Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for yod1

Gene Name Gene ID Reads Annotation
yod1 ENSDARG00000008542 56 YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]










Genes with expression patterns similar to yod1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. yod1 ENSDARG00000008542 56 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
2. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.794 0.939 - 0.855 - - - - - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
3. zgc:174623 37 1.737 0.854 - 0.883 - - - - - - zgc:174623, transcript variant X1
4. zgc:101731 ENSDARG00000040965 27 1.718 1.000 - - - - - 0.718 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
5. CLDN20 26 1.718 1.000 - - - - - 0.718 - - claudin 20, transcript variant X2
6. zdhhc12b ENSDARG00000052787 43 1.718 1.000 - - - - - 0.718 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
7. ddx31 ENSDARG00000035507 167 1.706 - - 0.907 - - - 0.799 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
8. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.677 0.972 - - - - - 0.705 - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
9. CABZ01117437.1 CABZ01117437.1 11 1.663 0.945 - - - - - 0.718 - -
10. si:dkey-78o7.3 ENSDARG00000100387 59 1.647 0.802 - 0.845 - - - - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
11. ZNF337_24 ZNF337_24 16 1.622 0.878 - - - - - - 0.744 -
12. C24H18orf8 C24H18orf8 87 1.606 - 0.757 - - - - 0.849 - -
13. ulk3 ENSDARG00000101661 69 1.52 0.802 - - - - - 0.718 - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
14. ccdc93 ENSDARG00000040678 1131 1.517 0.739 0.778 - - - - - - - coiled-coil domain containing 93 [Source:ZFIN;Acc:ZDB-GENE-060421-8315]
15. si:ch211-113a14.26_4 31 1.433 0.715 - - - - - 0.718 - - si:ch211-113a14.26
16. BX927314.1 BX927314.1 47 1.419 - - - 0.701 - - 0.718 - -
17. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
18. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
19. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
20. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
21. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
22. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
23. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
24. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
25. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
26. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
27. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
28. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
29. itga9 ENSDARG00000032435 35 1 - - - - - - 1.000 - - integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
30. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
31. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
32. eng2a eng2a 186 1 - - - - - - 1.000 - -
33. ARID5B ENSDARG00000037196 165 1 1.000 - - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
34. cog1 ENSDARG00000105131 35 1 - - - - - - 1.000 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
35. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
36. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
37. ZNF784_2 ZNF784_2 181 1 1.000 - - - - - - - -
38. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
39. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
40. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
41. BICD1 BICD1 9 1 1.000 - - - - - - - -
42. efr3ba ENSDARG00000033516 19 1 - - - - - - 1.000 - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
43. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
44. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
45. CABZ01065506.1 CABZ01065506.1 204 1 1.000 - - - - - - - -
46. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
47. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
48. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
49. PARP9 ENSDARG00000006848 34 1 - - - - - - 1.000 - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
50. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
51. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
52. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
53. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
54. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
55. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
56. kcng4 kcng4 37 1 1.000 - - - - - - - -
57. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
58. lppr4a lppr4a 141 1 1.000 - - - - - - - -
59. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
60. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
61. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
62. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
63. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
64. dnali1 ENSDARG00000069815 10 1 - - - - - - 1.000 - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
65. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
66. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
67. OXLD1 8 1 - - - - - - - 1.000 - oxidoreductase-like domain containing 1, transcript variant X1
68. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
69. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
70. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
71. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
72. nrn1b ENSDARG00000042656 44 1 - - - - - - 1.000 - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
73. zgc:171501 ENSDARG00000075375 11 1 - - - - - - 1.000 - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
74. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
75. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
76. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
77. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
78. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
79. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
80. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
81. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
82. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
83. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
84. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
85. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
86. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
87. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
88. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
89. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
90. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
91. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
92. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
93. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
94. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
95. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
96. si:dkey-274m14.3 si:dkey-274m14.3 7 1 1.000 - - - - - - - -
97. wfikkn1 ENSDARG00000101364 11 1 1.000 - - - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
98. U6_30 U6_30 1 1 1.000 - - - - - - - -
99. CSMD1 CSMD1 15 1 1.000 - - - - - - - -
100. flh flh 47 1 1.000 - - - - - - - -

There are 873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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