Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for xrcc4

Gene Name Gene ID Reads Annotation
xrcc4 ENSDARG00000010732 553 X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]










Genes with expression patterns similar to xrcc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xrcc4 ENSDARG00000010732 553 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
2. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 2.248 - 0.724 0.711 - - - - 0.813 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
3. slc6a13l 121 1.705 - 0.901 - - - - 0.804 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
4. mogat3b ENSDARG00000003635 394 1.693 - 0.876 - - - - - 0.817 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
5. TNFRSF11B ENSDARG00000098377 98 1.673 - 0.894 - - - - - 0.779 - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
6. rbm22 ENSDARG00000010238 523 1.67 - 0.929 - - - - - 0.741 - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
7. pemt ENSDARG00000103614 474 1.625 - 0.837 - - - - 0.788 - - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
8. ttc19 ENSDARG00000074435 249 1.623 - 0.875 - - - 0.748 - - - tetratricopeptide repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-070912-490]
9. katnbl1 ENSDARG00000042522 1086 1.61 - 0.897 0.713 - - - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
10. dnajb9b ENSDARG00000016886 270 1.559 - 0.857 - - - - 0.702 - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
11. C2H1orf21 C2H1orf21 1120 1.55 - 0.829 - 0.721 - - - - -
12. AAED1 ENSDARG00000075299 406 1.532 0.751 0.781 - - - - - - - AhpC/TSA antioxidant enzyme domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110914-194]
13. cars ENSDARG00000036164 2019 1.523 - - - 0.778 - - - 0.745 - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
14. si:ch211-132g1.3 ENSDARG00000089477 769 1.512 - - - - - - - 0.803 0.709 si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
15. polr2m ENSDARG00000074968, ENSDARG00000113507 352 1.512 - 0.742 - - - - - 0.770 - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
16. trpc4apb ENSDARG00000020647 670 1.506 - 0.716 - - - - - 0.790 - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
17. pygl ENSDARG00000002197 192 1.504 - - 0.711 - - - - 0.793 - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
18. GATC ENSDARG00000056855 551 1.504 - 0.794 - - - - - - 0.710 glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
19. slc12a9 ENSDARG00000060366 293 1.459 0.708 - 0.751 - - - - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
20. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.449 - - - - - - 0.738 - 0.711 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
21. ZNF385D ENSDARG00000086162 202 1.442 - - 0.716 - - - - - 0.726 zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
22. CABZ01081897.1 ENSDARG00000110500 253 1.437 - - 0.736 0.701 - - - - -
23. lrrc1 ENSDARG00000102684 1054 1.425 - 0.721 - - - - - 0.704 - leucine rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-1]
24. CYP27B1 ENSDARG00000045015 119 0.947 - 0.947 - - - - - - - cytochrome P450, family 27, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-111005-2]
25. nek2 ENSDARG00000005619 273 0.947 - 0.947 - - - - - - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
26. il13ra1 ENSDARG00000080020 443 0.944 - 0.944 - - - - - - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
27. cdc45 ENSDARG00000043720 353 0.942 - 0.942 - - - - - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
28. BX465203.2 BX465203.2 23 0.941 - 0.941 - - - - - - -
29. fam83b ENSDARG00000078309 318 0.939 - 0.939 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
30. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.937 - 0.937 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
31. nudt15 ENSDARG00000113961 381 0.936 - 0.936 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
32. tm4sf4 ENSDARG00000040747 65 0.936 - 0.936 - - - - - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
33. kif3b ENSDARG00000101120 1158 0.934 - 0.934 - - - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
34. COBLL1 COBLL1 14 0.933 - 0.933 - - - - - - -
35. rxrab ENSDARG00000035127 231 0.931 - 0.931 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
36. irf2a ENSDARG00000007387 915 0.93 - 0.930 - - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
37. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.93 - 0.930 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
38. ccl25b ENSDARG00000070873 454 0.928 - 0.928 - - - - - - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
39. TRIM14_7 TRIM14_7 381 0.926 - 0.926 - - - - - - -
40. tango6 ENSDARG00000034001 203 0.926 - 0.926 - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
41. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 0.926 - 0.926 - - - - - - - adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
42. pole ENSDARG00000058533, ENSDARG00000115430 381 0.924 - 0.924 - - - - - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
43. ctbp2 ctbp2 3255 0.921 - 0.921 - - - - - - -
44. itsn1 ENSDARG00000000086 684 0.921 - 0.921 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
45. zgc:152938 ENSDARG00000102586 97 0.919 - 0.919 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
46. btbd9 ENSDARG00000068983 356 0.919 - 0.919 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
47. ttpal ENSDARG00000070644, ENSDARG00000112925 471 0.919 - 0.919 - - - - - - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
48. CABZ01071909.1_1 ENSDARG00000117524 86 0.917 - 0.917 - - - - - - -
49. pura pura 1854 0.917 - 0.917 - - - - - - -
50. THEM6_1 ENSDARG00000103914 469 0.917 - 0.917 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
51. MAL2 ENSDARG00000077637 152 0.917 - 0.917 - - - - - - - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
52. orc5 ENSDARG00000021579 536 0.916 - 0.916 - - - - - - - origin recognition complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2275]
53. cry1b cry1b 152 0.916 - 0.916 - - - - - - -
54. rfng ENSDARG00000019746 627 0.916 - 0.916 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5418]
55. bmp7a ENSDARG00000018260 92 0.916 - 0.916 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
56. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.915 - 0.915 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
57. TC2N ENSDARG00000095067 146 0.915 - 0.915 - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
58. entpd2a.2 ENSDARG00000033953 389 0.915 - 0.915 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
59. tctex1d2 ENSDARG00000054255 320 0.914 - 0.914 - - - - - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
60. dre-mir-222a ENSDARG00000090347 131 0.914 - 0.914 - - - - - - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
61. si:ch211-214e3.5 ENSDARG00000074270 755 0.914 - 0.914 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
62. CR925758.1 CR925758.1 83 0.914 - 0.914 - - - - - - -
63. CR354432.1 CR354432.1 424 0.913 - 0.913 - - - - - - -
64. mettl6 ENSDARG00000070085 366 0.913 - 0.913 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
65. GFRAL ENSDARG00000089709 167 0.913 - 0.913 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
66. polr1c ENSDARG00000039400 606 0.913 - 0.913 - - - - - - - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
67. wdyhv1 ENSDARG00000070403 42 0.913 - 0.913 - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
68. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.912 - 0.912 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
69. grip2b ENSDARG00000027618 9 0.912 - 0.912 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
70. si:ch211-255g12.8 ENSDARG00000069627 22 0.912 - 0.912 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
71. dio2 ENSDARG00000094857 17 0.912 - 0.912 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
72. BX004816.4 BX004816.4 33 0.912 - 0.912 - - - - - - -
73. SNORA53 SNORA53 10 0.912 - 0.912 - - - - - - -
74. slc43a3b ENSDARG00000057949 194 0.912 - 0.912 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
75. dpt ENSDARG00000056178 7 0.912 - 0.912 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
76. zgc:92326 zgc:92326 94 0.912 - 0.912 - - - - - - -
77. tirap ENSDARG00000074371 10 0.912 - 0.912 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
78. tmprss13a ENSDARG00000100969 84 0.912 - 0.912 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
79. GPR97 GPR97 9 0.912 - 0.912 - - - - - - -
80. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 0.912 - 0.912 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
81. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.912 - 0.912 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
82. klhdc8b ENSDARG00000090787 33 0.912 - 0.912 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
83. si:ch211-236p5.2 ENSDARG00000086256 8 0.912 - 0.912 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
84. CU929163.1 CU929163.1 11 0.912 - 0.912 - - - - - - -
85. si:ch211-284e13.4 ENSDARG00000060330 6 0.912 - 0.912 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
86. si:dkey-192i18.3 si:dkey-192i18.3 47 0.912 - 0.912 - - - - - - -
87. si:dkey-173l11.3 si:dkey-173l11.3 14 0.912 - 0.912 - - - - - - -
88. CABZ01081656.1 CABZ01081656.1 14 0.912 - 0.912 - - - - - - -
89. elavl2 ENSDARG00000040732 44 0.912 - 0.912 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
90. si:dkey-52k20.13 si:dkey-52k20.13 428 0.911 - 0.911 - - - - - - -
91. sfmbt2 ENSDARG00000045519 251 0.911 - 0.911 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
92. sdk1a ENSDARG00000078866 159 0.911 - 0.911 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
93. cdx1a ENSDARG00000114554 28 0.91 - 0.910 - - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
94. rdh8a ENSDARG00000028048 334 0.91 - 0.910 - - - - - - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
95. gng8 ENSDARG00000042970 117 0.91 - 0.910 - - - - - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
96. stk38l ENSDARG00000045482 266 0.91 - 0.910 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
97. si:ch1073-228j22.1 ENSDARG00000095799 98 0.91 - 0.910 - - - - - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
98. MSI1 ENSDARG00000010710 478 0.91 - 0.910 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
99. col12a1a ENSDARG00000078322 1833 0.909 - 0.909 - - - - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
100. CABZ01087670.1 CABZ01087670.1 411 0.908 - 0.908 - - - - - - -

There are 845 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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