Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for xirp1

Gene Name Gene ID Reads Annotation
xirp1 ENSDARG00000030722 1486 xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]










Genes with expression patterns similar to xirp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xirp1 ENSDARG00000030722 1486 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
2. klhl41a ENSDARG00000068888 1034 2.64 0.777 0.865 - - - 0.998 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
3. atpaf1 ENSDARG00000042799 1309 2.286 - 0.759 - - - - 0.725 0.802 - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
4. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.28 0.771 0.734 - - - - - 0.775 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
5. VPS37C ENSDARG00000031836 906 1.811 - - - - - 0.997 - 0.814 - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
6. usp28 ENSDARG00000008880 1850 1.787 0.797 - - - - 0.990 - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
7. pes ENSDARG00000018902 3286 1.775 - 0.777 - - - 0.998 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
8. CASKIN2_1 CASKIN2_1 2299 1.763 - 0.764 - - - 0.999 - - -
9. lap3 ENSDARG00000061981 1188 1.753 - 0.756 - - - 0.997 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
10. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.747 - 0.783 - - - 0.964 - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
11. hfe2 4113 1.742 - 0.799 - - - - - 0.943 - hemochromatosis type 2
12. ryr1b ENSDARG00000023797 5693 1.726 - 0.832 - - - 0.894 - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
13. uggt1 ENSDARG00000054746 2060 1.723 - - - - - 0.998 0.725 - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
14. chrnd ENSDARG00000019342 2728 1.722 - 0.732 - - - 0.990 - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
15. ndufa11 ENSDARG00000042777 2757 1.708 - - - - - 0.983 - 0.725 - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
16. lamb2 ENSDARG00000002084 3265 1.708 - 0.728 - - - 0.980 - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
17. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 1.708 - - - - - 0.995 - 0.713 - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
18. BX004880.2 BX004880.2 83 1.705 - - - - - - 0.743 0.962 -
19. pcmt ENSDARG00000015201 5132 1.672 - 0.703 - - - 0.969 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
20. cops5 ENSDARG00000057624 1485 1.671 - 0.762 - - - - - 0.909 - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
21. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.671 - 0.800 - - - - - 0.871 - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
22. slc5a6 slc5a6 224 1.658 - - - - - - 0.705 0.953 -
23. utp3 ENSDARG00000056720 922 1.617 - 0.842 - - - - 0.775 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
24. alpk2 ENSDARG00000079637 1483 1.605 0.742 0.863 - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
25. znf106a ENSDARG00000016651 6049 1.601 0.790 0.811 - - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
26. elp5 ENSDARG00000067918 541 1.597 - 0.724 - - - - - 0.873 - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
27. IGFN1 IGFN1 5030 1.593 0.841 0.752 - - - - - - -
28. plecb ENSDARG00000021987 13621 1.576 0.772 0.804 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
29. hapln1a ENSDARG00000089769 12334 1.573 0.790 0.783 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
30. MYOT ENSDARG00000076312 1791 1.571 0.753 0.818 - - - - - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
31. aqp1a.1 ENSDARG00000023713 3237 1.57 0.821 0.749 - - - - - - - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
32. zgc:110655 zgc:110655 4237 1.569 0.811 0.758 - - - - - - -
33. klhl40a ENSDARG00000039052 2537 1.568 0.745 0.823 - - - - - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
34. cfl2 ENSDARG00000014106 8051 1.565 0.726 0.839 - - - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
35. ptrfa ptrfa 4363 1.562 0.765 0.797 - - - - - - -
36. psip1 psip1 308 1.562 - 0.767 - - - - 0.795 - -
37. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.562 - 0.702 - - - - - 0.860 - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
38. ube2d4 ENSDARG00000015057 1089 1.561 0.714 0.847 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
39. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 1.554 - 0.738 - - - - - 0.816 - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
40. tmem223 ENSDARG00000069494 1528 1.553 - 0.838 - - - - 0.715 - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
41. dnah5 ENSDARG00000087373 168 1.55 - 0.716 - - - - - 0.834 - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
42. neurl1b ENSDARG00000099694 716 1.547 - 0.708 - - - - 0.839 - - neuralized E3 ubiquitin protein ligase 1B [Source:ZFIN;Acc:ZDB-GENE-050522-102]
43. mir133b_1 671 1.54 0.765 0.775 - - - - - - - microRNA 133b
44. slc43a1b ENSDARG00000037748 1406 1.536 - 0.712 - - - - - 0.824 - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
45. ehbp1l1b ENSDARG00000079895 559 1.536 0.780 0.756 - - - - - - - EH domain binding protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-238]
46. PXN PXN 395 1.528 0.774 0.754 - - - - - - -
47. alpk3a ENSDARG00000078989 1992 1.527 0.710 0.817 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
48. pno1 ENSDARG00000008502 4547 1.526 - 0.760 - - - - 0.766 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
49. tns1 tns1 5891 1.524 0.769 0.755 - - - - - - -
50. cdkal1 ENSDARG00000104848 2102 1.522 0.705 0.817 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
51. sorbs1 ENSDARG00000103435 2297 1.52 - 0.757 - - - - 0.763 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
52. tbl3 ENSDARG00000052344 1530 1.517 0.727 0.790 - - - - - - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
53. zgc:113100 zgc:113100 647 1.508 - - - - - - 0.706 0.802 -
54. MYOM3 2720 1.507 0.726 0.781 - - - - - - - myomesin 3, transcript variant X2
55. grpel2 ENSDARG00000069421 5673 1.507 0.730 0.777 - - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
56. ORC2 ENSDARG00000101465 399 1.505 - 0.747 - - - - 0.758 - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
57. polr1a ENSDARG00000098375 1224 1.503 - 0.768 - - - - - 0.735 - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
58. actn3b ENSDARG00000001431 15747 1.503 0.727 0.776 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
59. limch1a ENSDARG00000074275 2981 1.5 0.709 0.791 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
60. chrna1 ENSDARG00000009021 2931 1.495 0.756 0.739 - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
61. nop56 ENSDARG00000012820 15231 1.489 0.744 0.745 - - - - - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
62. rhoj ENSDARG00000020250 1522 1.485 0.765 - - - - - - 0.720 - ras homolog family member J [Source:ZFIN;Acc:ZDB-GENE-040724-272]
63. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.482 0.700 0.782 - - - - - - -
64. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.473 0.716 0.757 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
65. vwde ENSDARG00000103443 5758 1.458 0.710 0.748 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
66. prkag2 prkag2 355 1.455 - 0.704 - - - - 0.751 - -
67. cacna2d1a ENSDARG00000014804 1924 1.455 0.749 0.706 - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
68. xirp2a ENSDARG00000071113 7113 1.455 0.726 0.729 - - - - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
69. trdn ENSDARG00000041779 4283 1.447 0.742 0.705 - - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
70. pcyt1aa ENSDARG00000011233 1985 1.445 0.710 0.735 - - - - - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
71. mrpl48 ENSDARG00000035167 1008 1.444 0.724 0.720 - - - - - - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
72. nmt1b ENSDARG00000057206 654 1.437 - 0.732 - - - - - 0.705 - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
73. dtnba ENSDARG00000077694 5483 1.418 0.703 0.715 - - - - - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
74. dtna ENSDARG00000031015 1746 1.413 0.701 0.712 - - - - - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
75. zgc:92907 ENSDARG00000011026 986 1.409 - 0.701 - - - - 0.708 - - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
76. PRIM2 ENSDARG00000052721 825 1 - - - - - 1.000 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
77. TRIM35_3 TRIM35_3 172 0.999 - - - - - 0.999 - - -
78. mcts1 ENSDARG00000025972 4662 0.999 - - - - - 0.999 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
79. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - 0.999 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
80. zmynd8 ENSDARG00000007601 405 0.999 - - - - - 0.999 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
81. sec63 ENSDARG00000017740 3789 0.999 - - - - - 0.999 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
82. amt ENSDARG00000010862, ENSDARG00000113280 367 0.999 - - - - - 0.999 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
83. CREM CREM 1333 0.999 - - - - - 0.999 - - -
84. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.999 - - - - - 0.999 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
85. yipf1 ENSDARG00000014474 542 0.999 - - - - - 0.999 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
86. zgc:112484 zgc:112484 780 0.999 - - - - - 0.999 - - -
87. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.999 - - - - - 0.999 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
88. SLC6A16 SLC6A16 630 0.999 - - - - - 0.999 - - -
89. nog2 ENSDARG00000043066 233 0.999 - - - - - 0.999 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
90. rbm42 ENSDARG00000039910 1111 0.999 - - - - - 0.999 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
91. clip2 ENSDARG00000059596 529 0.999 - - - - - 0.999 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
92. mrpl41 ENSDARG00000002264 1756 0.999 - - - - - 0.999 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
93. cyb561a3a ENSDARG00000056281 667 0.999 - - - - - 0.999 - - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
94. pbxip1b ENSDARG00000011824 3726 0.999 - - - - - 0.999 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
95. si:ch211-163l21.8 ENSDARG00000042899 724 0.999 - - - - - 0.999 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
96. pank2 ENSDARG00000003311 881 0.999 - - - - - 0.999 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
97. yes1 ENSDARG00000005941 3577 0.999 - - - - - 0.999 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
98. C9H2orf76 C9H2orf76 559 0.999 - - - - - 0.999 - - -
99. dfna5 dfna5 361 0.999 - - - - - 0.999 - - -
100. eva1a ENSDARG00000061405 896 0.999 - - - - - 0.999 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]

There are 1254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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