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Results for ythdc1

Gene Name Gene ID Reads Annotation
ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]










Genes with expression patterns similar to ythdc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
2. arid4a ENSDARG00000043873 4176 3.266 - - 0.942 - - 0.727 0.761 - 0.836 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
3. khsrp ENSDARG00000026489 15738 3.065 0.712 - - - - - 0.795 0.754 0.804 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
4. WDR83OS ENSDARG00000025554 7117 2.471 - 0.973 - - 0.740 - - 0.758 - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
5. MKI67 ENSDARG00000091150 11038 2.453 - - - - 0.839 - 0.719 - 0.895 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
6. txnl4a ENSDARG00000036190 2048 2.45 - - 0.881 - - - - 0.771 0.798 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
7. hgs ENSDARG00000020960 3574 2.443 - - - - 0.894 0.718 - - 0.831 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
8. eif3s10 ENSDARG00000076815 10822 2.438 - 0.861 - - - 0.760 - - 0.817 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
9. mier1a ENSDARG00000041072 1690 2.387 - - - - 0.889 - 0.737 - 0.761 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
10. stk35l ENSDARG00000057497 3582 2.334 - - - - - 0.761 0.732 0.841 - serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
11. irx5a ENSDARG00000034043 1694 2.309 - - - - - - 0.743 0.838 0.728 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
12. cd99l2 ENSDARG00000056722 5036 2.303 - - - - - - 0.706 0.818 0.779 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
13. snrpf ENSDARG00000105037 10241 2.292 - - - - 0.812 - 0.734 0.746 - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
14. hug 4100 2.267 0.707 - - - - - 0.745 - 0.815 HuG, transcript variant X2
15. oxsr1a ENSDARG00000034189 4314 2.253 - - - - - - 0.737 0.783 0.733 oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
16. eya3 ENSDARG00000036100 1965 2.245 - - - - 0.835 - 0.701 - 0.709 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
17. znf292b ENSDARG00000043973 3791 2.217 - - - - - 0.718 0.731 0.768 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
18. KDM6B KDM6B 10265 1.877 - 0.985 - - - - - - 0.892
19. mettl16 ENSDARG00000055838 818 1.854 - 0.998 - - 0.856 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
20. PRODH_1 PRODH_1 3400 1.831 - 0.998 - - 0.833 - - - -
21. brd7 ENSDARG00000008380 3654 1.828 - - 0.938 - 0.890 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
22. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 1.816 - 0.996 - - - 0.820 - - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
23. arhgap1 ENSDARG00000024324 6904 1.813 - 0.993 - - - - - 0.820 - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
24. PSIP1 PSIP1 5252 1.805 - - 0.937 - - - - - 0.868
25. lima1 lima1 4760 1.793 - 0.997 - - - - - 0.796 -
26. sarnp ENSDARG00000059357 4768 1.769 - - 0.936 - - - - - 0.833 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
27. denr ENSDARG00000037229 8370 1.769 - 0.966 0.803 - - - - - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
28. dctn3 ENSDARG00000041363 3351 1.765 - - 0.904 - - - - 0.861 - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
29. dnajb12b ENSDARG00000087473 3811 1.763 - 0.998 - - - - 0.765 - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
30. cox6c ENSDARG00000038577 16845 1.761 - 0.923 0.838 - - - - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
31. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.727 - 0.979 - - - - 0.748 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
32. sdc2 ENSDARG00000002731 6607 1.725 - 0.973 - - 0.752 - - - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
33. tbl1x ENSDARG00000060438 1386 1.717 - 0.998 - - - - 0.719 - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
34. FP016176.1 FP016176.1 7030 1.716 - - 0.925 - - - - - 0.791
35. cwc25 ENSDARG00000003382 2134 1.716 - - 0.919 - - - - - 0.797 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
36. gnao1a ENSDARG00000016676 8184 1.714 - - - - 0.877 - - - 0.837 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
37. txnrd1 11401 1.709 - 0.992 - - - - 0.717 - - thioredoxin reductase 1
38. dusp11 ENSDARG00000038156 2490 1.709 - - - - 0.874 - - 0.835 - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
39. si:dkey-19e4.5 ENSDARG00000089886 2562 1.704 - - - - 0.864 - - - 0.840 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
40. ACVR1B ACVR1B 4824 1.704 - 0.998 - - - - - 0.706 -
41. srp19 ENSDARG00000035699 2624 1.697 - - - - - - 0.861 0.836 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
42. sirt2 ENSDARG00000011488 5389 1.687 - - 0.809 - 0.878 - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
43. nova2 ENSDARG00000017673 7685 1.682 - - - - 0.867 - - - 0.815 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
44. PROSER1 ENSDARG00000086302 1935 1.681 - - - - - - - 0.864 0.817 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
45. sf3a2 ENSDARG00000021107 2929 1.68 - - 0.927 - - 0.753 - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
46. CASKIN2_1 CASKIN2_1 2299 1.678 - - - - 0.863 - - 0.815 -
47. ak2 ENSDARG00000005926 7598 1.676 - - 0.772 - 0.904 - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
48. ppp1r14c ENSDARG00000077341 1587 1.67 - - 0.893 - - - - - 0.777 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
49. mcrs1 ENSDARG00000020840 3232 1.667 - - - - 0.872 - - - 0.795 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
50. prpf40a ENSDARG00000058467 6565 1.663 - - - - 0.896 - 0.767 - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
51. lmnb2 ENSDARG00000101624 11304 1.663 - - - - 0.922 - - - 0.741 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
52. zgc:77262 ENSDARG00000044545 5563 1.657 - - - - 0.888 - - 0.769 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
53. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.656 - - - - 0.874 - - 0.782 - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
54. sumo3a ENSDARG00000028119 13447 1.654 - - - - - - 0.877 - 0.777 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
55. prpf4bb ENSDARG00000040310 2260 1.637 - - - - - - - 0.821 0.816 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
56. ints1 ENSDARG00000100419 1958 1.629 - - - - 0.859 - 0.770 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
57. tead1a ENSDARG00000028159 3574 1.629 - - 0.929 - - - 0.700 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
58. yeats4 ENSDARG00000045874 1168 1.629 - - 0.918 - - - 0.711 - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
59. shc1 ENSDARG00000075437 3278 1.628 - - 0.898 - - - - 0.730 - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
60. arf1l arf1l 9119 1.627 - 0.926 0.701 - - - - - -
61. ranbp9 ENSDARG00000061048 2687 1.626 - - - - 0.867 - 0.759 - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
62. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.623 - - 0.903 - - - 0.720 - - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
63. ACTN4_1 ACTN4_1 8550 1.619 - 0.839 - - 0.780 - - - -
64. ep300b ENSDARG00000061108 5173 1.619 - - - - 0.800 - - 0.819 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
65. uba1 ENSDARG00000037559 11579 1.618 - - 0.815 - - - 0.803 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
66. mark2a ENSDARG00000079905 1765 1.617 - - 0.894 - - 0.723 - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
67. golga7 ENSDARG00000057676 4691 1.616 - - - - 0.886 - - 0.730 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
68. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.615 - - - - 0.897 - 0.718 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
69. ube4b ENSDARG00000037017 8012 1.614 - - - - - 0.809 - - 0.805 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
70. dpysl3 ENSDARG00000002587 4381 1.614 - - - - 0.865 - - - 0.749 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
71. clstn1 ENSDARG00000031720 5286 1.612 - - - - - - - 0.833 0.779 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
72. cct8 ENSDARG00000008243 6843 1.611 - - 0.891 - - - - 0.720 - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
73. srsf6b ENSDARG00000016783 9926 1.609 - - - - - - 0.775 - 0.834 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
74. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.609 - - - - - - 0.716 - 0.893 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
75. pfn2l ENSDARG00000012682 21690 1.608 - 0.874 - - - - 0.734 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
76. tcea1 ENSDARG00000003531 2912 1.605 - - - - 0.871 - 0.734 - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
77. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.604 - - - - - - 0.766 - 0.838 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
78. sdc4 ENSDARG00000059906 10105 1.603 - - - - 0.871 - 0.732 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
79. dla ENSDARG00000010791 9281 1.601 - - - - 0.878 - - - 0.723 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
80. pcdh18a ENSDARG00000089805 1096 1.598 - - - - 0.860 - - - 0.738 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
81. arpp19b ENSDARG00000039880 4823 1.598 - - - - 0.878 - - 0.720 - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
82. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.598 - - - - - - - 0.850 0.748 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
83. pdia4 ENSDARG00000018491 1914 1.596 - - 0.885 - - 0.711 - - - protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
84. KIF1A KIF1A 1686 1.596 - - - - 0.868 - - - 0.728
85. syncripl ENSDARG00000026723 3889 1.596 - - - - - - 0.754 - 0.842 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
86. mapk6 ENSDARG00000032103 6422 1.595 - - - - 0.838 - - 0.757 - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
87. atp6v0b ENSDARG00000031681 4611 1.594 - - - - - 0.774 - 0.820 - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
88. cbx3a ENSDARG00000003860 4922 1.594 - - - - - - - 0.751 0.843 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
89. apmap ENSDARG00000017422 2692 1.593 - - - - - 0.881 - - 0.712 adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
90. cldn12 ENSDARG00000003927 2024 1.592 - - - - 0.842 - 0.750 - - claudin 12 [Source:ZFIN;Acc:ZDB-GENE-010328-14]
91. GABARAP GABARAP 8341 1.59 - - - - 0.779 - 0.811 - -
92. epc2 ENSDARG00000007485 1200 1.59 0.821 - - - - - 0.769 - - enhancer of polycomb homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-802]
93. tgif1 ENSDARG00000059337 4020 1.59 - - - - - - 0.743 0.847 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
94. cdca8 ENSDARG00000043137 7541 1.586 - - 0.845 - - 0.741 - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
95. lztfl1 ENSDARG00000105010 1697 1.583 - - - - 0.871 - 0.712 - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
96. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.58 - - - - 0.865 - - - 0.715 eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
97. JHDM1D JHDM1D 2277 1.579 - - - - - - - 0.769 0.810
98. u2af2b ENSDARG00000011740 6946 1.574 - - - - - - 0.724 - 0.850 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
99. lypla2 ENSDARG00000053656 8971 1.571 - - - - - - 0.782 - 0.789 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
100. tsc22d1 ENSDARG00000038306 2413 1.571 - - - - - 0.768 - - 0.803 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]

There are 1361 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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