. FRMPD1_1 FRMPD1_1 1589 1.711 - - - 0.983 - 0.728 - - -
53. dgcr14 1608 1.709 - - - - - - - 0.719 0.990 DiGeorge syndrome critical region gene 14
54. phax ENSDARG00000044298 2302 1.704 - 0.715 - 0.989 - - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
55. sf3a1 ENSDARG00000041887 6702 1.701 - - - - 0.980 0.721 - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
56. lpp ENSDARG00000023578 3581 1.7 0.717 - - 0.983 - - - - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
57. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.698 - 0.759 0.939 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
58. ptbp1a ENSDARG00000019362 6290 1.697 - 0.809 0.888 - - - - - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
59. arid2 ENSDARG00000007413 4413 1.697 - - 0.947 - - - - - 0.750 AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
60. rac1 rac1 7341 1.696 - - - 0.973 - - 0.723 - -
61. tecrb ENSDARG00000025904 4612 1.692 - - - 0.973 - 0.719 - - - trans-2,3-enoyl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-030131-5154]
62. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.691 - - 0.940 - - 0.751 - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
63. znf609 znf609 1049 1.69 - - - - 0.983 - 0.707 - -
64. cnot3a ENSDARG00000007135 3084 1.687 - - 0.846 - - 0.841 - - - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
65. hmbsb ENSDARG00000055991 3037 1.683 - 0.716 - 0.967 - - - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
66. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 1.681 - - - - - 0.729 - - 0.952 mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
67. polb ENSDARG00000003749 2049 1.677 - - 0.954 - - - - 0.723 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
68. eif4a3 ENSDARG00000102978 16162 1.672 - - - - - 0.702 - - 0.970 eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
69. supt16h ENSDARG00000079949 4755 1.669 - 0.730 - - 0.939 - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
70. cmip ENSDARG00000062933 4521 1.664 - 0.733 0.931 - - - - - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
71. mcts1 ENSDARG00000025972 4662 1.663 - - 0.900 - - - 0.763 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
72. col16a1 ENSDARG00000009194 5600 1.657 - 0.795 0.862 - - - - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
73. serp1 ENSDARG00000099439 23682 1.655 - - - 0.916 0.739 - - - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
74. atad5a ENSDARG00000070568 1840 1.655 - - 0.951 - - 0.704 - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
75. cahz ENSDARG00000011166 5771 1.653 - 0.731 - 0.922 - - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
76. tm2d3 ENSDARG00000076618 2310 1.652 0.723 - 0.929 - - - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
77. hnrpkl ENSDARG00000007034 4660 1.649 - 0.722 0.927 - - - - - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
78. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.64 - - 0.924 - - - 0.716 - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
79. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.633 - - 0.820 - 0.813 - - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
80. kifc1 ENSDARG00000001558 6658 1.632 - - 0.899 - - - 0.733 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
81. zfhx4 ENSDARG00000075542 6927 1.629 - - - - 0.832 0.797 - - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
82. fkbp8 ENSDARG00000001734 1709 1.628 - - 0.921 - - - - 0.707 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
83. lbr ENSDARG00000014013 4835 1.621 - - 0.909 - - - - 0.712 - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
84. srsf4 ENSDARG00000105293 9657 1.618 - - 0.801 - - - - 0.817 - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
85. gapdhs ENSDARG00000039914 8760 1.615 - 0.740 - - 0.875 - - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
86. nr2f6b ENSDARG00000003165 5855 1.604 - - - - - 0.826 0.778 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
87. hbae1 14666 1.597 - 0.895 - 0.702 - - - - - hemoglobin, alpha embryonic 1
88. nop10 ENSDARG00000104227 2463 1.593 - - 0.870 - - - - 0.723 - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
89. psmb7 ENSDARG00000037962 11542 1.576 - - 0.874 - - - 0.702 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
90. gpatch2 1221 1.576 - 0.852 - - - - 0.724 - - G patch domain containing 2, transcript variant X1
91. usp9 ENSDARG00000013708 9057 1.575 - - - - - 0.811 - 0.764 - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
92. plscr3b ENSDARG00000069432 8500 1.557 - - - - 0.828 - 0.729 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
93. blzf1 ENSDARG00000011299 2568 1.55 - 0.734 - - - - 0.816 - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
94. syncrip ENSDARG00000040184 24690 1.544 - - - 0.798 0.746 - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
95. smarca5 ENSDARG00000052348 15433 1.54 - - - - 0.708 - - 0.832 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
96. arpc5a ENSDARG00000039142 5482 1.539 - 0.713 - - 0.826 - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
97. msl2b ENSDARG00000039430 1003 1.537 - - - - - 0.788 0.749 - - male-specific lethal 2 homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1621]
98. CABZ01078889.1 CABZ01078889.1 911 1.532 - 0.736 - - - 0.796 - - -
99. sgms1 ENSDARG00000029621 6376 1.524 - 0.712 0.812 - - - - - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
100. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.52 - - 0.766 - - - 0.754 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]

There are 1452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA