Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vstm4b

Gene Name Gene ID Reads Annotation
vstm4b ENSDARG00000053186 369 V-set and transmembrane domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-080303-17]










Genes with expression patterns similar to vstm4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vstm4b ENSDARG00000053186 369 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 V-set and transmembrane domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-080303-17]
2. TMEM102 ENSDARG00000087162 312 1.548 - 0.756 - - - - 0.792 - - transmembrane protein 102 [Source:HGNC Symbol;Acc:HGNC:26722]
3. CU694374.3 CU694374.3 28 1.514 - - - - - 0.777 0.737 - -
4. CR450814.3 CR450814.3 608 0.905 - 0.905 - - - - - - -
5. jph1a ENSDARG00000058603 2852 0.895 - 0.895 - - - - - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
6. CU929240.1 ENSDARG00000101648 1866 0.893 - 0.893 - - - - - - -
7. nrros ENSDARG00000071491, ENSDARG00000112102 64 0.892 - - - - - - 0.892 - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
8. MAST3 MAST3 540 0.89 - 0.890 - - - - - - -
9. si:dkey-192g7.3 ENSDARG00000094012 105 0.889 - - - - - - 0.889 - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
10. sars2 ENSDARG00000102736 206 0.884 - 0.884 - - - - - - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
11. farsa ENSDARG00000098825 2813 0.881 - 0.881 - - - - - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
12. tbce ENSDARG00000099921 458 0.88 - 0.880 - - - - - - - tubulin folding cofactor E [Source:ZFIN;Acc:ZDB-GENE-051030-120]
13. rnf41l ENSDARG00000073918 329 0.862 - 0.862 - - - - - - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
14. C20H1orf112 C20H1orf112 316 0.86 - 0.860 - - - - - - -
15. sema4ab ENSDARG00000062352 409 0.858 - - - - - 0.858 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
16. slc12a7a ENSDARG00000073756 170 0.858 - - - - - - 0.858 - - solute carrier family 12 (potassium/chloride transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-070912-696]
17. ddx49 ENSDARG00000012899 1604 0.856 - 0.856 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
18. ptpn2a ENSDARG00000016481 493 0.855 - - - - - - 0.855 - - protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
19. has2 ENSDARG00000036987 349 0.851 - 0.851 - - - - - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
20. cdk6 ENSDARG00000070228 1778 0.851 - 0.851 - - - - - - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
21. ENSDARG00000092971 ENSDARG00000092971 563 0.849 0.849 - - - - - - - -
22. IGFN1 IGFN1 5030 0.848 - 0.848 - - - - - - -
23. pdss1 ENSDARG00000017910 1290 0.846 - 0.846 - - - - - - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
24. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.846 - 0.846 - - - - - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
25. tyr ENSDARG00000039077 568 0.844 - - - - - 0.844 - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
26. txlnbb ENSDARG00000076241 6396 0.842 - 0.842 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
27. si:dkey-246i21.1 197 0.841 - 0.841 - - - - - - - si:dkey-246i21.1, transcript variant X2
28. TRIM63 TRIM63 1600 0.839 - 0.839 - - - - - - -
29. cd276 ENSDARG00000003061 2798 0.838 - - - - - 0.838 - - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
30. dclk2 dclk2 719 0.836 - 0.836 - - - - - - -
31. pter ENSDARG00000063375 217 0.835 - 0.835 - - - - - - - phosphotriesterase related [Source:ZFIN;Acc:ZDB-GENE-060825-190]
32. ATP5J_2 ATP5J_2 2381 0.835 - 0.835 - - - - - - -
33. CABZ01044943.1 CABZ01044943.1 309 0.834 - 0.834 - - - - - - -
34. TMPO TMPO 3264 0.834 - 0.834 - - - - - - -
35. kcnj2 kcnj2 326 0.834 - 0.834 - - - - - - -
36. ttc21b ENSDARG00000012368 229 0.833 - 0.833 - - - - - - - tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
37. si:ch73-103b9.2 ENSDARG00000092489 89 0.832 - - - - - - 0.832 - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
38. hsd17b10 ENSDARG00000017781 1793 0.832 - 0.832 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
39. agk ENSDARG00000009837, ENSDARG00000113514 811 0.832 - 0.832 - - - - - - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
40. sema6a ENSDARG00000102165 1401 0.831 - 0.831 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
41. tmem176 ENSDARG00000078659 611 0.83 - - - - - 0.830 - - - transmembrane protein 176 [Source:ZFIN;Acc:ZDB-GENE-080902-2]
42. PTPLA PTPLA 4044 0.829 - 0.829 - - - - - - -
43. obsl1b ENSDARG00000077388 2511 0.829 - 0.829 - - - - - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
44. mir133b_1 671 0.829 - 0.829 - - - - - - - microRNA 133b
45. sh3bgr ENSDARG00000021633 3498 0.828 - 0.828 - - - - - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
46. CBFA2T3 ENSDARG00000079012 6799 0.826 - 0.826 - - - - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
47. gypc ENSDARG00000041546 1487 0.826 - 0.826 - - - - - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
48. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.825 - 0.825 - - - - - - -
49. eif3eb ENSDARG00000002549, ENSDARG00000113466 223 0.822 - 0.822 - - - - - - - eukaryotic translation initiation factor 3, subunit E, b [Source:ZFIN;Acc:ZDB-GENE-050208-283]
50. chrnd ENSDARG00000019342 2728 0.819 - 0.819 - - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
51. ssbp1 ENSDARG00000039350 809 0.819 - 0.819 - - - - - - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
52. FBXL7 ENSDARG00000062251 179 0.818 - - - - - 0.818 - - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
53. ICT1 356 0.815 - 0.815 - - - - - - - immature colon carcinoma transcript 1
54. eya4 ENSDARG00000012397, ENSDARG00000117039 887 0.815 - 0.815 - - - - - - - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
55. foxc1b ENSDARG00000055398 1499 0.815 - 0.815 - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
56. tmem70 ENSDARG00000078773 1290 0.813 - 0.813 - - - - - - - transmembrane protein 70 [Source:ZFIN;Acc:ZDB-GENE-070912-593]
57. ezh1 ENSDARG00000037894 294 0.813 - - - - - - 0.813 - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
58. zdhhc5a ENSDARG00000016263 625 0.811 - 0.811 - - - - - - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
59. setd3 ENSDARG00000016513 1507 0.811 - 0.811 - - - - - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
60. foxa1 ENSDARG00000102138 1797 0.811 - 0.811 - - - - - - - forkhead box A1 [Source:ZFIN;Acc:ZDB-GENE-990415-78]
61. twist2 ENSDARG00000078266 499 0.81 - 0.810 - - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
62. GEMIN6 ENSDARG00000105394 130 0.81 - - - - - - 0.810 - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
63. shank3b ENSDARG00000063054 148 0.81 - - - - - - 0.810 - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
64. AOC3 AOC3 590 0.809 - 0.809 - - - - - - -
65. pdlim7 ENSDARG00000103854 465 0.809 - 0.809 - - - - - - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
66. zgc:66479 ENSDARG00000008732 3347 0.809 - 0.809 - - - - - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
67. C25H12orf4 C25H12orf4 317 0.808 - - - - - 0.808 - - -
68. wdr36 ENSDARG00000004774 887 0.808 - 0.808 - - - - - - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
69. vbp1 ENSDARG00000030241 10619 0.808 - 0.808 - - - - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
70. limch1a ENSDARG00000074275 2981 0.808 - 0.808 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
71. rassf8b ENSDARG00000045485 1568 0.808 - 0.808 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
72. KLHL2 ENSDARG00000061786 204 0.807 - 0.807 - - - - - - - kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-090312-193]
73. sf3b5 ENSDARG00000016855 4015 0.806 - 0.806 - - - - - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
74. zgc:193681 187 0.806 - - - - - - 0.806 - - zgc:193681, transcript variant X1
75. ctsk ENSDARG00000040251 1111 0.805 - - - - - 0.805 - - - cathepsin K [Source:ZFIN;Acc:ZDB-GENE-001205-4]
76. igdcc4 ENSDARG00000076919 1303 0.805 - 0.805 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
77. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.803 - 0.803 - - - - - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
78. RNF169 ENSDARG00000042825 727 0.803 - 0.803 - - - - - - - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
79. PHB2 PHB2 3755 0.802 - 0.802 - - - - - - -
80. fam63b 484 0.802 - - - - - 0.802 - - - family with sequence similarity 63, member B
81. mob2b ENSDARG00000012005 395 0.801 - 0.801 - - - - - - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
82. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 0.801 - - - - - 0.801 - - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
83. sorbs1 ENSDARG00000103435 2297 0.8 - 0.800 - - - - - - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
84. CABZ01080370.1 CABZ01080370.1 58 0.8 - 0.800 - - - - - - -
85. C20H8orf82 C20H8orf82 91 0.799 - 0.799 - - - - - - -
86. trpt1 ENSDARG00000037628 1081 0.799 - 0.799 - - - - - - - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
87. si:ch211-76m11.11 si:ch211-76m11.11 460 0.798 - 0.798 - - - - - - -
88. ITGB1BP2 ENSDARG00000030176 2472 0.798 - 0.798 - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
89. unc119a ENSDARG00000034453 244 0.798 - 0.798 - - - - - - - unc-119 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090930-2]
90. tgm1l1 ENSDARG00000102106 1437 0.798 - 0.798 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
91. alad ENSDARG00000100372 1711 0.797 - 0.797 - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
92. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 0.797 - 0.797 - - - - - - - glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
93. ngf ngf 278 0.794 - - - - - 0.794 - - -
94. tgfbr1b ENSDARG00000042259 219 0.793 - - - - - - 0.793 - - transforming growth factor, beta receptor 1 b [Source:ZFIN;Acc:ZDB-GENE-091027-1]
95. alpk3a ENSDARG00000078989 1992 0.793 - 0.793 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
96. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 0.793 - - - - - - 0.793 - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
97. cpa2 ENSDARG00000010146 28 0.793 - - - - - - 0.793 - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
98. si:dkey-188i13.7 ENSDARG00000078389 81 0.792 - 0.792 - - - - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
99. sh3bp2 ENSDARG00000021982 61 0.792 - - - - - - 0.792 - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
100. hunk ENSDARG00000091317 241 0.792 - - - - - - 0.792 - - hormonally up-regulated Neu-associated kinase [Source:ZFIN;Acc:ZDB-GENE-050309-240]

There are 602 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA