Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for whsc1l1

Gene Name Gene ID Reads Annotation
whsc1l1 8544 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2










Genes with expression patterns similar to whsc1l1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. whsc1l1 8544 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
2. FP016176.1 FP016176.1 7030 3.994 0.755 - 0.822 - - 0.809 0.800 - 0.808
3. tmem35 ENSDARG00000052567 5685 3.986 0.713 - - - - 0.829 0.730 0.896 0.818 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
4. smarca4 smarca4 9726 3.955 - 0.864 - 0.774 0.709 0.834 0.774 - -
5. ddx39ab ENSDARG00000015111 11619 3.844 0.708 - - - - 0.737 0.813 0.712 0.874 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
6. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.819 - - - 0.748 - 0.783 0.741 0.732 0.815 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
7. top2a ENSDARG00000024488 4273 3.324 - 0.992 - 0.743 - - 0.788 - 0.801 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
8. nkain1 ENSDARG00000006859 1961 3.291 - 0.987 - - - 0.793 0.798 - 0.713 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
9. uba1 ENSDARG00000037559 11579 3.264 - - 0.874 - 0.730 0.831 0.829 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
10. hmgb3a ENSDARG00000056725 15668 3.239 0.709 - - - - 0.783 0.817 - 0.930 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
11. fam60al 2846 3.238 - - - - 0.748 - 0.838 0.847 0.805 family with sequence similarity 60, member A, like
12. hnrnpub ENSDARG00000004735 16496 3.223 - - - 0.766 - - 0.798 0.763 0.896 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
13. arnt2 ENSDARG00000103697 5731 3.17 - - - - - 0.821 0.748 0.763 0.838 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
14. lypla2 ENSDARG00000053656 8971 3.151 - - - - 0.730 0.785 0.814 - 0.822 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
15. nova2 ENSDARG00000017673 7685 3.141 - - - 0.723 - 0.810 0.736 - 0.872 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. carm1 ENSDARG00000018698 5599 3.114 - - - - 0.738 0.759 0.765 - 0.852 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
17. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 3.075 0.782 - - 0.758 - 0.782 0.753 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
18. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.074 - - - 0.792 - 0.756 0.764 - 0.762 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
19. AGO1 ENSDARG00000092644 4521 3.062 - - - - - 0.826 0.813 0.714 0.709 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
20. zswim5 ENSDARG00000055900 4243 3.051 - - - - - 0.706 0.743 0.763 0.839 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
21. C8H1orf106 C8H1orf106 2690 3.047 - - - - 0.762 0.837 0.712 - 0.736
22. cspg5a ENSDARG00000069981 1699 3.045 - - - 0.749 - 0.814 0.723 - 0.759 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
23. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.993 - - - - - 0.715 0.729 0.720 0.829 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
24. stmn1a ENSDARG00000004169 21169 2.985 0.763 - - - - - 0.717 0.778 0.727 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
25. fzd3a ENSDARG00000021664 1958 2.981 - - - 0.708 - 0.739 0.767 - 0.767 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
26. mllt11 ENSDARG00000071026 2518 2.981 - - - - - 0.711 0.726 0.808 0.736 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
27. prmt1 ENSDARG00000010246 11311 2.964 0.748 - - - - 0.766 0.744 0.706 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
28. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.959 - - - - - 0.783 0.742 0.709 0.725 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
29. cd99l2 ENSDARG00000056722 5036 2.949 0.724 - - - 0.705 - 0.764 - 0.756 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
30. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 2.948 - - - 0.758 0.731 0.708 - - 0.751 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
31. vezf1a ENSDARG00000008247 1449 2.889 - - - - - 0.702 0.705 0.709 0.773 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
32. smarca5 ENSDARG00000052348 15433 2.629 - - - - - 0.839 0.905 - 0.885 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
33. hmgb2b ENSDARG00000053990 11519 2.581 - - 0.871 - - - 0.857 - 0.853 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
34. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.573 - 0.986 - 0.766 - - - - 0.821 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
35. smarce1 ENSDARG00000016871 9628 2.563 - 0.981 - - - 0.828 0.754 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
36. atp2b4 5891 2.556 - 0.924 - - - 0.819 0.813 - - ATPase, Ca++ transporting, plasma membrane 4
37. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.515 - - - - - - 0.862 0.801 0.852 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
38. rbb4 rbb4 15541 2.502 - - - - - 0.791 0.815 - 0.896
39. pcdh19 ENSDARG00000034344 2378 2.497 - - - - - 0.852 0.801 - 0.844 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
40. smc1al ENSDARG00000058203 8838 2.484 - - - - - 0.813 0.770 - 0.901 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
41. max ENSDARG00000024844 6035 2.465 - 0.972 - - - - 0.726 - 0.767 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
42. smarcd1 ENSDARG00000019004 6028 2.458 - - - - - 0.776 0.805 - 0.877 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
43. rrm1 ENSDARG00000014017 7296 2.452 - - - 0.794 - - 0.836 - 0.822 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
44. gfap ENSDARG00000025301 5584 2.449 - 0.988 - - - 0.736 0.725 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
45. cks1b ENSDARG00000007971 2739 2.449 - 0.986 - - - - 0.749 - 0.714 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
46. tle2 5014 2.447 0.743 - - - - - 0.886 0.818 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
47. sin3b ENSDARG00000062472 2025 2.442 - - - - - 0.773 0.894 - 0.775 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
48. ssbp4 ENSDARG00000056483 10196 2.439 - - - - - 0.916 0.789 0.734 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
49. setbp1 ENSDARG00000093799 4499 2.431 - 0.987 - 0.720 - 0.724 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
50. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.42 - - - - - - 0.791 0.815 0.814 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
51. dpysl3 ENSDARG00000002587 4381 2.417 - - - - - 0.842 0.750 - 0.825 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
52. srsf11 ENSDARG00000098574 12801 2.416 - - 0.733 - - - 0.799 - 0.884 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
53. aspm ENSDARG00000103754 5708 2.414 0.844 - - 0.779 - - 0.791 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
54. hnrnpm ENSDARG00000061735 19428 2.414 - - - 0.708 - - - 0.815 0.891 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
55. lfng ENSDARG00000037879 11783 2.412 - - - 0.728 - 0.834 - - 0.850 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
56. top1l ENSDARG00000070545 40529 2.411 - - - 0.710 - - 0.856 0.845 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
57. srsf6b ENSDARG00000016783 9926 2.407 - 0.975 - - 0.728 - 0.704 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
58. chd7 ENSDARG00000075211 12085 2.401 - - 0.763 - - 0.832 0.806 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
59. hnrpl 6412 2.394 - - - - - 0.805 0.710 - 0.879 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
60. marcksl1b ENSDARG00000035715 37390 2.386 0.752 - - 0.789 - - - - 0.845 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
61. GATAD2B ENSDARG00000005834 3855 2.382 - - - - - 0.740 0.829 - 0.813 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
62. marcksa ENSDARG00000004049 2518 2.381 - - - - - 0.857 0.708 - 0.816 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
63. khsrp ENSDARG00000026489 15738 2.378 - - - - - 0.741 0.800 - 0.837 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
64. sumo3a ENSDARG00000028119 13447 2.377 0.762 - - - - - 0.724 - 0.891 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
65. hmgb1b ENSDARG00000030479 10398 2.374 - - - - - 0.746 0.821 0.807 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
66. znf865 ENSDARG00000036698 15532 2.371 - - - - - 0.776 0.821 - 0.774 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
67. snrpd3l ENSDARG00000076283 7655 2.361 - - - - - 0.706 0.872 - 0.783 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
68. CR936437.1 CR936437.1 6465 2.36 0.759 - - - - - - 0.724 0.877
69. wu:fb17g07 wu:fb17g07 10567 2.358 - - - - - 0.724 0.791 - 0.843
70. clstn1 ENSDARG00000031720 5286 2.357 - - - - - 0.813 0.726 0.818 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
71. TAF15 ENSDARG00000070019 5102 2.356 - - - - 0.805 0.737 - - 0.814 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
72. si:dkeyp-113d7.10 ENSDARG00000092359 1585 2.355 - - - - - 0.847 0.724 - 0.784 si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
73. CABZ01111990.1 CABZ01111990.1 4374 2.351 - - - - - 0.794 0.776 - 0.781
74. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.35 - - - - - 0.805 0.753 - 0.792 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
75. si:dkey-19e4.5 ENSDARG00000089886 2562 2.35 0.798 - - - - 0.701 0.851 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
76. creb1a ENSDARG00000053586 5068 2.349 0.739 - - - - 0.795 - - 0.815 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
77. slbp ENSDARG00000100558 3405 2.346 - - - - - - 0.781 0.854 0.711 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
78. pou3f2a ENSDARG00000070220 817 2.342 - - - - - 0.827 0.740 - 0.775 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
79. nrarpb ENSDARG00000018958 6225 2.333 - - - - - - 0.742 0.824 0.767 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
80. tox ENSDARG00000032317 9126 2.332 - - - - - - 0.737 0.806 0.789 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
81. dpysl5a ENSDARG00000011141 1827 2.327 - - - - - - 0.738 0.797 0.792 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
82. mxd3 ENSDARG00000098350 3040 2.325 - - - - 0.755 - 0.794 - 0.776 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
83. CABZ01028287.1 CABZ01028287.1 626 2.325 - - - - - 0.808 - 0.760 0.757
84. uhrf1 ENSDARG00000103409 3282 2.324 0.794 - - - - - - 0.803 0.727 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
85. MKI67 ENSDARG00000091150 11038 2.321 - - - 0.738 - - 0.739 - 0.844 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
86. pfn2l ENSDARG00000012682 21690 2.316 - - - 0.760 - - 0.820 0.736 - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
87. inab ENSDARG00000053248 3239 2.312 - - - - - 0.813 - 0.746 0.753 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
88. tead1a ENSDARG00000028159 3574 2.312 - - 0.784 0.793 - 0.735 - - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
89. tuba1c ENSDARG00000055216 8384 2.309 - - - - - 0.735 0.720 - 0.854 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
90. kif22 ENSDARG00000102624 3694 2.305 - - - - - 0.779 0.750 - 0.776 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
91. stmn1b ENSDARG00000033655 9491 2.304 - - - - - - 0.738 0.806 0.760 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
92. PSIP1 PSIP1 5252 2.296 0.739 - 0.833 - - - - - 0.724
93. pou3f3a ENSDARG00000042032 2835 2.296 - - - - - 0.792 0.748 - 0.756 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
94. nhlh2 ENSDARG00000025495 1860 2.295 - - - - - 0.804 0.709 - 0.782 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
95. sh2d3ca ENSDARG00000028099 1037 2.294 - - - 0.701 - - 0.833 - 0.760 SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
96. elof1 ENSDARG00000099453 6176 2.288 - - - 0.721 - - 0.752 0.815 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
97. rbm25 rbm25 3629 2.286 - - - - - 0.824 0.713 - 0.749
98. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.283 - - - - 0.728 - 0.712 - 0.843 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
99. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.283 - - - - - 0.718 0.834 - 0.731 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
100. foxk2 ENSDARG00000030583 2982 2.283 - - - - - 0.786 0.790 - 0.707 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]

There are 1724 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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