Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vti1b

Gene Name Gene ID Reads Annotation
vti1b ENSDARG00000039270 295 vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]










Genes with expression patterns similar to vti1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vti1b ENSDARG00000039270 295 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
2. depdc7 232 2.359 0.778 - - 0.881 - - 0.700 - - DEP domain containing 7, transcript variant X1
3. si:ch1073-155h21.1 ENSDARG00000007582 137 1.856 0.955 - - 0.901 - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
4. pnpla8 ENSDARG00000078745 326 1.768 0.865 - - 0.903 - - - - - patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]
5. FRMD4B FRMD4B 359 1.767 0.844 - - 0.923 - - - - -
6. MRAS ENSDARG00000075285 260 1.766 - - - 0.946 - - 0.820 - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
7. ndufaf6 ENSDARG00000053652 351 1.696 0.777 - - 0.919 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-100112-1]
8. slc9a8 ENSDARG00000020699 206 1.632 0.857 - - - - - 0.775 - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
9. vrk3 ENSDARG00000036056 424 1.616 - 0.775 - 0.841 - - - - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
10. si:ch211-117n7.8 si:ch211-117n7.8 83 1.609 0.751 - - - - - 0.858 - -
11. si:dkeyp-52c3.2 ENSDARG00000070516 92 1.588 0.776 0.812 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
12. slc16a6b ENSDARG00000060246 451 1.586 - 0.720 - 0.866 - - - - - solute carrier family 16, member 6b [Source:ZFIN;Acc:ZDB-GENE-110208-3]
13. akap9 ENSDARG00000079610 654 1.582 - - - 0.881 - - 0.701 - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
14. rbm18 ENSDARG00000044255, ENSDARG00000111311 589 1.572 0.756 0.816 - - - - - - - RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]
15. si:ch211-67e16.11 ENSDARG00000095580 635 1.567 0.708 - - - - - 0.859 - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
16. MDFIC ENSDARG00000074223 781 1.559 - 0.771 - 0.788 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
17. dre-mir-222a ENSDARG00000090347 131 1.559 - 0.794 - - - - 0.765 - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
18. CNNM2 CNNM2 225 1.554 0.784 0.770 - - - - - - -
19. rnpc3 ENSDARG00000011247 778 1.537 - 0.776 - - - - 0.761 - - RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
20. si:dkey-52k20.13 si:dkey-52k20.13 428 1.536 - 0.809 - - - - 0.727 - -
21. GFRAL ENSDARG00000089709 167 1.528 - 0.823 - - - 0.705 - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
22. cux1b ENSDARG00000043134 641 1.512 - 0.788 - 0.724 - - - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
23. adamts6 ENSDARG00000041982 320 1.497 - 0.755 - - - - 0.742 - - ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
24. HYAL1 ENSDARG00000059916 134 1.488 - 0.742 - - - - 0.746 - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
25. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.481 - 0.775 - - - - 0.706 - - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
26. hectd3 ENSDARG00000038905 1170 1.476 - 0.739 - 0.737 - - - - - HECT domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-031118-179]
27. tango6 ENSDARG00000034001 203 1.474 0.730 0.744 - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
28. rbm45 ENSDARG00000063731 504 1.471 - 0.765 - - - 0.706 - - - RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
29. agpat6 agpat6 587 1.464 - - - - - 0.718 0.746 - -
30. gabpb2a ENSDARG00000007943 1570 1.46 - 0.754 - 0.706 - - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
31. gnb1a ENSDARG00000090454 481 1.437 0.719 0.718 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
32. zgc:163121 ENSDARG00000055370 110 1.412 - - - - 0.712 0.700 - - - zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
33. si:dkey-15h14.4 si:dkey-15h14.4 118 0.985 - - - 0.985 - - - - -
34. TRPM6 ENSDARG00000103454 15 0.981 - - - 0.981 - - - - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
35. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 0.981 - - - 0.981 - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
36. zgc:92880 zgc:92880 56 0.981 - - - 0.981 - - - - -
37. BX323449.2 BX323449.2 50 0.981 - - - 0.981 - - - - -
38. strn4 ENSDARG00000102902 24 0.981 - - - 0.981 - - - - - striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
39. SLC39A8 ENSDARG00000056757 52 0.98 - - - 0.980 - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
40. zgc:162180 zgc:162180 31 0.979 - - - 0.979 - - - - -
41. fam151a ENSDARG00000058218 40 0.976 - - - 0.976 - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
42. zgc:153345 ENSDARG00000055622 29 0.973 - - - 0.973 - - - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
43. fer ENSDARG00000012196 83 0.972 - - - 0.972 - - - - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
44. CABZ01067743.1 CABZ01067743.1 48 0.97 - - - 0.970 - - - - -
45. gulp1b ENSDARG00000057833 382 0.97 - - - 0.970 - - - - - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
46. dynll2b ENSDARG00000005172 935 0.97 - 0.970 - - - - - - - dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132]
47. fkbp10a ENSDARG00000099183 314 0.969 - - - 0.969 - - - - - FK506 binding protein 10a [Source:ZFIN;Acc:ZDB-GENE-100921-75]
48. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.966 - - - 0.966 - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
49. ZBTB22 ZBTB22 1053 0.964 - - - 0.964 - - - - -
50. LRFN2 118 0.964 - - - 0.964 - - - - - leucine rich repeat and fibronectin type III domain containing 2
51. MAP3K6 MAP3K6 181 0.963 - - - 0.963 - - - - -
52. si:dkey-47k16.4 ENSDARG00000113005 87 0.962 - - - - - - 0.962 - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
53. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.962 - - - 0.962 - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
54. myo1f ENSDARG00000078734 100 0.962 - - - 0.962 - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
55. zgc:153615 ENSDARG00000038981 105 0.961 - - - 0.961 - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
56. mettl20 56 0.959 - - - 0.959 - - - - - methyltransferase like 20
57. GAB3 GAB3 72 0.955 - - - 0.955 - - - - -
58. gpr137 ENSDARG00000037244 801 0.95 - - - 0.950 - - - - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
59. si:dkey-263m6.1 si:dkey-263m6.1 140 0.95 - - - 0.950 - - - - -
60. pc pc 116 0.949 - - - - - - 0.949 - -
61. alkbh2 ENSDARG00000059856, ENSDARG00000115064 97 0.949 - - - 0.949 - - - - - alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-060526-327]
62. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 0.949 - - - 0.949 - - - - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
63. pdk4 ENSDARG00000054848 258 0.947 - - - 0.947 - - - - - pyruvate dehydrogenase kinase, isozyme 4 [Source:ZFIN;Acc:ZDB-GENE-060503-754]
64. DUSP26 ENSDARG00000103752 404 0.946 - - - 0.946 - - - - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
65. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 0.944 - - - 0.944 - - - - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
66. PLEKHS1 ENSDARG00000079227 7 0.942 - - - - - - 0.942 - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
67. ANKRD13D ENSDARG00000098140 88 0.941 - - - 0.941 - - - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
68. ppapdc2 ppapdc2 67 0.94 - - - - - - 0.940 - -
69. CR376785.2 CR376785.2 175 0.938 - - - 0.938 - - - - -
70. steap4 ENSDARG00000055901 61 0.938 - - - - - - 0.938 - - STEAP family member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-244]
71. fbxo32 ENSDARG00000040277 93 0.938 0.938 - - - - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
72. dtnbb ENSDARG00000013020 280 0.937 - - - 0.937 - - - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
73. MTERFD2 MTERFD2 140 0.936 - - - 0.936 - - - - -
74. myl2b ENSDARG00000053424 226 0.936 - - - - - - 0.936 - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
75. TJP1 TJP1 153 0.934 0.934 - - - - - - - -
76. pif1 ENSDARG00000020289 216 0.934 - - - 0.934 - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
77. CABZ01020188.1 CABZ01020188.1 61 0.934 - - - 0.934 - - - - -
78. zgc:171901 ENSDARG00000074365 129 0.931 - - - - - - 0.931 - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
79. hoxd13a ENSDARG00000059256 1190 0.931 - - - - - - 0.931 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
80. igsf21a ENSDARG00000031049 165 0.931 - - - 0.931 - - - - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
81. si:ch211-213a13.1 ENSDARG00000090600 381 0.93 - - - 0.930 - - - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
82. si:dkey-32e23.4 ENSDARG00000063159 28 0.929 - - - - - - 0.929 - - si:dkey-32e23.4 [Source:ZFIN;Acc:ZDB-GENE-081105-41]
83. CABZ01087670.1 CABZ01087670.1 411 0.929 - 0.929 - - - - - - -
84. zp2.1 ENSDARG00000086352 41 0.928 - - - - - - 0.928 - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
85. si:ch73-57f22.2 ENSDARG00000087453 28 0.928 - - - - - - 0.928 - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
86. CU019624.1 ENSDARG00000103960 273 0.927 - - - 0.927 - - - - -
87. TTC37 ENSDARG00000074314 356 0.926 - - - - - - 0.926 - - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
88. aatka ENSDARG00000078222 218 0.926 0.926 - - - - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
89. rab4a ENSDARG00000019144 192 0.925 - - - 0.925 - - - - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
90. si:dkey-17e16.8 284 0.924 - - - 0.924 - - - - - si:dkey-17e16.8
91. matk ENSDARG00000074670 225 0.922 - - - 0.922 - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
92. abhd3 ENSDARG00000018809 168 0.922 - - - 0.922 - - - - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
93. KBTBD13_1 KBTBD13_1 116 0.922 - - - 0.922 - - - - -
94. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.922 - - - 0.922 - - - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
95. CABZ01102038.1 ENSDARG00000116210 132 0.922 - - - 0.922 - - - - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
96. hoxc13a ENSDARG00000070353 4815 0.921 - - - - - - 0.921 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
97. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 0.921 - - - 0.921 - - - - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
98. cyth3 cyth3 120 0.921 - - - - - - 0.921 - -
99. hsd17b14 ENSDARG00000054842 1394 0.921 - - - 0.921 - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
100. si:dkey-46m10.3 si:dkey-46m10.3 246 0.92 - 0.920 - - - - - - -

There are 1082 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA