Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vsnl1b

Gene Name Gene ID Reads Annotation
vsnl1b ENSDARG00000044053 1120 visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]










Genes with expression patterns similar to vsnl1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vsnl1b ENSDARG00000044053 1120 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
2. emp1 ENSDARG00000069632 251 2.453 - 0.772 - - - 0.790 0.891 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
3. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.342 - 0.736 - - - 0.874 0.732 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
4. cd99l2 ENSDARG00000056722 5036 2.289 - 0.712 - - - 0.803 0.774 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
5. TMEM132E ENSDARG00000090830 1197 2.289 - 0.787 - - - 0.766 0.736 - - transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
6. sall3b ENSDARG00000057586 982 1.94 - - - - - 0.967 0.973 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
7. itm2ca ENSDARG00000043448 1265 1.94 - - - - - 0.968 0.972 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
8. stx1b ENSDARG00000000503 2724 1.928 - - - - - 0.979 0.949 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
9. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.922 - - - - - 0.963 0.959 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
10. TUBB8P7_1 TUBB8P7_1 2722 1.92 - - - - - 0.947 0.973 - -
11. nadl1.1 1200 1.918 - - - - - 0.951 0.967 - - neural adhesion molecule L1.1, transcript variant X1
12. neflb ENSDARG00000012426 298 1.915 - - - - - 0.940 0.975 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
13. tuba1c ENSDARG00000055216 8384 1.913 - - - - - 0.959 0.954 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.913 - - - - - 0.948 0.965 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
15. gfap ENSDARG00000025301 5584 1.911 - - - - - 0.952 0.959 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
16. slc18a3a ENSDARG00000006356 1285 1.911 - - - - - 0.961 0.950 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
17. cdk5r1b ENSDARG00000045087 2075 1.908 - - - - - 0.987 0.921 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
18. aldocb ENSDARG00000019702 2111 1.908 - - - - - 0.939 0.969 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
19. nova2 ENSDARG00000017673 7685 1.908 - - - - - 0.986 0.922 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
20. kcnc3a ENSDARG00000055855 1821 1.907 - - - - - 0.968 0.939 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
21. ckbb ENSDARG00000043257 3503 1.906 - - - - - 0.981 0.925 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
22. dpysl3 ENSDARG00000002587 4381 1.904 - - - - - 0.965 0.939 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
23. nell2b ENSDARG00000062797 854 1.903 - - - - - 0.974 0.929 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
24. rab3ab ENSDARG00000043835 1267 1.902 - - - - - 0.935 0.967 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
25. pax6a ENSDARG00000103379 3061 1.901 - - - - - 0.987 0.914 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
26. TUBA1A ENSDARG00000001889 25294 1.901 - - - - - 0.961 0.940 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
27. EPB41L1 EPB41L1 1896 1.9 - - - - - 0.958 0.942 - -
28. gsx1 ENSDARG00000035735 1243 1.9 - - - - - 0.961 0.939 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
29. SPOCK1 ENSDARG00000074644 794 1.895 - - - - - 0.961 0.934 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
30. snap25a ENSDARG00000020609 4537 1.891 - - - - - 0.950 0.941 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
31. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.889 - - - - - 0.980 0.909 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
32. atp6v0cb ENSDARG00000036577 3472 1.885 - - - - - 0.948 0.937 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
33. SEMA7A ENSDARG00000078707 465 1.885 - - - - - 0.921 0.964 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
34. AKT3 AKT3 1729 1.884 - - - - - 0.930 0.954 - -
35. dnajc5aa ENSDARG00000042948 2885 1.877 - - - - - 0.980 0.897 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
36. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.875 - - - - - 0.925 0.950 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
37. STMN3 ENSDARG00000038465 1009 1.875 - - - - - 0.923 0.952 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
38. INA INA 950 1.874 - - - - - 0.981 0.893 - -
39. pcp4b 1080 1.874 - - - - - 0.911 0.963 - - Purkinje cell protein 4b
40. grin1a ENSDARG00000027828 1327 1.873 - - - - - 0.956 0.917 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
41. clstn3 ENSDARG00000073883 590 1.872 - - - - - 0.966 0.906 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
42. rbfox3 rbfox3 1443 1.872 - - - - - 0.953 0.919 - -
43. neurog1 ENSDARG00000056130 3924 1.872 - - - - - 0.924 0.948 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
44. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.872 - - - - - 0.951 0.921 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
45. pcdh1gc5 ENSDARG00000104826 10052 1.868 - - - - - 0.923 0.945 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
46. mllt11 ENSDARG00000071026 2518 1.86 - - - - - 0.947 0.913 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
47. gap43 ENSDARG00000099744 4114 1.859 - - - - - 0.922 0.937 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
48. sh3gl2 sh3gl2 1305 1.858 - - - - - 0.930 0.928 - -
49. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.858 - - - - - 0.956 0.902 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
50. cadm3 ENSDARG00000057013 1545 1.858 - - - - - 0.944 0.914 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
51. SNAP91 ENSDARG00000098809 556 1.857 - - - - - 0.888 0.969 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
52. tmeff1b ENSDARG00000056740 11253 1.855 - - - - - 0.954 0.901 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
53. nova1 ENSDARG00000020178 4129 1.855 - - - - - 0.946 0.909 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
54. msi1 ENSDARG00000010710 2634 1.853 - - - - - 0.945 0.908 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
55. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.851 - - - - - 0.912 0.939 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
56. sncgb ENSDARG00000109715 1014 1.851 - - - - - 0.910 0.941 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
57. elavl3 ENSDARG00000014420 8644 1.851 - - - - - 0.916 0.935 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
58. dbx2 2971 1.85 - - - - - 0.890 0.960 - - developing brain homeobox 2
59. vgf ENSDARG00000105529 247 1.849 - - - - - 0.925 0.924 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
60. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.849 - - - - - 0.924 0.925 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
61. epha4b ENSDARG00000011600 3110 1.849 - - - - - 0.928 0.921 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
62. cacng8b ENSDARG00000070626 176 1.849 - - - - - 0.898 0.951 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
63. slc8a2b ENSDARG00000100592 598 1.849 - - - - - 0.908 0.941 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
64. gng3 ENSDARG00000009553 2530 1.848 - - - - - 0.896 0.952 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
65. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.845 - - - - - 0.910 0.935 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
66. nes ENSDARG00000088805 2710 1.845 - - - - - 0.910 0.935 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
67. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.845 - - - - - 0.957 0.888 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
68. rap2ip rap2ip 681 1.844 - - - - - 0.902 0.942 - -
69. CABZ01111990.1 CABZ01111990.1 4374 1.843 - - - - - 0.896 0.947 - -
70. stxbp1a ENSDARG00000001994 5154 1.843 - - - - - 0.884 0.959 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
71. cspg5a ENSDARG00000069981 1699 1.842 - - - - - 0.897 0.945 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
72. her4.3 ENSDARG00000070770 613 1.842 - - - - - 0.904 0.938 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
73. nrarpb ENSDARG00000018958 6225 1.842 - - - - - 0.905 0.937 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
74. GRIN3A ENSDARG00000075802 27 1.839 - - - - - 0.901 0.938 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
75. elavl4 ENSDARG00000045639 998 1.838 - - - - - 0.885 0.953 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
76. scn2b ENSDARG00000101713 796 1.837 - - - - - 0.868 0.969 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
77. AGO1 ENSDARG00000092644 4521 1.837 - - - - - 0.944 0.893 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
78. slc1a2b ENSDARG00000102453 3136 1.835 - - - - - 0.935 0.900 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
79. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.835 - - - - - 0.926 0.909 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
80. lhx1a ENSDARG00000014018 958 1.833 - - - - - 0.929 0.904 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
81. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.83 - - - - - 0.891 0.939 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
82. olfm1b ENSDARG00000014053 1392 1.83 - - - - - 0.893 0.937 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
83. lrrc4.1 ENSDARG00000069402 323 1.83 - - - - - 0.892 0.938 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
84. chat chat 463 1.829 - - - - - 0.902 0.927 - -
85. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.829 - - - - - 0.925 0.904 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
86. adam23a ENSDARG00000062323 580 1.829 - - - - - 0.914 0.915 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
87. dync1i1 ENSDARG00000060948 554 1.828 - - - - - 0.900 0.928 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
88. NPTXR NPTXR 241 1.828 - - - - - 0.869 0.959 - -
89. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.827 - - - - - 0.901 0.926 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
90. necap1 ENSDARG00000020798 612 1.827 - - - - - 0.860 0.967 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
91. hmgb1b ENSDARG00000030479 10398 1.826 - - - - - 0.905 0.921 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
92. napg napg 645 1.826 - - - - - 0.930 0.896 - -
93. tmem35 ENSDARG00000052567 5685 1.825 - - - - - 0.918 0.907 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
94. slc35g2b ENSDARG00000045447 378 1.824 - - - - - 0.892 0.932 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
95. slc32a1 ENSDARG00000059775 1092 1.823 - - - - - 0.907 0.916 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
96. nhlh2 ENSDARG00000025495 1860 1.822 - - - - - 0.885 0.937 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
97. si:dkey-28b4.8 ENSDARG00000002840 1277 1.819 - - - - - 0.958 0.861 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
98. scn8aa ENSDARG00000005775 792 1.819 - - - - - 0.958 0.861 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
99. ZFHX3 ENSDARG00000103057 7759 1.818 - - - - - 0.904 0.914 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
100. gabrg2 ENSDARG00000053665 434 1.818 - - - - - 0.875 0.943 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]

There are 1721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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