Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for xrcc5

Gene Name Gene ID Reads Annotation
xrcc5 ENSDARG00000099298 835 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]










Genes with expression patterns similar to xrcc5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrcc5 ENSDARG00000099298 835 7 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
2. HIST1H4J_2 HIST1H4J_2 12 1.688 - - 0.893 0.795 - - - - -
3. SLC41A2 SLC41A2 202 1.681 - 0.842 - - - - 0.839 - -
4. slc51a ENSDARG00000045306 33 1.648 - - 0.916 - - - 0.732 - - solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
5. strada ENSDARG00000037929 1614 1.636 - 0.747 - - - - 0.889 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
6. cdx1a ENSDARG00000114554 28 1.585 - 0.767 - 0.818 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
7. wu:fc32g12 wu:fc32g12 198 1.574 - 0.839 - - - - 0.735 - -
8. xrcc5_1 ENSDARG00000099298 1533 1.562 - 0.810 - - - - 0.752 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
9. LGR4 ENSDARG00000060542 1222 1.552 - 0.749 - - - - 0.803 - - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
10. srfbp1 ENSDARG00000075323 2262 1.55 - 0.793 - - - - 0.757 - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
11. aebp1 ENSDARG00000091726 906 1.54 - 0.784 - - - - 0.756 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
12. ing2 ENSDARG00000104907 1336 1.537 - - - - - - 0.765 0.772 - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
13. rfc4 ENSDARG00000042458 2 1.535 - - - 0.818 - - 0.717 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
14. si:ch211-81g2.1 si:ch211-81g2.1 5 1.535 - - - 0.818 - - 0.717 - -
15. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.535 - - - 0.818 - - 0.717 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
16. pole ENSDARG00000058533, ENSDARG00000115430 381 1.531 - 0.774 - - - - 0.757 - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
17. ccl25b ENSDARG00000070873 454 1.52 - 0.792 - - - - 0.728 - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
18. PRC1 PRC1 583 1.52 - - - - - 0.744 0.776 - -
19. haus7 ENSDARG00000037432, ENSDARG00000112118 820 1.498 - 0.726 - - - 0.772 - - - HAUS augmin-like complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-050506-15]
20. tctex1d2 ENSDARG00000054255 320 1.494 - 0.779 - - - 0.715 - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
21. cry1b cry1b 152 1.485 - 0.771 - - - - 0.714 - -
22. bmp7a ENSDARG00000018260 92 1.483 - 0.712 - - - - 0.771 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
23. vrk3 ENSDARG00000036056 424 1.478 - 0.717 - - - - 0.761 - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
24. prdx4 ENSDARG00000069013 1150 1.465 - 0.730 - - - - 0.735 - - peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
25. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 1.461 - - - 0.744 - - 0.717 - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
26. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 1.449 - 0.725 - - - - 0.724 - - zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
27. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.437 - 0.701 - - - - 0.736 - - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
28. mir199-2 mir199-2 38 1.428 - - - 0.724 - - 0.704 - -
29. dgcr14 1608 1.423 - 0.715 - - - - 0.708 - - DiGeorge syndrome critical region gene 14
30. cep44 ENSDARG00000053106 683 1.414 - - - - - - 0.707 0.707 - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
31. spata2l ENSDARG00000068814 152 1.409 - - 0.708 - - - 0.701 - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
32. PRKCA_1 ENSDARG00000099841 12 0.98 - - - 0.980 - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
33. tmem8c 10 0.943 - - 0.943 - - - - - - transmembrane protein 8C, transcript variant X1
34. MYL2 MYL2 7 0.943 - - 0.943 - - - - - -
35. si:ch73-54n14.2 ENSDARG00000091900 2 0.943 - - 0.943 - - - - - - si:ch73-54n14.2 [Source:ZFIN;Acc:ZDB-GENE-090313-164]
36. FP016235.1 ENSDARG00000097673 2 0.943 - - 0.943 - - - - - -
37. KLHDC3 ENSDARG00000102772 14 0.943 - - 0.943 - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
38. SNORD35_2 SNORD35_2 5 0.943 - - 0.943 - - - - - -
39. CT583679.1 CT583679.1 11 0.943 - - 0.943 - - - - - -
40. si:dkey-152b24.7 ENSDARG00000099715 26 0.943 - - 0.943 - - - - - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
41. nhej1 ENSDARG00000058893 172 0.938 - 0.938 - - - - - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
42. si:dkey-47k16.1 si:dkey-47k16.1 5 0.936 - - 0.936 - - - - - -
43. ctsl.1 ENSDARG00000003902 25 0.934 - - 0.934 - - - - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
44. FP325123.1_1 ENSDARG00000105359 38 0.934 - - 0.934 - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
45. NUP160 ENSDARG00000027140 6 0.929 - - 0.929 - - - - - - nucleoporin 160 [Source:ZFIN;Acc:ZDB-GENE-040426-1603]
46. si:dkey-241f21.7 si:dkey-241f21.7 3 0.927 - - - 0.927 - - - - -
47. U8 U8 11 0.927 - - 0.927 - - - - - -
48. myo15aa ENSDARG00000075292 29 0.92 - - 0.920 - - - - - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
49. si:ch73-299h12.8 ENSDARG00000103237 54 0.919 - - 0.919 - - - - - - si:ch73-299h12.8 [Source:ZFIN;Acc:ZDB-GENE-081031-66]
50. BX248410.3 ENSDARG00000114678 5 0.918 - - 0.918 - - - - - -
51. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 0.916 - 0.916 - - - - - - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
52. si:dkey-30f3.2 ENSDARG00000098087 6 0.915 - - 0.915 - - - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
53. zgc:194007 ENSDARG00000091860 4 0.913 - - 0.913 - - - - - - zgc:194007 [Source:ZFIN;Acc:ZDB-GENE-081022-49]
54. BX664721.1 ENSDARG00000051804 21 0.907 - - 0.907 - - - - - -
55. foxd3 ENSDARG00000021032 11 0.901 - - 0.901 - - - - - - forkhead box D3 [Source:ZFIN;Acc:ZDB-GENE-980526-143]
56. nudt17 ENSDARG00000008014 479 0.9 - 0.900 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
57. C1H7orf55 C1H7orf55 2552 0.896 - - - - - - 0.896 - -
58. hoga1 ENSDARG00000018944 800 0.895 - 0.895 - - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
59. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 0.894 - - 0.894 - - - - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
60. zbtb43 ENSDARG00000045983 343 0.886 - 0.886 - - - - - - - zinc finger and BTB domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-060526-378]
61. timmdc1 ENSDARG00000053466 2179 0.883 - 0.883 - - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
62. qkib ENSDARG00000002026 15 0.883 - - - 0.883 - - - - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
63. ITPR1 ITPR1 161 0.881 - 0.881 - - - - - - -
64. HYAL1 ENSDARG00000059916 134 0.88 - 0.880 - - - - - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
65. mapk6 ENSDARG00000032103 6422 0.879 - 0.879 - - - - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
66. si:dkey-61l1.4 ENSDARG00000092567 1012 0.878 - 0.878 - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
67. tlcd1 ENSDARG00000002391 90 0.876 - - 0.876 - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
68. nr4a3 ENSDARG00000055854 113 0.875 - 0.875 - - - - - - - nuclear receptor subfamily 4, group A, member 3 [Source:ZFIN;Acc:ZDB-GENE-070824-4]
69. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.872 - 0.872 - - - - - - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
70. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 0.872 - 0.872 - - - - - - - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
71. sh3glb2a ENSDARG00000008983 452 0.869 - 0.869 - - - - - - - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
72. FBXL3 FBXL3 1769 0.868 - - - - - - 0.868 - -
73. NSUN6 ENSDARG00000103478 29 0.868 - - 0.868 - - - - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
74. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 0.863 - - - 0.863 - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
75. tmem141 ENSDARG00000101963 513 0.862 - 0.862 - - - - - - - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
76. cby1 ENSDARG00000077409, ENSDARG00000113018 772 0.861 - - - - - - - 0.861 - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
77. CR925758.1 CR925758.1 83 0.86 - 0.860 - - - - - - -
78. pth1rb ENSDARG00000018418 193 0.859 - - - - - 0.859 - - - parathyroid hormone 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-991123-12]
79. dnmt1 ENSDARG00000030756 2741 0.858 - - - - - 0.858 - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
80. TRIM14_7 TRIM14_7 381 0.855 - 0.855 - - - - - - -
81. BX530409.1 BX530409.1 65 0.855 - - - 0.855 - - - - -
82. cops4 ENSDARG00000043732 1508 0.853 - 0.853 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
83. FAM210A FAM210A 437 0.853 - 0.853 - - - - - - -
84. tm4sf4 ENSDARG00000040747 65 0.849 - 0.849 - - - - - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
85. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.848 - 0.848 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
86. CT030204.3 CT030204.3 486 0.848 - 0.848 - - - - - - -
87. cdc45 ENSDARG00000043720 353 0.848 - 0.848 - - - - - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
88. gig2o ENSDARG00000086903 30 0.846 - - 0.846 - - - - - - grass carp reovirus (GCRV)-induced gene 2o [Source:ZFIN;Acc:ZDB-GENE-130517-8]
89. CABZ01071909.1_1 ENSDARG00000117524 86 0.846 - 0.846 - - - - - - -
90. rnpc3 ENSDARG00000011247 778 0.846 - 0.846 - - - - - - - RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
91. polr1c ENSDARG00000039400 606 0.844 - 0.844 - - - - - - - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
92. nupl1 nupl1 1100 0.844 - 0.844 - - - - - - -
93. trappc6b ENSDARG00000016463 1343 0.843 - 0.843 - - - - - - - trafficking protein particle complex 6b [Source:ZFIN;Acc:ZDB-GENE-041010-122]
94. luc7l ENSDARG00000055903 3357 0.843 - 0.843 - - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
95. TRMT10A ENSDARG00000036678 621 0.842 - 0.842 - - - - - - - tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
96. setd8a 2549 0.842 - - - - - - 0.842 - - SET domain containing (lysine methyltransferase) 8a
97. plp2 ENSDARG00000036630 193 0.842 - 0.842 - - - - - - - proteolipid protein 2 [Source:ZFIN;Acc:ZDB-GENE-030710-11]
98. zgc:66443 ENSDARG00000057707 624 0.841 - 0.841 - - - - - - - zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
99. nek2 ENSDARG00000005619 273 0.84 - 0.840 - - - - - - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
100. arhgap4a ENSDARG00000039265 181 0.84 - 0.840 - - - - - - - Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]

There are 1067 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA