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Results for xrn2

Gene Name Gene ID Reads Annotation
xrn2 ENSDARG00000101900 2875 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]










Genes with expression patterns similar to xrn2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrn2 ENSDARG00000101900 2875 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]
2. mllt10 ENSDARG00000045401 7557 2.262 0.710 - - - - 0.847 0.705 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
3. kif22 ENSDARG00000102624 3694 2.144 0.710 - - - - - 0.708 - 0.726 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
4. erlin1 ENSDARG00000021991 5664 1.643 - - - - - 0.734 0.909 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
5. MDC1 ENSDARG00000086764 1851 1.634 - 0.818 - - - 0.816 - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
6. CR387996.1 ENSDARG00000097774 3037 1.567 - - - - - 0.842 0.725 - -
7. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.56 0.807 - - - - - 0.753 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
8. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.56 - - - - - - 0.774 - 0.786 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
9. psmd7 ENSDARG00000102417 4732 1.541 - 0.815 - - - - - - 0.726 proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
10. tmem147 ENSDARG00000039913 3209 1.529 - 0.765 - - - - 0.764 - - transmembrane protein 147 [Source:ZFIN;Acc:ZDB-GENE-040718-187]
11. BACH1 BACH1 1021 1.523 - - - - - 0.781 0.742 - -
12. cblb ENSDARG00000015199, ENSDARG00000116429 1129 1.522 - - - - - 0.724 0.798 - - Cbl proto-oncogene B, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-417]
13. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.522 - 0.810 - - - - - - 0.712 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
14. tmem9b ENSDARG00000025693 2693 1.51 - - - - - 0.734 0.776 - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
15. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.505 - 0.746 - - - - - - 0.759 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
16. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.503 - - - - - 0.791 - - 0.712 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
17. ruvbl1 ENSDARG00000002591 2381 1.492 - - - - - 0.731 - 0.761 - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
18. ube2nb ENSDARG00000045877 4583 1.489 - - - - - 0.746 - - 0.743 ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
19. gse1 ENSDARG00000062020 2337 1.488 - - - - - 0.735 0.753 - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
20. smarcc1a ENSDARG00000017397 2957 1.487 - 0.717 - - - 0.770 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
21. lbr ENSDARG00000014013 4835 1.485 - 0.709 - - - - - - 0.776 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
22. atp6v1c1a ENSDARG00000023967 4611 1.484 - - - - - 0.705 0.779 - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
23. eef2a.1 ENSDARG00000042094 1781 1.481 - 0.750 - - - - 0.731 - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
24. psmc5 ENSDARG00000015315 8458 1.479 - 0.737 - - - - 0.742 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
25. bud31 ENSDARG00000017084 3892 1.479 - 0.773 - - - - - - 0.706 BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
26. kmt2ba ENSDARG00000062962 1572 1.475 - 0.768 - - - - 0.707 - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
27. ssu72 ENSDARG00000031216 2350 1.455 - 0.749 - - - - - - 0.706 SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
28. spcs3 ENSDARG00000089976 2469 1.455 - - - - - - 0.738 - 0.717 signal peptidase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2206]
29. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.452 0.719 - - - - - 0.733 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
30. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.449 - 0.745 - - - - 0.704 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
31. cpsf2 ENSDARG00000028971 841 1.447 - 0.737 - - - - - - 0.710 cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
32. rab5ab ENSDARG00000007257 1402 1.447 - 0.707 - - - - 0.740 - - RAB5A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040122-3]
33. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.441 - - - - - 0.712 - - 0.729 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
34. tmem2 2572 1.432 - - - - - 0.722 0.710 - - transmembrane protein 2, transcript variant X1
35. si:ch73-211l13.2 ENSDARG00000095974 792 1.427 - - - - - 0.716 0.711 - - si:ch73-211l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-257]
36. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.426 - - - - - - 0.718 - 0.708 protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
37. syne2b ENSDARG00000053484 9225 1.424 0.717 - - - - - 0.707 - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
38. atp11b atp11b 1375 1.416 - 0.702 - - - - 0.714 - -
39. kdm6bb ENSDARG00000056929 4807 1.411 - - - - - 0.703 - - 0.708 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
40. zswim5 ENSDARG00000055900 4243 1.409 0.702 - - - - 0.707 - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
41. srpr 5148 0.923 - - - - - 0.923 - - - signal recognition particle receptor (docking protein)
42. Sep-12 Sep-12 1828 0.922 - - - - - 0.922 - - -
43. dnajc2 ENSDARG00000070477 902 0.915 - 0.915 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
44. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 0.908 - 0.908 - - - - - - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
45. fzd2 ENSDARG00000054438 585 0.897 - 0.897 - - - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
46. syne1a ENSDARG00000009499, ENSDARG00000116204 601 0.89 - 0.890 - - - - - - - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
47. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 0.886 - 0.886 - - - - - - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
48. rapgef1b ENSDARG00000015971 1024 0.884 - 0.884 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1001]
49. WDR53 ENSDARG00000079659 485 0.879 - 0.879 - - - - - - - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
50. thbs3a ENSDARG00000077641 631 0.879 - 0.879 - - - - - - - thrombospondin 3a [Source:ZFIN;Acc:ZDB-GENE-020708-3]
51. cnot8 ENSDARG00000020043 866 0.879 - 0.879 - - - - - - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
52. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 0.877 - - - - - 0.877 - - - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
53. TNRC6C_2 TNRC6C_2 2444 0.874 - 0.874 - - - - - - -
54. rabgef1 ENSDARG00000014430 1176 0.872 - 0.872 - - - - - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
55. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 0.872 - 0.872 - - - - - - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
56. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.871 - 0.871 - - - - - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
57. UACA UACA 1218 0.87 - - - - - 0.870 - - -
58. exoc3l4 ENSDARG00000058180 923 0.866 - - - - - 0.866 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
59. rasal2 ENSDARG00000036257 3223 0.865 - 0.865 - - - - - - - RAS protein activator like 2 [Source:ZFIN;Acc:ZDB-GENE-070912-180]
60. dcaf6 ENSDARG00000078311 1118 0.863 - 0.863 - - - - - - - ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
61. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.861 - - - - - 0.861 - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
62. trim3b ENSDARG00000005397 680 0.861 - - - - - 0.861 - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
63. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.859 - - - - - - 0.859 - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
64. ccdc58 ENSDARG00000045351 972 0.859 - 0.859 - - - - - - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
65. rab23 ENSDARG00000004151 1077 0.859 - - - - - 0.859 - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
66. eif2b4 ENSDARG00000014004 2213 0.858 - 0.858 - - - - - - - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
67. fli1b ENSDARG00000040080 348 0.857 - 0.857 - - - - - - - Fli-1 proto-oncogene, ETS transcription factor b [Source:ZFIN;Acc:ZDB-GENE-031114-3]
68. SPIN4_1 SPIN4_1 2562 0.857 - 0.857 - - - - - - -
69. cmss1 ENSDARG00000004727, ENSDARG00000112579 830 0.856 - 0.856 - - - - - - - cms1 ribosomal small subunit homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041010-146]
70. bop1 ENSDARG00000063627 643 0.855 - 0.855 - - - - - - - block of proliferation 1 [Source:ZFIN;Acc:ZDB-GENE-030219-109]
71. CDPF1 ENSDARG00000095705 553 0.852 - - - - - 0.852 - - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
72. tead1a ENSDARG00000028159 3574 0.849 - - - - - - 0.849 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
73. rgs3b ENSDARG00000035132 876 0.849 - - - - - 0.849 - - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
74. APLF APLF 691 0.849 - - - - - 0.849 - - -
75. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 0.848 - 0.848 - - - - - - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
76. sp1 ENSDARG00000088347 1697 0.848 - - - - - 0.848 - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
77. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.847 - - - - - 0.847 - - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
78. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 0.847 - - - - - 0.847 - - - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
79. hiat1b ENSDARG00000043055 757 0.846 - 0.846 - - - - - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
80. exoc7 ENSDARG00000087229 987 0.844 - 0.844 - - - - - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
81. lipg ENSDARG00000031044 1516 0.844 - 0.844 - - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
82. npepps ENSDARG00000044943, ENSDARG00000110180, ENSDARG00000116096 3572 0.843 - 0.843 - - - - - - - aminopeptidase puromycin sensitive [Source:ZFIN;Acc:ZDB-GENE-060524-3]
83. rock2a ENSDARG00000017500 1277 0.843 - - - - - 0.843 - - - rho-associated, coiled-coil containing protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030115-3]
84. CAMTA2 ENSDARG00000092799 1950 0.843 - - - - - 0.843 - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
85. SERBP1 SERBP1 9276 0.842 - - - - - 0.842 - - -
86. setd8a 2549 0.842 - 0.842 - - - - - - - SET domain containing (lysine methyltransferase) 8a
87. celf1 ENSDARG00000005315 5598 0.841 - 0.841 - - - - - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
88. fgfr1op2 ENSDARG00000009657 904 0.841 - 0.841 - - - - - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
89. bdh1 ENSDARG00000059388 3390 0.84 - 0.840 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
90. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.838 - 0.838 - - - - - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
91. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 0.838 - - - - - - 0.838 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
92. SGMS1 ENSDARG00000029621 650 0.837 - - - - - 0.837 - - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
93. stx12 ENSDARG00000098813 2576 0.837 - - - - - 0.837 - - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
94. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 0.836 - 0.836 - - - - - - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
95. nap1l1 ENSDARG00000101813 819 0.836 - 0.836 - - - - - - - nucleosome assembly protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-030516-2]
96. emc6 ENSDARG00000035282 4981 0.836 - 0.836 - - - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
97. sh3pxd2b ENSDARG00000103251 1469 0.835 - - - - - 0.835 - - - SH3 and PX domains 2B [Source:ZFIN;Acc:ZDB-GENE-060810-52]
98. rngtt ENSDARG00000032261 833 0.834 - 0.834 - - - - - - - RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
99. C19H1orf109 ENSDARG00000012113 398 0.834 - 0.834 - - - - - - - c19h1orf109 homolog (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-021219-1]
100. tmed1b ENSDARG00000017255 2238 0.833 - 0.833 - - - - - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]

There are 807 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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