Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for xrcc6

Gene Name Gene ID Reads Annotation
xrcc6 ENSDARG00000071551, ENSDARG00000111115, ENSDARG00000114945 724 X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6420]










Genes with expression patterns similar to xrcc6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrcc6 ENSDARG00000071551, ENSDARG00000111115, ENSDARG00000114945 724 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6420]
2. pgap2 ENSDARG00000044596 60 1.678 - 0.844 0.834 - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
3. C13H10orf32 C13H10orf32 465 1.675 - 0.801 0.874 - - - - - -
4. spg21 ENSDARG00000007760 409 1.588 - 0.850 - - - 0.738 - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
5. ddx39b ENSDARG00000036069 1151 1.568 - 0.707 - - - 0.861 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
6. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 1.556 - 0.836 0.720 - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
7. SZT2 252 1.554 - - 0.770 - - - 0.784 - - seizure threshold 2 homolog (mouse)
8. igfbp1b ENSDARG00000038666 163 1.52 - 0.740 - - - - 0.780 - - insulin-like growth factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081210-3]
9. pnp5a ENSDARG00000078619 1461 1.517 - - 0.774 - - - 0.743 - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
10. emilin1b ENSDARG00000026166 1530 1.517 - 0.735 - - - - 0.782 - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
11. ippk ENSDARG00000003446 51 1.502 - - 0.759 - - 0.743 - - - inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Source:ZFIN;Acc:ZDB-GENE-050327-41]
12. tnfrsf1b ENSDARG00000070165 467 1.477 - - 0.718 - - 0.759 - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
13. dis3l2 ENSDARG00000033259 1509 1.458 - - - - - 0.754 0.704 - - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
14. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.457 - - - 0.723 - - 0.734 - - TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
15. lcor ENSDARG00000100908 291 0.958 - 0.958 - - - - - - - ligand dependent nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-061201-6]
16. dlx2a ENSDARG00000079964 1253 0.953 - 0.953 - - - - - - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
17. galk2 ENSDARG00000004059 122 0.951 - 0.951 - - - - - - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
18. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.948 - 0.948 - - - - - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
19. CECR2 ENSDARG00000078310 903 0.93 - 0.930 - - - - - - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
20. ipmkb ENSDARG00000029291 625 0.928 - 0.928 - - - - - - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
21. proc proc 1038 0.924 - 0.924 - - - - - - -
22. si:ch211-232i5.3 ENSDARG00000086874 1256 0.906 - 0.906 - - - - - - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
23. ATG4D ATG4D 648 0.905 - 0.905 - - - - - - -
24. emc8 ENSDARG00000017093 1947 0.902 - 0.902 - - - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
25. hsd11b3a hsd11b3a 1388 0.901 - 0.901 - - - - - - -
26. nup43 ENSDARG00000043884 794 0.901 - 0.901 - - - - - - - nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
27. nans nans 1365 0.9 - 0.900 - - - - - - -
28. nefmb ENSDARG00000043697 2052 0.899 - 0.899 - - - - - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
29. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 0.899 - 0.899 - - - - - - - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
30. appl2 ENSDARG00000078139, ENSDARG00000100151 1043 0.898 - 0.898 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 [Source:ZFIN;Acc:ZDB-GENE-081016-2]
31. tead3a ENSDARG00000074321 2240 0.895 - 0.895 - - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
32. klf2b ENSDARG00000040432 1730 0.893 - 0.893 - - - - - - - Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
33. pold3 ENSDARG00000076169 694 0.892 - - - - - 0.892 - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
34. sptssa ENSDARG00000071203 2306 0.892 - 0.892 - - - - - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
35. ormdl1 ENSDARG00000014333 1589 0.892 - 0.892 - - - - - - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
36. pon3 pon3 1146 0.891 - 0.891 - - - - - - -
37. ncaph2 ENSDARG00000033757 1042 0.889 - 0.889 - - - - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
38. c8a ENSDARG00000039516 495 0.886 - 0.886 - - - - - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
39. USP2_1 USP2_1 544 0.885 - 0.885 - - - - - - -
40. mst1 ENSDARG00000103308 581 0.882 - 0.882 - - - - - - - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
41. bcar3 ENSDARG00000016981 714 0.879 - - - - - 0.879 - - - BCAR3, NSP family adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080513-4]
42. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 0.879 - - - - - 0.879 - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
43. ccnd2a ENSDARG00000051748 2506 0.876 - 0.876 - - - - - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
44. zswim5 ENSDARG00000055900 4243 0.872 - 0.872 - - - - - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
45. si:dkeyp-109b10.3 si:dkeyp-109b10.3 299 0.871 - 0.871 - - - - - - -
46. ptbp2a ENSDARG00000101947 1921 0.869 - 0.869 - - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
47. C6H17orf67 C6H17orf67 687 0.869 - 0.869 - - - - - - -
48. BX548021.2_1 BX548021.2_1 164 0.867 - - 0.867 - - - - - -
49. rhbg ENSDARG00000009018 1131 0.865 - 0.865 - - - - - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
50. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 0.865 - - 0.865 - - - - - - SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
51. si:dkeyp-72e1.7 ENSDARG00000104457 169 0.863 - 0.863 - - - - - - - si:dkeyp-72e1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-229]
52. ckap5 ENSDARG00000102674 5068 0.861 - 0.861 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
53. si:ch73-103b9.2 ENSDARG00000092489 89 0.861 - - - - - 0.861 - - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
54. wu:fj08f03 wu:fj08f03 1337 0.861 - - 0.861 - - - - - -
55. U1_50 U1_50 62 0.86 - - 0.860 - - - - - -
56. CABZ01027547.1 CABZ01027547.1 128 0.86 - - 0.860 - - - - - -
57. hmgcrb ENSDARG00000105206 2080 0.86 - 0.860 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
58. asic1b ENSDARG00000101866 61 0.858 - - 0.858 - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
59. thbs2b ENSDARG00000073810 870 0.858 - - 0.858 - - - - - - thrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]
60. KCNJ6 ENSDARG00000058985 71 0.858 - - - - - 0.858 - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
61. s1pr5a ENSDARG00000040526 923 0.857 - 0.857 - - - - - - - sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
62. CLEC4A CLEC4A 1016 0.856 - 0.856 - - - - - - -
63. CU459152.1 CU459152.1 407 0.856 - - 0.856 - - - - - -
64. THEG ENSDARG00000078644 121 0.856 - - 0.856 - - - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
65. ZNF518B 475 0.855 - - 0.855 - - - - - - zinc finger protein 518B
66. nudt5 ENSDARG00000078073 779 0.854 - 0.854 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
67. TRAK1 212 0.853 - - - - - 0.853 - - - trafficking protein, kinesin binding 1, transcript variant X6
68. myhz1.2 ENSDARG00000067995 29117 0.853 - 0.853 - - - - - - - myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
69. mon1a ENSDARG00000078585 554 0.853 - - - - - 0.853 - - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
70. tbl1xr1b ENSDARG00000008966 2203 0.852 - 0.852 - - - - - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
71. mical3b ENSDARG00000094732 179 0.852 - - - - - 0.852 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-050211-1]
72. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.851 - 0.851 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
73. chico ENSDARG00000019588 77 0.851 - - 0.851 - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
74. lsr ENSDARG00000099291 881 0.85 - 0.850 - - - - - - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
75. ZNF337_20 ZNF337_20 65 0.85 - - 0.850 - - - - - -
76. usp45 ENSDARG00000075013 227 0.849 - 0.849 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
77. TEAD1 TEAD1 43 0.849 - 0.849 - - - - - - -
78. zgc:110353 ENSDARG00000039443 80 0.849 - - 0.849 - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
79. cd74a ENSDARG00000009087 20 0.848 - 0.848 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
80. foxn4 ENSDARG00000010591 2332 0.848 - 0.848 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
81. CT573322.1 CT573322.1 38 0.848 - 0.848 - - - - - - -
82. zgc:109744 ENSDARG00000070800 262 0.848 - 0.848 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
83. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.848 - - - - - 0.848 - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
84. cdc42ep2 ENSDARG00000053959 32 0.848 - - 0.848 - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
85. si:ch1073-155h21.1 ENSDARG00000007582 137 0.848 - 0.848 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
86. CABZ01114089.1 CABZ01114089.1 127 0.847 - 0.847 - - - - - - -
87. plce1 ENSDARG00000087921 44 0.847 - 0.847 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
88. CDH24 CDH24 325 0.846 - - 0.846 - - - - - -
89. sigirr ENSDARG00000062204 52 0.846 - - 0.846 - - - - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
90. CR847925.1 CR847925.1 835 0.846 - 0.846 - - - - - - -
91. ATP5J 343 0.846 - 0.846 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
92. smdt1 smdt1 99 0.846 - 0.846 - - - - - - -
93. fam57ba ENSDARG00000026875 504 0.846 - 0.846 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
94. si:ch211-263m18.4 ENSDARG00000093353 27 0.846 - - 0.846 - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
95. TTBK2_1 TTBK2_1 649 0.846 - - - - - 0.846 - - -
96. ppapdc2 ppapdc2 67 0.845 - 0.845 - - - - - - -
97. U3_5 U3_5 67 0.845 - 0.845 - - - - - - -
98. si:dkey-228i19.34 si:dkey-228i19.34 43 0.845 - 0.845 - - - - - - -
99. plxnb3 ENSDARG00000032990 98 0.845 - - 0.845 - - - - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
100. kcnk13a ENSDARG00000008212 136 0.845 - 0.845 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]

There are 934 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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