Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ythdf1

Gene Name Gene ID Reads Annotation
ythdf1 ENSDARG00000016447 3391 YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]










Genes with expression patterns similar to ythdf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ythdf1 ENSDARG00000016447 3391 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
2. znf598 ENSDARG00000014945 1838 2.572 - 0.770 0.946 - - - 0.856 - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
3. ube2nb ENSDARG00000045877 4583 2.54 - 0.806 0.885 - - - 0.849 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
4. dsc2l ENSDARG00000039677 2747 2.477 - 0.742 0.933 - - - 0.802 - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
5. ncoa2 ENSDARG00000017929 2520 2.465 - - 0.939 - - - 0.807 - 0.719 nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
6. elmod2 ENSDARG00000101669 3101 1.832 - - 0.935 - - - 0.897 - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
7. pcbp2 ENSDARG00000099039 4248 1.821 - 0.867 0.954 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
8. ciao1 ENSDARG00000059212 1222 1.787 0.837 - 0.950 - - - - - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
9. brd4 ENSDARG00000078904 5367 1.756 - 0.822 0.934 - - - - - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
10. hnrnpul1 ENSDARG00000040564 6550 1.742 - - 0.948 - - - 0.794 - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
11. TCAIM ENSDARG00000079881 424 1.737 - - 0.942 - - - - 0.795 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
12. vta1 ENSDARG00000013732 6072 1.733 - 0.775 0.958 - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
13. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 1.716 - 0.765 0.951 - - - - - - TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
14. tmem30ab ENSDARG00000043555 1344 1.712 - - 0.954 - - - 0.758 - - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
15. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.7 - - 0.943 - - - 0.757 - - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
16. CCDC88C ENSDARG00000053713 1026 1.699 0.752 - 0.947 - - - - - - coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
17. carm1 ENSDARG00000018698 5599 1.686 - 0.734 0.952 - - - - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
18. tmem222a ENSDARG00000069589 1766 1.686 - - 0.953 - - - 0.733 - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
19. JMJD1C_1 JMJD1C_1 3094 1.681 - - 0.935 - - - 0.746 - -
20. sptbn2 ENSDARG00000053956 8452 1.68 - 0.731 0.949 - - - - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
21. gpatch2 1221 1.679 0.727 - 0.952 - - - - - - G patch domain containing 2, transcript variant X1
22. vangl2 ENSDARG00000027397 2418 1.674 - 0.730 0.944 - - - - - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
23. tnikb ENSDARG00000009031 1836 1.673 - 0.724 0.949 - - - - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
24. zmiz1a ENSDARG00000074502 3920 1.672 - - 0.919 - - 0.753 - - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
25. zgc:198329 ENSDARG00000076981, ENSDARG00000115877 124 1.672 0.848 - - - - - 0.824 - - zgc:198329 [Source:ZFIN;Acc:ZDB-GENE-080226-6]
26. kmt2ca ENSDARG00000079312 2109 1.67 - 0.733 0.937 - - - - - - lysine (K)-specific methyltransferase 2Ca [Source:ZFIN;Acc:ZDB-GENE-080520-3]
27. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.669 - - 0.952 - - - 0.717 - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
28. sf3a3 ENSDARG00000100114 4511 1.665 - 0.743 0.922 - - - - - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
29. ube2g2 ENSDARG00000025404 1774 1.662 0.712 - 0.950 - - - - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
30. CKAP2L ENSDARG00000100573 1136 1.661 - - 0.959 - - - - 0.702 - cytoskeleton associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-6690]
31. trpc4apb ENSDARG00000020647 670 1.654 - - 0.949 0.705 - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
32. im:7136729 im:7136729 1625 1.646 - - 0.940 - - 0.706 - - -
33. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.645 - - 0.905 - - 0.740 - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
34. ubtf ENSDARG00000035066 4070 1.645 - - 0.940 - - - 0.705 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
35. mapk12b ENSDARG00000006409 2246 1.645 - - 0.914 - - - - 0.731 - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
36. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.633 - - 0.929 - - - - - 0.704 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
37. arpp19b ENSDARG00000039880 4823 1.628 - - 0.923 - - 0.705 - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
38. ap2m1a ENSDARG00000002790 9781 1.617 - 0.835 0.782 - - - - - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
39. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 1.616 0.787 - - - - - 0.829 - - zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
40. arglu1a ENSDARG00000019223 8716 1.612 - 0.830 - - - - 0.782 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
41. ldb1a ENSDARG00000010137 3035 1.608 0.834 - - - - - 0.774 - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
42. arih2 ENSDARG00000012848 7087 1.607 - - 0.849 - - - 0.758 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
43. aldh4a1 ENSDARG00000038207 4639 1.604 - - 0.884 - - - 0.720 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
44. pomp ENSDARG00000032296 4439 1.595 - - 0.858 - - 0.737 - - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
45. puf60b ENSDARG00000001241 13827 1.587 - 0.845 - - - 0.742 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
46. enc1 ENSDARG00000035398 1657 1.586 - - 0.871 - - 0.715 - - - ectodermal-neural cortex 1 [Source:ZFIN;Acc:ZDB-GENE-060531-140]
47. ppp6c ENSDARG00000002949 2948 1.583 0.804 0.779 - - - - - - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
48. gna13b ENSDARG00000037924 1963 1.574 - - - - - - 0.791 0.783 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
49. gtf2a1 ENSDARG00000011000 2026 1.574 - 0.701 0.873 - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
50. cldn5a ENSDARG00000043716 3865 1.568 - - 0.847 - - - - - 0.721 claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
51. cacybp ENSDARG00000014731 2650 1.567 - 0.744 - - - - 0.823 - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
52. itga5 ENSDARG00000006353 1876 1.563 - 0.839 - - - - 0.724 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
53. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.561 - 0.843 0.718 - - - - - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
54. ZNF70_11 ZNF70_11 1246 1.561 0.770 - - - - - - 0.791 -
55. amotl2a ENSDARG00000061923 4713 1.558 - 0.790 - - - - 0.768 - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
56. itpka ENSDARG00000042856, ENSDARG00000115453 391 1.558 - - - - - - 0.796 0.762 - inositol-trisphosphate 3-kinase A [Source:ZFIN;Acc:ZDB-GENE-030616-116]
57. ssbp3b ENSDARG00000030155 7163 1.557 - 0.705 0.852 - - - - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
58. pum1 ENSDARG00000099256 5017 1.556 - 0.785 - - - - - - 0.771 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
59. efnb2a ENSDARG00000020164 5262 1.555 - - 0.843 - - - 0.712 - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
60. reep3l reep3l 608 1.549 0.750 - - - - - - 0.799 -
61. ube2v2 ENSDARG00000028198 23341 1.545 - - 0.820 - - - 0.725 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
62. kpna3 ENSDARG00000052641 5347 1.54 - 0.830 - - - 0.710 - - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
63. ctps1a ENSDARG00000030700 3868 1.539 - 0.778 - - - - - 0.761 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
64. C22H6orf89 C22H6orf89 1076 1.537 0.773 - - - - - - 0.764 -
65. clybl ENSDARG00000029729 690 1.537 0.730 - - - - - - 0.807 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
66. ppap2c ppap2c 1361 1.521 0.725 - - - - - 0.796 - -
67. ppp6r3 ENSDARG00000013379 2912 1.514 - 0.741 - - - - 0.773 - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
68. vps41 ENSDARG00000063573 581 1.512 0.751 - - - - - - 0.761 - vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6671]
69. DYNC1I2 DYNC1I2 4131 1.511 - 0.790 - - - 0.721 - - -
70. bcas2 ENSDARG00000043631 1971 1.508 - 0.740 - - - - 0.768 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
71. CU928061.2 CU928061.2 4550 1.504 - 0.779 - - - - 0.725 - -
72. ogt.2 1166 1.503 - - - - - 0.708 - - 0.795 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
73. pi4kb ENSDARG00000040111, ENSDARG00000111175 2132 1.503 - - - - - - 0.720 0.783 - phosphatidylinositol 4-kinase, catalytic, beta [Source:ZFIN;Acc:ZDB-GENE-061013-96]
74. lims1 ENSDARG00000026985 2072 1.493 - 0.779 - - - - 0.714 - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
75. slmo2 slmo2 5559 1.486 0.704 - - - - 0.782 - - -
76. stk40 ENSDARG00000098135 2683 1.475 - - - - - - - 0.713 0.762 serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
77. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.475 - 0.731 - - - 0.744 - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
78. ilk ENSDARG00000056964 6686 1.474 - 0.753 - - - 0.721 - - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
79. CEP250 CEP250 1175 1.472 0.765 0.707 - - - - - - -
80. stk24b ENSDARG00000023878 1054 1.47 - - - - - 0.703 0.767 - - serine/threonine kinase 24b (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2841]
81. rprd2a ENSDARG00000058089 743 1.462 0.711 - - - - - - 0.751 - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
82. ppm1g ENSDARG00000075559 6516 1.462 - 0.701 0.761 - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
83. rhoaa ENSDARG00000026845 6900 1.46 0.729 - - - - - - - 0.731 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
84. ITFG3 ITFG3 1803 1.459 - 0.734 - - - - - 0.725 -
85. txlna ENSDARG00000077037 2614 1.459 0.752 - - - - 0.707 - - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
86. nktr ENSDARG00000059097 1998 1.457 - 0.753 - - - 0.704 - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
87. ogdha ENSDARG00000034270 10334 1.457 0.707 0.750 - - - - - - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
88. hgs ENSDARG00000020960 3574 1.451 - 0.706 - - - - 0.745 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
89. myef2 ENSDARG00000059398 6050 1.43 - 0.720 - - - - 0.710 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
90. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.429 - - - - - 0.725 0.704 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
91. C9H2orf47 C9H2orf47 2036 1.423 - 0.720 - - - - 0.703 - -
92. exosc1 ENSDARG00000059841 6895 1.418 - - - - - 0.711 0.707 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
93. sdc4 ENSDARG00000059906 10105 1.413 - 0.704 - - - - 0.709 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
94. prep ENSDARG00000057151 3016 0.969 - - 0.969 - - - - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
95. AL844567.1 AL844567.1 1605 0.965 - - 0.965 - - - - - -
96. myclb ENSDARG00000034956, ENSDARG00000110185 1466 0.963 - - 0.963 - - - - - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
97. zgc:66472 ENSDARG00000075916 635 0.962 - - 0.962 - - - - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
98. rab5c ENSDARG00000026712 4733 0.962 - - 0.962 - - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
99. si:dkey-19e4.5 ENSDARG00000089886 2562 0.961 - - 0.961 - - - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
100. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 0.96 - - 0.960 - - - - - - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]

There are 1393 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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