Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vti1a

Gene Name Gene ID Reads Annotation
vti1a ENSDARG00000045065 7 vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]










Genes with expression patterns similar to vti1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vti1a ENSDARG00000045065 7 5 - 1.000 1.000 1.000 - - - 1.000 1.000 vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
2. tmprss3a ENSDARG00000053315 5 2 - 1.000 1.000 - - - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
3. RIMS2 RIMS2 2 2 - 1.000 - 1.000 - - - - -
4. BX465848.2 ENSDARG00000116920 6 2 - 1.000 - 1.000 - - - - -
5. PEG3_13 PEG3_13 5 2 - 1.000 - 1.000 - - - - -
6. vwf ENSDARG00000077231 5 2 - 1.000 - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
7. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 2 - 1.000 - 1.000 - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
8. si:dkeyp-82a1.8 ENSDARG00000095539 6 2 - - 1.000 1.000 - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
9. TRIM35 TRIM35 100 1.991 - 1.000 0.991 - - - - - -
10. CST7 CST7 22 1.977 - 1.000 - - - - - - 0.977
11. wu:fb63c12 26 1.959 - 1.000 0.959 - - - - - - wu:fb63c12
12. SLCO5A1 SLCO5A1 6 1.947 - 1.000 - - - - - - 0.947
13. TAF2_1 TAF2_1 222 1.898 - 1.000 0.898 - - - - - -
14. dvr1 dvr1 24 1.837 - 1.000 0.837 - - - - - -
15. cyp27a1.4 ENSDARG00000055159 47 1.795 - 1.000 0.795 - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
16. si:dkey-281a10.1 si:dkey-281a10.1 2 1.775 - 1.000 - - - - - 0.775 -
17. si:ch211-22d5.2 ENSDARG00000079031 3 1.752 - - - - - - - 0.775 0.977 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
18. DOCK1 ENSDARG00000099093 21 1.749 - - 0.965 - - - - - 0.784 dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
19. slco1f3 ENSDARG00000105691 6 1.705 - 1.000 - - - - - 0.705 - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
20. NETO2 121 1.702 - 1.000 0.702 - - - - - - neuropilin and tolloid like 2, transcript variant X2
21. ponzr10 ENSDARG00000087764 3 1.582 - - - - - - - 0.775 0.807 plac8 onzin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-081107-68]
22. CABZ01054405.2 CABZ01054405.2 46 1 - 1.000 - - - - - - -
23. TFR2 ENSDARG00000103727 1 1 - 1.000 - - - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
24. KCNAB3 KCNAB3 134 1 - 1.000 - - - - - - -
25. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
26. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - 1.000 - - - - - - -
27. dhrs13l1 ENSDARG00000098746 102 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
28. si:ch1073-76a20.1 si:ch1073-76a20.1 0 1 - 1.000 - - - - - - -
29. ptx3b ENSDARG00000079515 10 1 - 1.000 - - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
30. zgc:173624 ENSDARG00000096141 3 1 - - 1.000 - - - - - - zgc:173624 [Source:ZFIN;Acc:ZDB-GENE-071004-60]
31. dclk3 ENSDARG00000078997 2 1 - 1.000 - - - - - - - doublecortin-like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-224]
32. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
33. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 - 1.000 - - - - - - -
34. CABZ01035647.1 CABZ01035647.1 5 1 - - - 1.000 - - - - -
35. TTC40 TTC40 1 1 - 1.000 - - - - - - -
36. ankrd1b ENSDARG00000076192 204 1 - 1.000 - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
37. CELA1_1 CELA1_1 104 1 - - - 1.000 - - - - -
38. U6_21 U6_21 0 1 - - - 1.000 - - - - -
39. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - 1.000 - - - - - - -
40. pou3f2a ENSDARG00000070220 817 1 - 1.000 - - - - - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
41. TRMT12 ENSDARG00000060338 58 1 - 1.000 - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
42. TRIM35_7 TRIM35_7 22 1 - 1.000 - - - - - - -
43. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
44. si:ch211-207c6.7 si:ch211-207c6.7 8 1 - 1.000 - - - - - - -
45. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -
46. AL935272.2 AL935272.2 37 1 - 1.000 - - - - - - -
47. KIF9 ENSDARG00000031693 11 1 - 1.000 - - - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
48. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
49. zgc:113343 ENSDARG00000103196 2 1 - 1.000 - - - - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
50. crygm2f ENSDARG00000078134, ENSDARG00000112285 2 1 - - - 1.000 - - - - - crystallin, gamma M2f [Source:ZFIN;Acc:ZDB-GENE-080220-17]
51. hs6st3b ENSDARG00000069500 5 1 - 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
52. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - 1.000 - - - - - - -
53. si:dkeyp-101e12.1 ENSDARG00000089794 0 1 - - - 1.000 - - - - - si:dkeyp-101e12.1 [Source:ZFIN;Acc:ZDB-GENE-091113-32]
54. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
55. foxg1b ENSDARG00000032705 354 1 - 1.000 - - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
56. DLGAP2 DLGAP2 36 1 - 1.000 - - - - - - -
57. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
58. pcdh2ab7 7 1 - - - 1.000 - - - - - protocadherin 2 alpha b 7
59. KLHL29 ENSDARG00000087688 1 1 - 1.000 - - - - - - - kelch-like family member 29 [Source:ZFIN;Acc:ZDB-GENE-121114-1]
60. si:dkey-207j16.8 si:dkey-207j16.8 0 1 - 1.000 - - - - - - -
61. nr5a1b ENSDARG00000023362 54 1 - 1.000 - - - - - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
62. abhd10a ENSDARG00000076435 3 1 - - - 1.000 - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
63. si:dkey-72l17.1 si:dkey-72l17.1 0 1 - - - 1.000 - - - - -
64. pcsk7 ENSDARG00000069968 5 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
65. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
66. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
67. SNORA55 SNORA55 0 1 - - - 1.000 - - - - -
68. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - 1.000 - - - - - - -
69. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - 1.000 - - - - - - -
70. PDE9A_1 PDE9A_1 1 1 - 1.000 - - - - - - -
71. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
72. slc7a10a ENSDARG00000008100 178 1 - 1.000 - - - - - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
73. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
74. CR628365.1 ENSDARG00000097736 29 1 - 1.000 - - - - - - -
75. znf804b ENSDARG00000103396 11 1 - 1.000 - - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
76. si:ch211-145h19.2 7 1 - - - 1.000 - - - - - si:ch211-145h19.2
77. dzip1l ENSDARG00000074265 61 1 - 1.000 - - - - - - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
78. CR936337.1 CR936337.1 38 1 - 1.000 - - - - - - -
79. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
80. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - 1.000 - - - - - - -
81. si:dkey-11e23.9 ENSDARG00000095586 114 1 - - 1.000 - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
82. plekho1b ENSDARG00000077499 21 1 - 1.000 - - - - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
83. nab1a ENSDARG00000042940 26 1 - 1.000 - - - - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
84. CU896645.1 CU896645.1 10 1 - 1.000 - - - - - - -
85. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
86. osbpl6 ENSDARG00000063730 2 1 - 1.000 - - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
87. VDAC3 ENSDARG00000003695 34 1 - 1.000 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
88. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - 1.000 - - - - - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
89. LOXL2 LOXL2 2 1 - 1.000 - - - - - - -
90. ugt5g2 ENSDARG00000043901, ENSDARG00000112752 1 1 - - - 1.000 - - - - - UDP glucuronosyltransferase 5 family, polypeptide G2 [Source:ZFIN;Acc:ZDB-GENE-081028-66]
91. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - 1.000 - - - - - - -
92. C9H17orf105 C9H17orf105 29 1 - 1.000 - - - - - - -
93. pole2 ENSDARG00000100028 42 1 - 1.000 - - - - - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
94. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
95. ccna2 ENSDARG00000011094 4 1 - 1.000 - - - - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
96. CABZ01069020.1 ENSDARG00000105806 19 1 - 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
97. si:zfos-44h1.1 si:zfos-44h1.1 1 1 - - - 1.000 - - - - -
98. svopa ENSDARG00000056833 14 1 - 1.000 - - - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
99. edn3b ENSDARG00000086669 8 1 - - - 1.000 - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
100. PRODH PRODH 13 1 - 1.000 - - - - - - -

There are 667 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA