Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for xirp2a

Gene Name Gene ID Reads Annotation
xirp2a ENSDARG00000071113 7113 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]










Genes with expression patterns similar to xirp2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xirp2a ENSDARG00000071113 7113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
2. srl ENSDARG00000104587 11126 4.296 0.912 0.916 - 0.703 0.816 - 0.949 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
3. trdn ENSDARG00000041779 4283 4.262 0.928 0.879 - - 0.705 0.820 0.930 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
4. sptb ENSDARG00000030490 7128 4.259 0.852 0.842 - - - 0.831 0.952 - 0.782 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
5. smtnl1 ENSDARG00000041257 7410 4.177 0.929 - 0.824 - - 0.770 0.951 - 0.703 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
6. txlnbb ENSDARG00000076241 6396 4.17 0.850 0.892 - - 0.721 0.783 0.924 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
7. myod1 ENSDARG00000030110 6019 4.163 0.894 0.839 - - - 0.721 0.938 - 0.771 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
8. tnnc1b ENSDARG00000037539 13945 4.154 - 0.861 - - - 0.848 0.930 0.717 0.798 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
9. ntmt1 ENSDARG00000022399 5779 4.121 0.880 0.888 - - 0.755 0.709 0.889 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
10. nexn ENSDARG00000057317 10972 4.115 0.946 - - 0.707 - 0.730 0.943 - 0.789 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
11. klhl41b ENSDARG00000006757 10762 4.096 0.906 - - - 0.705 0.804 0.933 - 0.748 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
12. chrna1 ENSDARG00000009021 2931 4.087 0.862 0.855 - - - 0.712 0.893 - 0.765 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
13. MYOT ENSDARG00000076312 1791 4.013 0.864 0.787 - - - 0.794 0.867 - 0.701 myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
14. fitm1 ENSDARG00000056464 1759 3.453 0.848 0.879 - - - 0.820 0.906 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
15. prx ENSDARG00000017246 6183 3.449 0.857 0.882 - - - - 0.949 - 0.761 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
16. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.431 0.886 0.907 - - - 0.744 0.894 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
17. trim55a ENSDARG00000029596 2858 3.426 0.814 0.865 - - - 0.884 0.863 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
18. C13H10orf71 3489 3.425 0.895 0.910 - - 0.723 - 0.897 - - chromosome 13 C10orf71 homolog
19. klhl40a ENSDARG00000039052 2537 3.411 0.870 0.906 - - - - 0.902 - 0.733 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
20. NRAP ENSDARG00000009341 3565 3.396 0.873 0.851 - - - - 0.930 0.742 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
21. adss ENSDARG00000002071 5497 3.384 0.857 - - 0.870 0.706 - 0.951 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
22. znf106a ENSDARG00000016651 6049 3.38 0.866 0.829 - - 0.737 - 0.948 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
23. myhc4 ENSDARG00000035438 1322 3.376 0.759 0.937 - - - 0.770 0.910 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
24. gypc ENSDARG00000041546 1487 3.373 0.818 0.843 - - - 0.786 0.926 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
25. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.369 0.878 - - - 0.753 0.817 0.921 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
26. cap2 ENSDARG00000104478 3266 3.366 0.823 0.736 - - - 0.858 0.949 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
27. ryr3 ENSDARG00000071331 6795 3.364 0.814 0.842 - - - 0.777 0.931 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
28. akap6 ENSDARG00000077295 1382 3.34 0.883 0.802 - 0.728 - - 0.927 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
29. limch1a ENSDARG00000074275 2981 3.34 0.858 0.813 - - - - 0.905 - 0.764 LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
30. stac3 ENSDARG00000098883 1765 3.338 0.854 0.862 - - - 0.750 0.872 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
31. COL22A1 COL22A1 4473 3.334 0.817 0.889 - - 0.703 - 0.925 - -
32. CR847973.1 ENSDARG00000115516 8754 3.325 0.850 0.827 - - - 0.781 0.867 - -
33. unc45b ENSDARG00000008433 8298 3.322 0.927 - - 0.709 - - 0.958 - 0.728 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
34. tnnt2d ENSDARG00000002988 7590 3.322 0.869 0.772 - - - 0.796 0.885 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
35. asb5b ENSDARG00000053222 1207 3.316 0.817 0.898 - - - 0.757 0.844 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
36. EHBP1L1 EHBP1L1 2500 3.298 0.827 0.844 - - - 0.700 0.927 - -
37. si:ch211-156j16.1 ENSDARG00000092035 7441 3.296 0.902 - - - - - 0.956 0.704 0.734 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
38. pbxip1a ENSDARG00000071015 4960 3.295 0.787 0.874 - 0.748 - - 0.886 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
39. PTGES3L PTGES3L 4801 3.291 0.894 - - - - 0.753 0.917 - 0.727
40. zgc:158296 ENSDARG00000070923 3935 3.29 - 0.819 - - - 0.812 0.954 - 0.705 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
41. jph2 ENSDARG00000028625 6706 3.282 0.844 - - - 0.717 0.805 0.916 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
42. MUSTN1 MUSTN1 1882 3.278 0.744 0.844 - 0.793 - - 0.897 - -
43. MYOM3 2720 3.277 0.824 0.794 - - - 0.797 0.862 - - myomesin 3, transcript variant X2
44. tns1 tns1 5891 3.269 0.855 0.835 - 0.703 - - 0.876 - -
45. tnnt2c ENSDARG00000032242 28801 3.268 0.833 - - 0.772 0.759 - 0.904 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
46. rp42-pen rp42-pen 3395 3.247 - 0.867 - 0.750 - 0.714 0.916 - -
47. smyd2b ENSDARG00000005629 8181 3.229 0.892 0.900 - - 0.706 0.731 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
48. ptrfa ptrfa 4363 3.212 0.906 0.797 - - - 0.787 - - 0.722
49. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.21 0.745 - - - 0.799 - 0.946 - 0.720 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
50. alpk2 ENSDARG00000079637 1483 3.199 0.806 0.738 - - - 0.750 0.905 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
51. TRIM63 TRIM63 1600 3.188 0.785 0.769 - - - 0.730 0.904 - -
52. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.176 0.788 0.776 - - - 0.729 0.883 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
53. mafa ENSDARG00000015890 2140 3.169 0.804 - - - - 0.729 0.875 - 0.761 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
54. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.167 0.795 0.802 - - - 0.744 0.826 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
55. sox6 ENSDARG00000015536 7728 3.162 0.855 - 0.736 - - - 0.867 - 0.704 SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
56. sucla2 ENSDARG00000005359 5992 3.138 0.806 0.830 - - - 0.719 - - 0.783 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
57. PTP4A3 ENSDARG00000039997 3814 3.138 0.795 0.827 - - - 0.724 0.792 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
58. METTL21C METTL21C 1717 3.112 0.779 - - 0.734 - 0.740 0.859 - -
59. tnni2b.1 ENSDARG00000035958 51597 3.086 0.822 - - - 0.755 - - 0.711 0.798 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
60. tmem161a ENSDARG00000012790 16094 3.084 0.886 - - 0.713 0.769 - 0.716 - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
61. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 3.07 0.732 0.729 0.739 - - - 0.870 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
62. pbxip1b ENSDARG00000011824 3726 3.004 0.791 - 0.750 0.762 0.701 - - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
63. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.951 0.742 - - - - 0.723 - 0.759 0.727
64. BX470254.1 ENSDARG00000097402 1389 2.947 0.720 0.788 - - - - 0.723 - 0.716
65. BX530018.3 ENSDARG00000107022 614 2.729 0.882 0.890 - - - - 0.957 - -
66. sh3bgr ENSDARG00000021633 3498 2.701 0.889 0.866 - - - - 0.946 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
67. pygma ENSDARG00000055518 15972 2.688 0.912 0.873 - - - - 0.903 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
68. BX294434.1 ENSDARG00000061272 6493 2.682 0.855 0.869 - - - - 0.958 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
69. ITGB1BP2 ENSDARG00000030176 2472 2.672 0.865 0.853 - - - - 0.954 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
70. cacng1 cacng1 3118 2.671 0.871 0.899 - - - - 0.901 - -
71. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.67 0.842 0.870 - - - - 0.958 - -
72. hapln1a ENSDARG00000089769 12334 2.656 0.877 0.866 - - - - 0.913 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
73. CU633479.5 ENSDARG00000114818 1815 2.633 0.833 0.884 - - - - 0.916 - -
74. mybpc2b ENSDARG00000021265 9618 2.627 0.849 0.913 - - - - 0.865 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
75. jph1a ENSDARG00000058603 2852 2.62 - 0.875 - - - 0.826 0.919 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
76. PTPLA PTPLA 4044 2.619 0.882 0.792 - - - - 0.945 - -
77. lama2 ENSDARG00000099390 24734 2.614 0.956 - - - 0.805 - 0.853 - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
78. TMPO TMPO 3264 2.606 0.864 0.822 - - - - 0.920 - -
79. cmya5 ENSDARG00000061379 1423 2.605 0.848 0.851 - - - - 0.906 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
80. hhatla ENSDARG00000039051 6598 2.601 0.842 0.828 - - - - 0.931 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
81. ube2d4 ENSDARG00000015057 1089 2.594 0.898 0.883 - - - - 0.813 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
82. kcnma1a ENSDARG00000079840 2584 2.59 0.856 0.830 - - - - 0.904 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
83. rtn2a ENSDARG00000016088 12184 2.59 0.902 - - - 0.728 - 0.960 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
84. MYOM1 MYOM1 3870 2.59 0.811 0.863 - - - - 0.916 - -
85. TENC1 TENC1 1729 2.59 0.848 0.878 - - - - 0.864 - -
86. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.585 0.824 0.855 - - - - 0.906 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
87. cfl2 ENSDARG00000014106 8051 2.583 0.879 0.897 - - - - 0.807 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
88. CR354540.2 ENSDARG00000117517 18452 2.575 0.918 - - 0.711 - - 0.946 - -
89. hsp90aa1.1 ENSDARG00000010478 47784 2.575 0.756 - - - - 0.871 0.948 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
90. zgc:92518 ENSDARG00000016343 3837 2.573 0.870 - - - - 0.754 0.949 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
91. usp28 ENSDARG00000008880 1850 2.573 0.860 0.798 - - - - 0.915 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
92. alpk3a ENSDARG00000078989 1992 2.569 0.808 0.924 - - - - 0.837 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
93. nmrk2 ENSDARG00000067848 10293 2.565 - 0.905 - 0.716 - - 0.944 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
94. tnc ENSDARG00000021948, ENSDARG00000113518 12162 2.564 0.847 0.911 - - - - 0.806 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
95. tnw 16679 2.562 0.739 0.890 - - - - 0.933 - - tenascin W, transcript variant X2
96. sgcd ENSDARG00000098573 4980 2.56 0.823 - - - - - 0.938 - 0.799 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
97. myhz2 ENSDARG00000012944 69921 2.556 0.910 - - - 0.741 - 0.905 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
98. actn3b ENSDARG00000001431 15747 2.551 0.890 0.950 - - 0.711 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
99. cacna2d1a ENSDARG00000014804 1924 2.55 0.806 0.806 - - - - 0.938 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
100. cnbpb ENSDARG00000070922 14606 2.548 0.780 - - - - 0.856 0.912 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]

There are 1530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA