Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for xrcc5_1

Gene Name Gene ID Reads Annotation
xrcc5_1 ENSDARG00000099298 1533 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]










Genes with expression patterns similar to xrcc5_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrcc5_1 ENSDARG00000099298 1533 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
2. nrg1 ENSDARG00000104314 1081 2.571 - 0.772 0.971 - - - - - 0.828 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
3. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.447 - 0.900 - - - - 0.710 0.837 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
4. atf7ip ENSDARG00000069619 5495 2.441 - - - - - 0.779 0.834 0.828 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
5. C5H9orf78 C5H9orf78 1550 2.425 - 0.701 - - - - - 0.858 0.866
6. LGR4 ENSDARG00000060542 1222 2.418 - 0.858 - - - - 0.747 0.813 - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
7. nop16 ENSDARG00000044402 3645 2.348 - - - - - - 0.800 0.754 0.794 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
8. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 2.312 - - - - - - 0.729 0.736 0.847 mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
9. gas2l3 ENSDARG00000045880 614 2.29 - - - - - - 0.703 0.749 0.838 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
10. sart3 ENSDARG00000008032 2594 2.263 - - - - - - 0.783 0.752 0.728 squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
11. tfap4 ENSDARG00000103923 2203 2.257 - 0.715 - - - 0.736 - - 0.806 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
12. mettl3 ENSDARG00000012827 728 1.833 - 0.859 0.974 - - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
13. slain2 ENSDARG00000032114 798 1.829 - - 0.964 - - - - 0.865 - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
14. selt1b 1396 1.823 - - 0.969 - - - - - 0.854 selenoprotein T, 1b
15. qki2 ENSDARG00000010018 2230 1.823 - - 0.974 - - - - 0.849 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
16. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.822 - - - - - - - 0.889 0.933 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
17. pkib ENSDARG00000053110 527 1.815 - - 0.971 - - - - 0.844 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
18. vhl ENSDARG00000070617 663 1.815 - 0.922 - - - - - 0.893 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
19. hmgcrb ENSDARG00000105206 2080 1.797 - - 0.965 - - - - 0.832 - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
20. kif3b ENSDARG00000101120 1158 1.796 - 0.889 - - - - - - 0.907 kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
21. znf410 ENSDARG00000008218 1807 1.786 - - 0.977 - - - - 0.809 - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
22. C25H12orf4 C25H12orf4 317 1.785 - 0.935 - - - - - - 0.850
23. slc25a39 ENSDARG00000007449 630 1.78 - - - - - - - 0.905 0.875 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
24. CT573103.1 ENSDARG00000097550 950 1.774 - 0.803 0.971 - - - - - -
25. ZNF618 ENSDARG00000071469 2347 1.769 - - 0.974 - - - - - 0.795 zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
26. rnf20 ENSDARG00000016664 3641 1.768 - - 0.960 - - - - - 0.808 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
27. sec22c ENSDARG00000063387 203 1.755 - 0.855 - - - - - 0.900 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
28. kctd6a ENSDARG00000043095 480 1.754 - 0.862 - - - - - 0.892 - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
29. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.749 - - - - - - 0.827 0.922 - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
30. uso1 ENSDARG00000019581 479 1.742 - 0.848 - - - - - 0.894 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
31. appbp2 ENSDARG00000007566 1961 1.737 - - 0.958 - - 0.779 - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
32. smg5 ENSDARG00000041481 1286 1.734 - - 0.981 - - - 0.753 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
33. ppp6r3 ENSDARG00000013379 2912 1.728 - - 0.968 - - - 0.760 - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
34. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.726 - - - - - - - 0.854 0.872 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
35. pelo ENSDARG00000055477 1927 1.725 - - - - - - - 0.871 0.854 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
36. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.724 - - - - - - - 0.865 0.859 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
37. gstm gstm 4064 1.722 - - 0.880 - - - - 0.842 -
38. wu:fb17g07 wu:fb17g07 10567 1.719 - - 0.948 - - - 0.771 - -
39. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.715 - - - - - - 0.844 0.871 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
40. GUSB ENSDARG00000063126 2712 1.715 - - 0.955 - - - - - 0.760 glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
41. tjp1a ENSDARG00000077506 2658 1.71 - - 0.969 - - - - - 0.741 tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
42. pnn ENSDARG00000015851 1269 1.709 - - 0.973 - - 0.736 - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
43. pcsk5b ENSDARG00000060518 883 1.707 - 0.796 - - - - - 0.911 - proprotein convertase subtilisin/kexin type 5b [Source:ZFIN;Acc:ZDB-GENE-070822-7]
44. ranbp9 ENSDARG00000061048 2687 1.704 - - 0.968 - - - 0.736 - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
45. lipt1 ENSDARG00000025233 385 1.702 - - 0.971 - - 0.731 - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
46. fkbp8 ENSDARG00000001734 1709 1.702 - - 0.960 - - 0.742 - - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
47. sufu ENSDARG00000056801 1543 1.698 - - - - - - 0.815 0.883 - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
48. plekha3 ENSDARG00000056601 213 1.696 - 0.926 - - - - 0.770 - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
49. CORO1C CORO1C 5554 1.692 0.755 - 0.937 - - - - - -
50. dyrk1ab ENSDARG00000023814 1769 1.692 - - 0.974 - - - 0.718 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
51. sntb1 ENSDARG00000041729 163 1.69 - - - - - 0.793 - 0.897 - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
52. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.689 - - - - - - - 0.844 0.845 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
53. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.689 - - 0.953 - - - - - 0.736
54. rpf2 ENSDARG00000043960 2719 1.686 - - 0.955 - - - 0.731 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
55. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.679 - - 0.968 - - - 0.711 - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
56. nudt15 ENSDARG00000113961 381 1.677 - 0.836 - - - - - - 0.841 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
57. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.673 - 0.761 - - - - - 0.912 - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
58. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.672 - 0.907 - - - - - 0.765 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
59. cbfb ENSDARG00000040917 1422 1.672 - 0.798 - - - - - 0.874 - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
60. faf2 ENSDARG00000052374 1351 1.671 - 0.789 - - - - - - 0.882 Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
61. rnf2 ENSDARG00000010381 3427 1.667 - - 0.964 - - - 0.703 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
62. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.66 - 0.837 - - - - - - 0.823 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
63. ccdc3 ccdc3 559 1.659 - - - - - - - 0.861 0.798
64. sprb ENSDARG00000058553 1694 1.657 - - 0.954 - - - - 0.703 - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
65. lrrc40 ENSDARG00000017708 1156 1.655 - - - - - - 0.784 0.871 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
66. crebbpa ENSDARG00000104609 1739 1.655 - - 0.907 - - - - - 0.748 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
67. ddx27 ENSDARG00000091831 1471 1.655 - - - - - - - 0.814 0.841 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
68. sod1 ENSDARG00000043848 1514 1.653 - 0.879 - - - 0.774 - - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
69. smarcd2 ENSDARG00000088877 416 1.653 - 0.824 - - - - - - 0.829 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
70. otx1b 96 1.652 - - - - 0.751 - - 0.901 - orthodenticle homeobox 1b
71. MYO1D ENSDARG00000036863 768 1.65 - 0.766 - - - - - 0.884 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
72. pabpn1 ENSDARG00000045373 4876 1.648 - - 0.899 - - - 0.749 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
73. pole ENSDARG00000058533, ENSDARG00000115430 381 1.645 - 0.813 - - - - - 0.832 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
74. pigh ENSDARG00000038348 405 1.633 - 0.872 - - - - - 0.761 - phosphatidylinositol glycan anchor biosynthesis, class H [Source:ZFIN;Acc:ZDB-GENE-040718-303]
75. cry1b cry1b 152 1.629 - 0.905 - - - - 0.724 - -
76. homer3 homer3 1974 1.627 - - - - - - 0.739 0.888 -
77. hat1 ENSDARG00000034916 5712 1.625 - 0.762 - - - - - - 0.863 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
78. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.625 - 0.743 - - - - - 0.882 - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
79. vrk3 ENSDARG00000036056 424 1.625 - 0.884 - - - - 0.741 - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
80. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.623 - - - - - 0.803 - 0.820 - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
81. ATP13A3 ENSDARG00000076622 1000 1.62 - 0.793 - - - - - 0.827 - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
82. sh3glb2a ENSDARG00000008983 452 1.619 - 0.784 - - - - - 0.835 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
83. MIER3 MIER3 114 1.618 - - - - - - 0.788 - 0.830
84. plcg1 ENSDARG00000038442 5324 1.615 - - - - - - 0.751 0.864 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
85. mark2a ENSDARG00000079905 1765 1.614 - 0.845 - - - - - 0.769 - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
86. med20 ENSDARG00000046006 614 1.613 0.780 - - - - 0.833 - - - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
87. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.611 - - 0.830 - - - - - 0.781 clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
88. FBXL3 FBXL3 1769 1.611 - 0.908 - - - - 0.703 - -
89. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.606 - - - - - 0.760 - 0.846 - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
90. nudc ENSDARG00000104837 1798 1.606 - - - - - - 0.740 0.866 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
91. trps1 ENSDARG00000104082 918 1.605 - - - - - - 0.703 0.902 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
92. snapin ENSDARG00000062382 1531 1.603 - 0.772 - - - - 0.831 - - SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
93. kat6a ENSDARG00000018907 250 1.603 - 0.897 - - - 0.706 - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
94. per1b ENSDARG00000012499 320 1.603 - - - - - 0.772 - - 0.831 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
95. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.598 - - - - - - 0.773 0.825 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
96. CACFD1 ENSDARG00000090818 1298 1.596 - 0.719 - - - - - 0.877 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
97. man1b1 man1b1 3294 1.596 - - - - - 0.851 - - 0.745
98. CABZ01008011.1 CABZ01008011.1 761 1.593 - 0.720 - - - - - - 0.873
99. RBM7 ENSDARG00000020841 1203 1.593 - 0.802 - - - - 0.791 - - RNA binding motif protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6724]
100. rab1ba ENSDARG00000058044 5080 1.592 - - 0.885 - - - - - 0.707 zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]

There are 2243 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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