Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for xab2

Gene Name Gene ID Reads Annotation
xab2 ENSDARG00000007092 229 XPA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-685]










Genes with expression patterns similar to xab2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xab2 ENSDARG00000007092 229 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 XPA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-685]
2. grin2aa ENSDARG00000034493 75 1.524 - - - - - 0.755 0.769 - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a [Source:ZFIN;Acc:ZDB-GENE-070424-129]
3. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.497 - 0.755 - - - - 0.742 - - si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
4. cntfr ENSDARG00000028661 1150 1.486 - 0.782 - - - - 0.704 - - ciliary neurotrophic factor receptor [Source:ZFIN;Acc:ZDB-GENE-030616-82]
5. kat8 ENSDARG00000027187, ENSDARG00000110821, ENSDARG00000111825 1110 1.444 - 0.715 - - - - 0.729 - - K(lysine) acetyltransferase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-7510]
6. BX465841.1 BX465841.1 47 1.421 - - - - 0.712 0.709 - - -
7. si:dkey-240h12.4 ENSDARG00000034210 114 0.9 - 0.900 - - - - - - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
8. trps1 ENSDARG00000104082 918 0.876 - - - - - - 0.876 - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
9. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.865 - 0.865 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
10. FP102892.2 FP102892.2 809 0.865 - - - - - - 0.865 - -
11. fam49a ENSDARG00000006672 939 0.856 - - - - - - 0.856 - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
12. CU984580.1 CU984580.1 141 0.853 - - - - - - 0.853 - -
13. ift172 ENSDARG00000041870 1239 0.852 - 0.852 - - - - - - - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
14. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.852 - - - - - - 0.852 - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
15. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 0.85 - - - - - - 0.850 - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
16. kdm4ab ENSDARG00000019103 521 0.849 - 0.849 - - - - - - - lysine (K)-specific demethylase 4A, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-6279]
17. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.846 - 0.846 - - - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
18. zswim5 ENSDARG00000055900 4243 0.844 - - - - - - 0.844 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
19. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 0.841 - - - - 0.841 - - - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
20. SRR SRR 544 0.84 - - - - - 0.840 - - -
21. si:dkey-9i23.15 ENSDARG00000093997 544 0.838 - 0.838 - - - - - - - si:dkey-9i23.15 [Source:ZFIN;Acc:ZDB-GENE-090313-361]
22. dis3l ENSDARG00000053200, ENSDARG00000112358 267 0.837 - - - - 0.837 - - - - DIS3 like exosome 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-070209-95]
23. CABZ01068153.1 CABZ01068153.1 211 0.836 - - - - - - - - 0.836
24. kif16ba ENSDARG00000100225 114 0.833 - - - - - - 0.833 - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
25. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 0.833 - - - - - 0.833 - - - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
26. snx11 ENSDARG00000052522 1030 0.828 - 0.828 - - - - - - - sorting nexin 11 [Source:ZFIN;Acc:ZDB-GENE-041111-253]
27. ascc2 ENSDARG00000013058 228 0.827 - - - - - - 0.827 - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
28. psen1 ENSDARG00000004870 1590 0.823 - 0.823 - - - - - - - presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
29. si:dkey-246i14.3 ENSDARG00000090427 365 0.823 - 0.823 - - - - - - - si:dkey-246i14.3 [Source:ZFIN;Acc:ZDB-GENE-100922-64]
30. elk1 ENSDARG00000078066 414 0.822 - 0.822 - - - - - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
31. cacnb4b ENSDARG00000062174 159 0.82 - - - - - - 0.820 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
32. TTC9 ENSDARG00000074363 196 0.82 - - - - - - 0.820 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
33. slc27a4 ENSDARG00000017047, ENSDARG00000113602 811 0.819 - - - - - - 0.819 - - solute carrier family 27 (fatty acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-248]
34. CABZ01032352.1 CABZ01032352.1 122 0.816 - - - - - - 0.816 - -
35. gli2a ENSDARG00000025641 2154 0.816 - 0.816 - - - - - - - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
36. siah1 ENSDARG00000030871 1590 0.814 - - - - - - 0.814 - - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
37. xkr8.3 ENSDARG00000039996 457 0.812 - - - - - 0.812 - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041010-107]
38. rasa3 ENSDARG00000063371 227 0.812 - - - - - - 0.812 - - RAS p21 protein activator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-21]
39. tmed8 ENSDARG00000052390 469 0.811 - 0.811 - - - - - - - transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]
40. GSK3B ENSDARG00000017803 275 0.809 - - - - - - 0.809 - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
41. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 0.806 - - - - - - 0.806 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
42. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.806 0.806 - - - - - - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
43. KIF2A_1 ENSDARG00000043571 189 0.803 - - - - - - 0.803 - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
44. WIPF1 WIPF1 32 0.8 - - - - - 0.800 - - -
45. rd3 ENSDARG00000031600 1085 0.798 - - - - - 0.798 - - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
46. scn3b ENSDARG00000062359 242 0.798 - - - - - 0.798 - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
47. znf438 ENSDARG00000061311 524 0.796 - - - 0.796 - - - - - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
48. kcnip1a 101 0.795 - - - - - - 0.795 - - Kv channel interacting protein 1 a
49. gipc1 ENSDARG00000104483 2913 0.795 - - - - - - 0.795 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
50. usp54a ENSDARG00000077948, ENSDARG00000112037 406 0.795 - 0.795 - - - - - - - ubiquitin specific peptidase 54a [Source:ZFIN;Acc:ZDB-GENE-090828-2]
51. si:dkey-47k16.3 si:dkey-47k16.3 17 0.794 - - - - - 0.794 - - -
52. btr16 ENSDARG00000028850 21 0.794 - - - - - 0.794 - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
53. clock3 clock3 136 0.793 - - - 0.793 - - - - -
54. wu:fc26g07 wu:fc26g07 1165 0.792 - 0.792 - - - - - - -
55. poc5 ENSDARG00000059982 569 0.791 - - - - 0.791 - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
56. atl1 ENSDARG00000060481 251 0.791 - - - - - - 0.791 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
57. amt ENSDARG00000010862, ENSDARG00000113280 367 0.791 - 0.791 - - - - - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
58. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 0.789 - - - - - - - - 0.789 finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
59. ap3m2 ENSDARG00000016128 851 0.788 - - - - - - 0.788 - - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
60. nalcn ENSDARG00000001835 294 0.787 - - - - - - 0.787 - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
61. pex26 ENSDARG00000073858 244 0.787 - 0.787 - - - - - - - peroxisomal biogenesis factor 26 [Source:ZFIN;Acc:ZDB-GENE-030131-6584]
62. si:ch211-117c9.5 ENSDARG00000071235 154 0.787 - - - 0.787 - - - - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
63. jarid2b ENSDARG00000062268 2206 0.786 - - - - - - 0.786 - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
64. BX255969.1 BX255969.1 16 0.784 - - - - - 0.784 - - -
65. tprb ENSDARG00000016630 274 0.784 - - - - - 0.784 - - - translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]
66. pprc1 ENSDARG00000090337 434 0.783 - - - 0.783 - - - - - peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9858]
67. rev3l ENSDARG00000058801 784 0.783 - - - - - - 0.783 - - REV3-like, polymerase (DNA directed), zeta, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050302-55]
68. necab2 ENSDARG00000056745, ENSDARG00000110976 304 0.782 - - - - - - 0.782 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
69. ctnna2 ENSDARG00000024785 968 0.782 - - - - - - 0.782 - - catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]
70. CR384099.1 ENSDARG00000089193 193 0.782 - 0.782 - - - - - - -
71. CARD14 ENSDARG00000103485 888 0.782 - 0.782 - - - - - - - caspase recruitment domain family, member 14 [Source:ZFIN;Acc:ZDB-GENE-090310-1]
72. tmem145 ENSDARG00000088342 183 0.782 - 0.782 - - - - - - - transmembrane protein 145 [Source:ZFIN;Acc:ZDB-GENE-110411-84]
73. trmt61a ENSDARG00000008480 464 0.781 - - - - - 0.781 - - - tRNA methyltransferase 61A [Source:ZFIN;Acc:ZDB-GENE-040718-5]
74. zmym4 ENSDARG00000035823 347 0.781 - - - - - - 0.781 - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
75. kcnn1b ENSDARG00000023546 152 0.781 - - - - - - 0.781 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
76. TRIM35_4 TRIM35_4 63 0.78 - 0.780 - - - - - - -
77. ccdc80l2 ENSDARG00000044695 150 0.78 - - - 0.780 - - - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
78. PAOX PAOX 251 0.778 - - - - - - 0.778 - -
79. lmnl3 ENSDARG00000007751 158 0.778 - - - - - - 0.778 - - lamin L3 [Source:ZFIN;Acc:ZDB-GENE-020424-4]
80. PMFBP1 ENSDARG00000101917 292 0.777 - - - - - - 0.777 - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
81. robo1 ENSDARG00000026784 125 0.776 - - - - - 0.776 - - - roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]
82. ipo4 ENSDARG00000041493 1578 0.776 - - - - - - 0.776 - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
83. ENSDARG00000023499 ENSDARG00000023499 395 0.776 - - - 0.776 - - - - -
84. arl3 ENSDARG00000071409, ENSDARG00000113228 2130 0.776 - - - - - - 0.776 - - ADP-ribosylation factor-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7518]
85. CMTM8_1 CMTM8_1 123 0.774 - - - - - 0.774 - - -
86. CR936975.4 CR936975.4 235 0.774 - 0.774 - - - - - - -
87. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 0.774 - - - 0.774 - - - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
88. BX682552.2 BX682552.2 1427 0.772 - 0.772 - - - - - - -
89. chd7 ENSDARG00000075211 12085 0.772 - - - - - - 0.772 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
90. camk4 ENSDARG00000005372 118 0.77 - - - - - - 0.770 - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
91. try 21 0.77 - - - - - 0.770 - - - trypsin
92. agtpbp1 ENSDARG00000105214 1038 0.77 0.770 - - - - - - - - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
93. tbc1d12a ENSDARG00000038237 698 0.77 - - - 0.770 - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
94. SNORA19 SNORA19 24 0.769 - - - - - 0.769 - - -
95. zgc:101560 1 0.769 - - - - - 0.769 - - - zgc:101560, transcript variant 2
96. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 0.769 - - - - - 0.769 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
97. zgc:171673 ENSDARG00000102473 256 0.769 - - - - - - 0.769 - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
98. fam26f 595 0.769 - - - - - 0.769 - - - family with sequence similarity 26, member F
99. wu:fc32g12 wu:fc32g12 198 0.768 - - - - - - 0.768 - -
100. FP236513.2 FP236513.2 443 0.767 - 0.767 - - - - - - -

There are 304 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA