Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for yars

Gene Name Gene ID Reads Annotation
yars ENSDARG00000035913, ENSDARG00000113430 2043 tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]










Genes with expression patterns similar to yars

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. yars ENSDARG00000035913, ENSDARG00000113430 2043 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
2. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 2.508 0.743 - - - - 0.766 0.999 - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
3. puf60b ENSDARG00000001241 13827 1.744 - 0.749 - - - - 0.995 - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
4. ola1 ENSDARG00000044565 22424 1.726 - - - - - 0.734 0.992 - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
5. nop56 ENSDARG00000012820 15231 1.722 - 0.731 - - - - 0.991 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
6. wdr33 ENSDARG00000018272 4076 1.701 - 0.701 - - - - 1.000 - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
7. CR847973.1 ENSDARG00000115516 8754 1.593 - 0.835 - - - 0.758 - - -
8. grsf1 ENSDARG00000053021 2752 1.551 - 0.747 - - - 0.804 - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
9. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.532 - 0.824 0.708 - - - - - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
10. rrp12 ENSDARG00000022410 2236 1.509 - 0.798 0.711 - - - - - - ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]
11. gypc ENSDARG00000041546 1487 1.5 - 0.705 - - - 0.795 - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
12. pdss1 ENSDARG00000017910 1290 1.493 - 0.750 - - - 0.743 - - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
13. mrps9 ENSDARG00000061505 1636 1.488 - 0.722 - - - 0.766 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
14. ccdc43 ENSDARG00000054446 757 1.451 0.750 - - - - 0.701 - - - coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]
15. cox7c ENSDARG00000104537 12169 1.449 0.706 - - - - 0.743 - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
16. jph1a ENSDARG00000058603 2852 1.437 - 0.729 - - - 0.708 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
17. cct5 ENSDARG00000045399 11572 1.432 0.703 0.729 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
18. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1 - - - - - - 1.000 - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
19. gtf2f1 ENSDARG00000032129 3041 1 - - - - - - 1.000 - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
20. stag2a ENSDARG00000011783 1588 1 - - - - - - 1.000 - - stromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
21. st3gal3a ENSDARG00000015374 2360 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
22. zgc:65895 ENSDARG00000034086 1258 1 - - - - - - 1.000 - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
23. nf2a ENSDARG00000020204 740 1 - - - - - - 1.000 - - neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
24. nup133 ENSDARG00000010078 2373 1 - - - - - - 1.000 - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
25. samm50 ENSDARG00000045814 4511 1 - - - - - - 1.000 - - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
26. NRD1 NRD1 3486 1 - - - - - - 1.000 - -
27. TATDN3 ENSDARG00000044072 914 1 - - - - - - 1.000 - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
28. tbc1d16 ENSDARG00000036994 948 1 - - - - - - 1.000 - - TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]
29. loxl3b ENSDARG00000039563 1657 1 - - - - - - 1.000 - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
30. ctns ENSDARG00000008890 887 1 - - - - - - 1.000 - - cystinosin, lysosomal cystine transporter [Source:ZFIN;Acc:ZDB-GENE-050522-352]
31. sncb ENSDARG00000104945 8197 1 - - - - - - 1.000 - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
32. cnnm2a ENSDARG00000061195 764 1 - - - - - - 1.000 - - cyclin and CBS domain divalent metal cation transport mediator 2a [Source:ZFIN;Acc:ZDB-GENE-050208-36]
33. dnaja1l dnaja1l 1536 1 - - - - - - 1.000 - -
34. rab32a ENSDARG00000029036 2157 1 - - - - - - 1.000 - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
35. pah ENSDARG00000020143 1551 1 - - - - - - 1.000 - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
36. ccdc124 ENSDARG00000043502 2420 1 - - - - - - 1.000 - - coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
37. p4ha1b ENSDARG00000071082, ENSDARG00000112774 3198 1 - - - - - - 1.000 - - prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
38. slc25a48 ENSDARG00000021250 1057 1 - - - - - - 1.000 - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
39. gpd1a ENSDARG00000043701 1105 1 - - - - - - 1.000 - - glycerol-3-phosphate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-050417-209]
40. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 1 - - - - - - 1.000 - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
41. phf23b ENSDARG00000036305 1073 1 - - - - - - 1.000 - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
42. inab ENSDARG00000053248 3239 1 - - - - - - 1.000 - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
43. C5H8orf4 C5H8orf4 2740 0.999 - - - - - - 0.999 - -
44. ggcx ENSDARG00000067805 3812 0.999 - - - - - - 0.999 - - gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
45. mtch2 ENSDARG00000019732 3948 0.999 - - - - - - 0.999 - - mitochondrial carrier homolog 2 [Source:ZFIN;Acc:ZDB-GENE-991008-9]
46. fam32al fam32al 5716 0.999 - - - - - - 0.999 - -
47. slc13a2 ENSDARG00000053853 1164 0.999 - - - - - - 0.999 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
48. psmb6 ENSDARG00000002240 8015 0.999 - - - - - - 0.999 - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
49. akap1b ENSDARG00000006062 4214 0.999 - - - - - - 0.999 - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
50. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 0.999 - - - - - - 0.999 - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
51. NDUFB1 ENSDARG00000087456 8270 0.998 - - - - - - 0.998 - - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
52. bloc1s6 ENSDARG00000042933 2978 0.998 - - - - - - 0.998 - - biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:ZFIN;Acc:ZDB-GENE-070112-1862]
53. map2k6 ENSDARG00000099184 8741 0.998 - - - - - - 0.998 - - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
54. ndufs2 ENSDARG00000007526 6516 0.997 - - - - - - 0.997 - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
55. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 0.997 - - - - - - 0.997 - - sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
56. trappc1 ENSDARG00000039005 6990 0.997 - - - - - - 0.997 - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
57. tpm4a ENSDARG00000023963 10932 0.996 - - - - - - 0.996 - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
58. caspb ENSDARG00000052039 4329 0.996 - - - - - - 0.996 - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
59. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 0.995 - - - - - - 0.995 - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
60. ube2d1b ENSDARG00000038576 5971 0.995 - - - - - - 0.995 - - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
61. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 0.994 - - - - - - 0.994 - - prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
62. fmodb ENSDARG00000010294 1735 0.991 - - - - - - 0.991 - - fibromodulin b [Source:ZFIN;Acc:ZDB-GENE-080327-28]
63. etf1 etf1 12861 0.991 - - - - - - 0.991 - -
64. tpd52l2a ENSDARG00000027154 4359 0.991 - - - - - - 0.991 - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
65. sox9b ENSDARG00000043923 5375 0.991 - - - - - - 0.991 - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
66. asph ENSDARG00000055945 10835 0.989 - - - - - - 0.989 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
67. LGALS3 LGALS3 8665 0.987 - - - - - - 0.987 - -
68. hdac1 ENSDARG00000015427 19804 0.983 - - - - - - 0.983 - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
69. mef2ca ENSDARG00000029764 18547 0.974 - - - - - - 0.974 - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
70. zgc:153867 35088 0.969 - - - - - - 0.969 - - zgc:153867, transcript variant X2
71. pgam2 ENSDARG00000057571 23387 0.967 - - - - - - 0.967 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
72. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 0.963 - - - - - - 0.963 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
73. slc25a20 ENSDARG00000040401 9258 0.958 - - - - - - 0.958 - - solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
74. cmn ENSDARG00000055527 14039 0.951 - - - - - - 0.951 - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
75. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 0.938 - - - - - - 0.938 - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
76. ran ENSDARG00000057026 54670 0.916 - - - - - - 0.916 - - RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
77. rpl28 ENSDARG00000005791 61993 0.893 - - - - - - 0.893 - - ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
78. zgc:112425 zgc:112425 293873 0.885 - - - - - - 0.885 - -
79. psmd7 ENSDARG00000102417 4732 0.883 - 0.883 - - - - - - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
80. idh3a ENSDARG00000030278 2983 0.871 0.871 - - - - - - - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
81. hbae3 ENSDARG00000079305 100050 0.852 - - - - - - 0.852 - - hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
82. ms4a17a.14 829 0.848 - - - - - 0.848 - - - membrane-spanning 4-domains, subfamily A, member 17A.14
83. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 0.848 - 0.848 - - - - - - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
84. atf7ip ENSDARG00000069619 5495 0.846 - 0.846 - - - - - - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
85. hsd17b10 ENSDARG00000017781 1793 0.841 - - - - - 0.841 - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
86. rpf2 ENSDARG00000043960 2719 0.84 - 0.840 - - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
87. ash1l ENSDARG00000070981 2520 0.831 - 0.831 - - - - - - - ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
88. chrnd ENSDARG00000019342 2728 0.829 - 0.829 - - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
89. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 0.828 - - - - - - 0.828 - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
90. celf1 ENSDARG00000005315 5598 0.827 - 0.827 - - - - - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
91. MDC1 ENSDARG00000086764 1851 0.824 - 0.824 - - - - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
92. uri1 ENSDARG00000026664 1474 0.824 - 0.824 - - - - - - - URI1, prefoldin-like chaperone [Source:ZFIN;Acc:ZDB-GENE-050913-30]
93. tmem147 ENSDARG00000039913 3209 0.824 - - - - - 0.824 - - - transmembrane protein 147 [Source:ZFIN;Acc:ZDB-GENE-040718-187]
94. pgm1 ENSDARG00000013561 11984 0.823 - - - - - - 0.823 - - phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
95. hmga1a ENSDARG00000028335 254077 0.822 - - - - - - 0.822 - - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
96. naa25 ENSDARG00000075446 1505 0.821 - 0.821 - - - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
97. rapgef1b ENSDARG00000015971 1024 0.82 - 0.820 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1001]
98. murca murca 6614 0.82 - - - - - 0.820 - - -
99. rps4x ENSDARG00000014690 88322 0.819 - - - - - - 0.819 - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
100. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 0.816 - - - - - 0.816 - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]

There are 343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA