Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for wu:fk48d07

Gene Name Gene ID Reads Annotation
wu:fk48d07 wu:fk48d07 13245










Genes with expression patterns similar to wu:fk48d07

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. wu:fk48d07 wu:fk48d07 13245 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.606 - 0.853 - - - 0.875 - - 0.878 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
3. fubp1 ENSDARG00000029248 15259 2.54 - 0.869 - 0.835 - 0.836 - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
4. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 2.504 0.743 0.853 - - - 0.908 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
5. eif2s3 ENSDARG00000008292 17051 2.458 0.713 - - - - 0.852 0.893 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
6. stmn1a ENSDARG00000004169 21169 2.445 0.704 - - - - 0.928 - - 0.813 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
7. hnrnpub ENSDARG00000004735 16496 2.441 0.803 - - 0.745 - - - - 0.893 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
8. MAP4K4 ENSDARG00000098670 4665 2.439 - 0.817 - - - - 0.786 - 0.836 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
9. mbd3a ENSDARG00000061774 4047 2.389 0.717 - - - - - 0.901 - 0.771 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
10. sumo2b ENSDARG00000102741 18514 2.381 0.746 - - - - - 0.877 0.758 - small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
11. taf9 ENSDARG00000077870 6992 2.358 0.719 0.920 - - - - - - 0.719 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
12. eif3s10 ENSDARG00000076815 10822 2.351 - - - - 0.706 - 0.886 - 0.759 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
13. srsf2a ENSDARG00000057484 25721 2.344 - - - 0.715 - 0.909 - - 0.720 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
14. TAF15 ENSDARG00000070019 5102 2.325 0.741 - - 0.717 - - - - 0.867 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
15. ppm1g ENSDARG00000075559 6516 2.324 0.767 - 0.835 - - - - - 0.722 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
16. marcksl1b ENSDARG00000035715 37390 2.314 0.729 - - 0.747 - - - - 0.838 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
17. kpna2 ENSDARG00000038066 7954 2.306 - 0.844 - 0.717 - - - - 0.745 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
18. hmgb3a ENSDARG00000056725 15668 2.294 0.810 - 0.702 - - - - - 0.782 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
19. dla ENSDARG00000010791 9281 2.294 0.723 - 0.784 - - - - - 0.787 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
20. dlb ENSDARG00000004232 5120 2.293 - - 0.711 0.736 - - - - 0.846 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
21. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.29 - - - 0.739 - - 0.726 - 0.825 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
22. khsrp ENSDARG00000026489 15738 2.268 0.704 - 0.816 - - - - - 0.748 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
23. g3bp1 ENSDARG00000017741 7622 2.243 - - - 0.740 0.703 - - - 0.800 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
24. nr2f1a ENSDARG00000052695 5037 2.23 - - - 0.721 0.702 - - - 0.807 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
25. zgc:158409 zgc:158409 21963 2.202 - - - 0.711 - - 0.731 0.760 -
26. rcn1 ENSDARG00000070006 8455 1.817 - 0.913 - - - - 0.904 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
27. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.792 - - - - 0.867 0.925 - - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
28. nrf1 ENSDARG00000000018 4683 1.776 - - - - - 0.907 0.869 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
29. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.776 - 0.915 - - - - - - 0.861 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
30. ston2 ENSDARG00000057452 2977 1.775 - - - - - 0.920 0.855 - - stonin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-137]
31. cplx4b ENSDARG00000059486 3192 1.772 - - - - - 0.903 0.869 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
32. cdca7a ENSDARG00000077620 9345 1.77 - 0.898 - - - - 0.872 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
33. zgc:110333 ENSDARG00000040628 3250 1.766 - 0.866 - - - 0.900 - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
34. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.763 - 0.863 - - - - 0.900 - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
35. cdc42se1 ENSDARG00000023724 3901 1.762 - 0.858 - - - 0.904 - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
36. zgc:101846 15202 1.752 - - - - - - 0.892 - 0.860 zgc:101846
37. chmp2bb ENSDARG00000002190 4629 1.751 - 0.831 - - - 0.920 - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
38. rab1a rab1a 14138 1.746 - - - - - 0.871 0.875 - -
39. GRB10 GRB10 1496 1.742 - - - - - 0.862 0.880 - -
40. pdcd10b ENSDARG00000012591 3395 1.741 - 0.896 - - - - 0.845 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
41. hoxa10b ENSDARG00000031337 3992 1.736 - 0.852 - - - - 0.884 - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
42. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.736 - 0.829 - - - - 0.907 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
43. kif11 ENSDARG00000010948 4973 1.736 - - - - - - 0.875 - 0.861 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
44. itga3b ENSDARG00000012824 1872 1.734 - - - - - 0.895 0.839 - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
45. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.733 - - - - - 0.901 - - 0.832 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
46. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.731 - - - - - - 0.909 - 0.822 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
47. styk1 1199 1.726 - - - - - 0.899 0.827 - - serine/threonine/tyrosine kinase 1
48. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 1.704 0.802 - - - - - 0.902 - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
49. ddx3 ddx3 4076 1.695 - 0.828 - - - - 0.867 - -
50. klf6a ENSDARG00000029072 3758 1.693 - 0.832 - - - - 0.861 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
51. clica clica 6206 1.685 - - - - - 0.843 0.842 - -
52. arid1aa ENSDARG00000101710 3644 1.685 - - - - - - 0.876 - 0.809 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
53. mob4 ENSDARG00000056085 17978 1.683 - - - - - 0.921 0.762 - - MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
54. rhoaa ENSDARG00000026845 6900 1.681 - - - - - - 0.910 - 0.771 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
55. her13 ENSDARG00000007097 2000 1.679 - - - - - 0.899 - - 0.780 hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
56. GATAD2B ENSDARG00000005834 3855 1.674 - 0.828 - - - - - - 0.846 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
57. APOD APOD 3404 1.673 - - - - - 0.892 0.781 - -
58. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.67 - - - - - 0.913 - - 0.757 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
59. bves ENSDARG00000058548 2291 1.668 - 0.827 - - - - 0.841 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
60. skp1 ENSDARG00000003151 8172 1.665 - - - - - - 0.904 - 0.761 S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
61. meis1 meis1 6937 1.661 0.732 - - - - 0.929 - - -
62. EIF4G1 EIF4G1 19676 1.661 - - - - - - 0.868 - 0.793
63. lsm4 ENSDARG00000023852 6083 1.66 - - - - - - 0.896 - 0.764 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
64. PRTG PRTG 4714 1.66 0.798 - - - - - 0.862 - -
65. sppl3 ENSDARG00000025220 1892 1.659 - - - - - - 0.881 - 0.778 signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
66. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.658 - - - - - - 0.864 - 0.794 caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
67. sf3b14 sf3b14 9434 1.656 - - - - - 0.917 - - 0.739
68. smc1al ENSDARG00000058203 8838 1.65 0.814 - - - - - - - 0.836 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
69. CPT1A CPT1A 4004 1.65 - 0.942 - - - - 0.708 - -
70. cux1a ENSDARG00000078459 3914 1.647 - - - - - 0.924 - - 0.723 cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
71. wu:fq41a10 wu:fq41a10 7009 1.644 - - 0.731 - - 0.913 - - -
72. gas1a ENSDARG00000077298 10891 1.641 - - - - - 0.899 0.742 - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
73. myf6 ENSDARG00000029830 1911 1.64 0.715 - - - - 0.925 - - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
74. eif3s6ip ENSDARG00000101082 18515 1.64 0.711 - - - - 0.929 - - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
75. dnajc15 ENSDARG00000038309 1274 1.639 0.722 - - - - 0.917 - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
76. cbx3a ENSDARG00000003860 4922 1.639 - - - - - 0.882 - - 0.757 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
77. sepw2a 8597 1.638 0.742 - - - - - 0.896 - - selenoprotein W, 2a
78. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.637 0.707 - - - - 0.930 - - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
79. khdrbs1a ENSDARG00000052856 53666 1.631 0.845 - - - 0.786 - - - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
80. prpf8 ENSDARG00000026180 7026 1.63 0.704 - - - - - 0.926 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
81. insm1b ENSDARG00000053301 2032 1.628 - - - - - - 0.850 - 0.778 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
82. ARHGAP22 ENSDARG00000076434 1406 1.628 - - - - - - 0.845 - 0.783 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
83. tex2 ENSDARG00000078186 2467 1.625 - 0.802 - - - - 0.823 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
84. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.621 - - - - 0.807 - - - 0.814 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
85. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.618 - - - 0.786 - - - - 0.832 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
86. CREBZF ENSDARG00000089787 4261 1.618 0.735 - - - - - - - 0.883 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
87. net1 ENSDARG00000032765 6738 1.614 - - - - - 0.762 0.852 - - neuroepithelial cell transforming 1 [Source:ZFIN;Acc:ZDB-GENE-041121-18]
88. xpo1b ENSDARG00000063229 2529 1.612 - - - - - - 0.860 - 0.752 exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
89. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 1.607 - - - - - 0.892 - - 0.715 eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
90. hnrnpa0a ENSDARG00000089302 45675 1.605 0.780 - - - - - 0.825 - - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
91. ino80c ENSDARG00000055719 1512 1.604 - - - - - - 0.837 - 0.767 INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
92. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.603 - - - 0.740 - - - - 0.863 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
93. stag1b ENSDARG00000062137 1814 1.602 - - - - - - 0.858 - 0.744 stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
94. alyref ENSDARG00000077732 25934 1.588 0.752 - 0.836 - - - - - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
95. setbp1 ENSDARG00000093799 4499 1.588 - - - - - - 0.864 - 0.724 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
96. pkp3 pkp3 9767 1.585 - 0.802 - - - - 0.783 - -
97. uck2a ENSDARG00000006074 1554 1.584 - 0.822 - - - - - - 0.762 uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
98. CORO1C CORO1C 5554 1.58 0.709 - - - - - 0.871 - -
99. ddx5 ENSDARG00000038068 35302 1.578 - - 0.713 - - - 0.865 - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
100. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.576 - 0.858 - - - - - - 0.718 eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]

There are 1416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA