Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for xrcc6bp1

Gene Name Gene ID Reads Annotation
xrcc6bp1 662 XRCC6 binding protein 1










Genes with expression patterns similar to xrcc6bp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrcc6bp1 662 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 XRCC6 binding protein 1
2. gstal gstal 1865 2.547 - 0.873 - - - 0.797 - - 0.877
3. hdac10 ENSDARG00000086458 676 2.442 0.751 0.739 - - - - - - 0.952 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
4. slc6a6a ENSDARG00000012534 183 1.881 - - - - - - - 0.924 0.957 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
5. pus7 ENSDARG00000031774 195 1.868 - - - - - - - 0.924 0.944 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
6. ncoa6 ENSDARG00000071272 759 1.866 - - - - - - - 0.916 0.950 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
7. RBM12B ENSDARG00000079717 541 1.846 - - - - - - - 0.894 0.952 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
8. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.838 - 0.886 - - - - - - 0.952 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
9. si:dkey-114c15.7 237 1.833 - - - - - - - 0.885 0.948 si:dkey-114c15.7
10. TUBB8P7_2 TUBB8P7_2 565 1.818 - 0.866 - - - - - - 0.952
11. RLIM ENSDARG00000079306 514 1.8 - 0.846 - - - - - - 0.954 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
12. nadl1.2 695 1.781 - - - - - - - 0.901 0.880 neural adhesion molecule L1.2, transcript variant X1
13. ror1 ENSDARG00000015176 378 1.772 - 0.821 - - - - - - 0.951 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
14. zgc:162948 ENSDARG00000053695 301 1.77 - 0.872 - - - - - 0.898 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
15. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 1.761 - 0.871 - - - - - - 0.890 cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
16. nol8 ENSDARG00000044143 425 1.761 - 0.806 - - - - - - 0.955 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
17. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.755 - - - - - - - 0.802 0.953 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
18. ddx41 666 1.741 - 0.808 - - - - - - 0.933 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
19. ercc4 ENSDARG00000014161 2167 1.734 - 0.961 - - - - - 0.773 - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
20. bmpr1bb ENSDARG00000102742 1036 1.72 - - - - - - - 0.810 0.910 bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
21. nrp2b ENSDARG00000038446 783 1.714 - - - - - 0.783 - 0.931 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
22. melk ENSDARG00000030759 1150 1.7 - 0.814 - - - - - - 0.886 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
23. dhdds ENSDARG00000039851 1135 1.68 - 0.738 - - - - - - 0.942 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
24. nfkbiab ENSDARG00000007693 1345 1.673 - - - - - 0.794 - - 0.879 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
25. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.667 - 0.848 - - - - - - 0.819 protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
26. spryd7a ENSDARG00000052624 1059 1.659 - 0.759 - - - - - - 0.900 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
27. FRG1 ENSDARG00000056504 1196 1.651 - 0.795 - - - - - - 0.856 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
28. syne1a ENSDARG00000009499, ENSDARG00000116204 601 1.648 - 0.805 - - - - - 0.843 - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
29. cnot3b ENSDARG00000019842 838 1.646 - - - - - - - 0.734 0.912 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
30. akt2 ENSDARG00000011219 647 1.634 - 0.759 - - - - - 0.875 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
31. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.633 - - - - - - 0.718 0.915 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
32. SPIN4_1 SPIN4_1 2562 1.629 - 0.830 - - - - - - 0.799
33. pla2g7 ENSDARG00000003584 365 1.626 - 0.883 - - - 0.743 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
34. chst12a ENSDARG00000028786 598 1.625 - - - - - - 0.775 0.850 - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
35. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.611 - - - - - - - 0.707 0.904 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
36. tmem161b ENSDARG00000055989 680 1.611 - - - - - 0.710 - 0.901 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
37. ERO1LB ERO1LB 1433 1.611 - - - - - 0.726 - 0.885 -
38. pik3r3a ENSDARG00000103038 1132 1.61 - 0.875 - - - - 0.735 - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
39. 5S_rRNA_21 5S_rRNA_21 1323 1.61 - 0.813 - - - - - - 0.797
40. bre bre 1233 1.603 - 0.716 - - - - - - 0.887
41. lamtor3 ENSDARG00000057075 2282 1.599 - - - - - 0.734 - - 0.865 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
42. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.595 - - - - - - 0.703 - 0.892 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
43. sdad1 ENSDARG00000105117 2819 1.595 - - - - - 0.702 - - 0.893 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
44. calcoco1 calcoco1 1060 1.578 - - - - - 0.705 - - 0.873
45. cpsf1 ENSDARG00000034178 2036 1.577 - 0.755 - - - - - - 0.822 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
46. angptl4 ENSDARG00000035859 2701 1.573 - 0.716 - - - - - - 0.857 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
47. si:dkeyp-1h4.8 208 1.569 - 0.865 - - - - - 0.704 - si:dkeyp-1h4.8
48. mark2a ENSDARG00000079905 1765 1.565 - - - - - 0.749 0.816 - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
49. ppp1r11 ENSDARG00000036063 587 1.562 - 0.720 - - - - - 0.842 - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
50. pitpnaa ENSDARG00000039490 1096 1.558 - - - - - 0.712 - 0.846 - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
51. arid1b ENSDARG00000092503 1376 1.541 - - - - - - - 0.727 0.814 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
52. tox3 ENSDARG00000073957 3075 1.537 - 0.783 - - - - - - 0.754 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
53. otub1b ENSDARG00000011462 4329 1.513 - - - - - 0.703 - - 0.810 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
54. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.512 - - - - - - - 0.743 0.769 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
55. FP103059.1 FP103059.1 750 1.503 - - - - - - 0.769 0.734 -
56. nsun2 ENSDARG00000056665 740 0.965 - - - - - - - - 0.965 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
57. KLF8 ENSDARG00000060661 219 0.964 - - - - - - - - 0.964 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
58. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.962 - - - - - - - - 0.962 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
59. nrxn3b ENSDARG00000062693 192 0.962 - - - - - - - - 0.962 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
60. CABZ01054405.1 CABZ01054405.1 115 0.962 - - - - - - - - 0.962
61. rbm45 ENSDARG00000063731 504 0.962 - - - - - - - - 0.962 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
62. kcnq5a ENSDARG00000069954 492 0.961 - - - - - - - - 0.961 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
63. si:dkey-156k2.6 si:dkey-156k2.6 848 0.96 - - - - - - - - 0.960
64. qser1 ENSDARG00000074750 597 0.96 - - - - - - - - 0.960 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
65. CTIF ENSDARG00000090617 270 0.96 - - - - - - - - 0.960 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
66. CU861453.1 ENSDARG00000097192 271 0.96 - - - - - - - - 0.960
67. yipf2 ENSDARG00000021399 702 0.96 - - - - - - - - 0.960 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
68. trim16 ENSDARG00000010673 519 0.959 - - - - - - - - 0.959 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
69. oraov1 497 0.959 - - - - - - - - 0.959 oral cancer overexpressed 1
70. ttc21b ENSDARG00000012368 229 0.959 - - - - - - - - 0.959 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
71. zgc:173480 171 0.958 - - - - - - - - 0.958 zgc:173480
72. abcg1 ENSDARG00000063475 97 0.958 - - - - - - - - 0.958 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
73. ZNFX1 ENSDARG00000100280 118 0.958 - - - - - - - - 0.958 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
74. cenpk ENSDARG00000039616 744 0.957 - - - - - - - - 0.957 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
75. ube3d ENSDARG00000026178 244 0.957 - - - - - - - - 0.957 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
76. rnf121 ENSDARG00000060282 1809 0.957 - - - - - - - - 0.957 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
77. PRDM12 PRDM12 133 0.957 - - - - - - - - 0.957
78. gpr143 ENSDARG00000034572 559 0.957 - - - - - - - - 0.957 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
79. SNAP91 ENSDARG00000098809 556 0.957 - - - - - - - - 0.957 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
80. rab11fip3 ENSDARG00000016490 661 0.956 - - - - - - - - 0.956 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
81. nupl2 ENSDARG00000029043 105 0.956 - - - - - - - - 0.956 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
82. si:ch211-113e8.10 ENSDARG00000079631 498 0.956 - - - - - - - - 0.956 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
83. hck ENSDARG00000058647 318 0.956 - - - - - - - - 0.956 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
84. st8sia5 ENSDARG00000036584 529 0.956 - - - - - - - - 0.956 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
85. AKAP12 AKAP12 140 0.955 - - - - - - - - 0.955
86. ZNF337_4 ZNF337_4 409 0.955 - - - - - - - - 0.955
87. ltc4s ENSDARG00000062598 138 0.955 - - - - - - - - 0.955 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
88. lsm1 ENSDARG00000043177 767 0.954 - - - - - - - - 0.954 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
89. RABEPK ENSDARG00000112165 112 0.954 - - - - - - - - 0.954 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
90. smg6 ENSDARG00000100481 493 0.954 - - - - - - - - 0.954 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
91. CR376785.2 CR376785.2 175 0.954 - - - - - - - - 0.954
92. ZFAT ENSDARG00000077987 205 0.954 - - - - - - - - 0.954 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
93. rxrgb ENSDARG00000004697 332 0.954 - - - - - - - - 0.954 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
94. flrt1a 107 0.954 - - - - - - - - 0.954 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
95. si:dkey-10p5.10 ENSDARG00000099307 371 0.953 - - - - - - - - 0.953 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
96. CR678040.1 CR678040.1 117 0.953 - - - - - - - - 0.953
97. RNPEPL1 ENSDARG00000007813 557 0.953 - - - - - - - - 0.953 arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
98. ptn ENSDARG00000102340 229 0.953 - - - - - - - - 0.953 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
99. rcbtb1 ENSDARG00000036645 255 0.953 - - - - - - - - 0.953 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
100. nod2 ENSDARG00000010756 294 0.953 - - - - - - - - 0.953 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]

There are 1242 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA