Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for xrra1

Gene Name Gene ID Reads Annotation
xrra1 ENSDARG00000089578 18 X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]










Genes with expression patterns similar to xrra1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrra1 ENSDARG00000089578 18 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
2. si:dkey-211g8.6 ENSDARG00000063088 19 2.821 1.000 0.937 - - - 0.884 - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
3. MAP4K2 ENSDARG00000001234 39 2.545 - 0.841 - - - 1.000 0.704 - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
4. AL954173.3 AL954173.3 1 2 - - - 1.000 - 1.000 - - -
5. C6H22orf23 C6H22orf23 15 2 1.000 - - - - - 1.000 - -
6. si:dkey-258f14.3 ENSDARG00000075974 9 2 1.000 - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
7. gpr19 ENSDARG00000102226 17 2 - - - 1.000 - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
8. CIT_1 CIT_1 6 2 1.000 - - - - - 1.000 - -
9. BX927308.3 BX927308.3 126 2 1.000 - - - - 1.000 - - -
10. ZNF512B ENSDARG00000071055 7 2 - - - - - 1.000 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
11. BX323793.1 ENSDARG00000104134 24 2 1.000 - - - - 1.000 - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
12. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1.994 - - - - 0.994 - 1.000 - -
13. LRRC41 LRRC41 11 1.958 1.000 0.958 - - - - - - -
14. PLCG2 ENSDARG00000068763 11 1.937 - 0.937 - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
15. si:ch73-299h12.9 ENSDARG00000104488 81 1.936 1.000 0.936 - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
16. adrb3b ENSDARG00000052919 16 1.93 1.000 - - - 0.930 - - - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
17. si:ch211-66k16.28 ENSDARG00000088423 80 1.916 - 0.916 - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
18. hrh3 ENSDARG00000035942 32 1.915 1.000 0.915 - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
19. si:ch211-223a21.3 ENSDARG00000104737 28 1.913 - 0.913 - - - - 1.000 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
20. ndr1 ENSDARG00000057096, ENSDARG00000116539 10 1.91 0.919 - - - 0.991 - - - - nodal-related 1 [Source:ZFIN;Acc:ZDB-GENE-990415-256]
21. btr16 ENSDARG00000028850 21 1.89 0.953 0.937 - - - - - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
22. si:dkey-254e13.6 ENSDARG00000088301 191 1.875 1.000 0.875 - - - - - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
23. lingo2 lingo2 67 1.867 - 0.935 - - - - 0.932 - -
24. CDH24_1 CDH24_1 7 1.856 - - 0.856 - - 1.000 - - -
25. tmprss4b ENSDARG00000012860 6 1.839 - 0.937 - - - 0.902 - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
26. lrrc48 lrrc48 50 1.839 - - 0.839 - - - 1.000 - -
27. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.836 - - - - - 1.000 0.836 - -
28. ccdc170 ENSDARG00000016161 18 1.828 - - 0.828 - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
29. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.821 - - - - - 0.884 0.937 - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
30. pou6f2 ENSDARG00000086362 135 1.821 - 0.937 - - - 0.884 - - - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
31. ENSDARG00000086520 ENSDARG00000086520 26 1.819 0.841 0.978 - - - - - - -
32. nkx1.2la ENSDARG00000006350 76 1.815 - - 0.815 - - - 1.000 - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
33. zeb1a ENSDARG00000016788 48 1.792 - 0.792 - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
34. grifin ENSDARG00000033382 141 1.786 0.786 - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
35. RIBC2 ENSDARG00000075177 445 1.775 - 0.887 - - - - 0.888 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
36. CABZ01021435.3 CABZ01021435.3 5 1.764 1.000 - - 0.764 - - - - -
37. stx3a ENSDARG00000001880 69 1.759 1.000 0.759 - - - - - - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
38. npas4a ENSDARG00000055752 5 1.759 - - - - - 0.759 1.000 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
39. got1l1 ENSDARG00000053644 49 1.758 0.953 0.805 - - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
40. sorcs3b ENSDARG00000077349 72 1.747 1.000 - - - - - 0.747 - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
41. CABZ01064671.1 ENSDARG00000039935 21 1.747 - - 0.747 - - - 1.000 - -
42. CU468142.1 CU468142.1 6 1.739 - - - - - - 1.000 0.739 -
43. fam184a ENSDARG00000014081 93 1.737 - 0.918 0.819 - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
44. CMA1_4 CMA1_4 23 1.737 - - 0.737 - - - 1.000 - -
45. Metazoa_SRP_9 Metazoa_SRP_9 26 1.704 - 0.937 - - 0.767 - - - -
46. arhgap19 ENSDARG00000083189 210 1.703 - 0.851 - - - - 0.852 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
47. klc4_1 ENSDARG00000086985 22 1.701 - - - - 0.979 0.722 - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
48. mettl22 ENSDARG00000077863 81 1.697 0.841 - - - - 0.856 - - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
49. her8.2 ENSDARG00000069675 315 1.691 - 0.863 - - - - 0.828 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
50. C7H19orf12_1 C7H19orf12_1 20 1.654 - - - - - 0.856 0.798 - -
51. WDR93 ENSDARG00000087191 51 1.645 - 0.839 - - - - 0.806 - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
52. HMGXB4 HMGXB4 209 1.643 - 0.937 - - - - 0.706 - -
53. SLC2A13 SLC2A13 74 1.642 - 0.919 - - - - 0.723 - -
54. C22H19orf10_1 C22H19orf10_1 30 1.636 - 0.887 0.749 - - - - - -
55. cpne2 ENSDARG00000007753 206 1.63 0.852 - - - - 0.778 - - - copine II [Source:ZFIN;Acc:ZDB-GENE-030131-7896]
56. ptchd4 ENSDARG00000008249 17 1.614 - 0.855 - - - 0.759 - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
57. WWC1 ENSDARG00000076041 26 1.601 - 0.858 - 0.743 - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
58. myo3a ENSDARG00000010186 117 1.583 - - - - 0.749 0.834 - - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
59. igsf9ba ENSDARG00000033845 158 1.57 - - - - 0.717 - 0.853 - - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
60. ccdc113 ENSDARG00000006981 67 1.563 - - 0.859 - - - - 0.704 - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
61. zgc:193811 ENSDARG00000076745 72 1.558 - - 0.836 - - - 0.722 - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
62. ccdc11 ccdc11 79 1.547 - 0.770 0.777 - - - - - -
63. ccdc147 ccdc147 39 1.52 0.758 - 0.762 - - - - - -
64. si:dkey-205h13.2 ENSDARG00000089429 71 1.516 - 0.742 0.774 - - - - - - si:dkey-205h13.2 [Source:ZFIN;Acc:ZDB-GENE-080225-18]
65. fam193b ENSDARG00000102831 442 1.516 0.702 0.814 - - - - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
66. col5a2b ENSDARG00000024847 17 1.509 - - - - - - - 0.799 0.710 collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
67. map6 map6 70 1.499 - - 0.731 - - - 0.768 - -
68. figf 48 1.49 - - 0.739 - - 0.751 - - - c-fos induced growth factor, transcript variant X2
69. rergla ENSDARG00000019396 42 1.47 - - - - - 0.737 0.733 - - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
70. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1.424 - - 0.722 - - 0.702 - - -
71. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
72. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
73. PRR12 PRR12 38 1 - - - - - - 1.000 - -
74. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
75. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
76. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - 1.000 - -
77. OCEL1 OCEL1 27 1 - - - - - 1.000 - - -
78. si:ch211-106h4.9 ENSDARG00000075706 36 1 1.000 - - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
79. si:ch211-241e1.5 ENSDARG00000008906 70 1 1.000 - - - - - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
80. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - 1.000 - - -
81. BX323819.1 BX323819.1 9 1 - - - - - 1.000 - - -
82. si:ch211-277p15.1 2 1 - - - - - - 1.000 - - si:ch211-277p15.1, transcript variant X5
83. rnasekb ENSDARG00000104458 13 1 - - - - - - 1.000 - - ribonuclease, RNase K b [Source:ZFIN;Acc:ZDB-GENE-060825-160]
84. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
85. ANGEL1 ENSDARG00000077567 38 1 - - - - - - 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
86. si:rp71-36a1.1 ENSDARG00000095295 13 1 1.000 - - - - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
87. CU459094.1 ENSDARG00000110517 17 1 - - - - - - 1.000 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
88. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
89. ETS1 ENSDARG00000024431 6 1 - - - - - 1.000 - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
90. CABZ01117474.1 CABZ01117474.1 2 1 - - - - - 1.000 - - -
91. CABZ01025394.1 CABZ01025394.1 1 1 - - - 1.000 - - - - -
92. CU928217.1 CU928217.1 12 1 1.000 - - - - - - - -
93. ms4a17a.9 ENSDARG00000094854 933 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
94. U8 U8 11 1 1.000 - - - - - - - -
95. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
96. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
97. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 - - - - - - 1.000 - -
98. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
99. si:ch211-30g3.6 si:ch211-30g3.6 1 1 - - - - - 1.000 - - -
100. U5 U5 0 1 - - - 1.000 - - - - -

There are 1558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA