Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vsnl1a

Gene Name Gene ID Reads Annotation
vsnl1a ENSDARG00000023228 1584 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]










Genes with expression patterns similar to vsnl1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vsnl1a ENSDARG00000023228 1584 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
2. cnrip1a ENSDARG00000091683 1491 4.439 0.720 0.911 - - - 0.934 0.877 - 0.997 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
3. BX957337.1 BX957337.1 1685 3.66 - 0.802 - - - 0.975 0.887 - 0.996
4. mapk12b ENSDARG00000006409 2246 3.606 0.886 0.910 - - - 0.931 0.879 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
5. dpysl5a ENSDARG00000011141 1827 3.552 0.769 0.915 - - - 0.970 0.898 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
6. adam23a ENSDARG00000062323 580 3.547 0.860 0.980 - - - 0.911 0.796 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
7. pcsk1nl ENSDARG00000076170 1232 3.539 0.721 0.975 - - - 0.960 0.883 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
8. scrt2 ENSDARG00000056175 4331 3.514 0.899 0.792 - - - 0.948 0.875 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
9. syt11a ENSDARG00000057913 1145 3.471 0.784 0.882 - - - 0.975 0.830 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
10. stx1b ENSDARG00000000503 2724 3.468 0.714 0.933 - - - 0.911 0.910 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
11. scn8aa ENSDARG00000005775 792 3.468 0.715 0.963 - - - 0.935 0.855 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
12. stmn2a ENSDARG00000033234 2272 3.458 0.726 0.867 - - - 0.985 0.880 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
13. amph ENSDARG00000007663 599 3.456 0.815 0.849 - - - 0.901 0.891 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
14. snap25a ENSDARG00000020609 4537 3.449 0.754 0.860 - - - 0.953 0.882 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
15. si:ch73-21g5.7 ENSDARG00000093156 9412 3.447 0.738 0.918 - - - 0.923 0.868 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
16. TUBB8P7_1 TUBB8P7_1 2722 3.438 0.769 0.836 - - - 0.956 0.877 - -
17. gap43 ENSDARG00000099744 4114 3.432 0.803 0.825 - - - 0.959 0.845 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
18. nadl1.1 1200 3.43 0.783 0.926 - - - 0.849 0.872 - - neural adhesion molecule L1.1, transcript variant X1
19. pcdh1gc5 ENSDARG00000104826 10052 3.41 0.786 0.802 - - - 0.968 0.854 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
20. nova2 ENSDARG00000017673 7685 3.375 0.800 0.900 - - - 0.835 0.840 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
21. kcnc3a ENSDARG00000055855 1821 3.358 0.804 0.737 - - - 0.912 0.905 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
22. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.324 0.795 0.731 - - - 0.971 0.827 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
23. stmn2b ENSDARG00000070537 1586 3.317 0.744 0.851 - - - 0.962 0.760 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
24. rbfox3 rbfox3 1443 3.308 0.769 0.811 - - - 0.839 0.889 - -
25. sox2 ENSDARG00000070913 2763 3.307 0.754 0.906 - - - 0.841 0.806 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
26. mir10d-1 mir10d-1 860 3.307 0.722 0.823 - - - 0.902 0.860 - -
27. slc1a3a ENSDARG00000104431 9888 3.275 0.805 0.763 - - - 0.968 0.739 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
28. scdb ENSDARG00000030265 271 3.271 0.725 0.916 - - - 0.929 0.701 - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
29. pax3a ENSDARG00000010192 626 3.27 0.758 0.762 - - - 0.980 0.770 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
30. nes ENSDARG00000088805 2710 3.266 0.818 0.850 - - - 0.767 0.831 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
31. rtn1b ENSDARG00000021143 1682 3.261 0.775 0.784 - - - 0.966 0.736 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
32. CHL1 CHL1 1553 3.234 0.734 0.957 - - - 0.747 0.796 - -
33. dpysl3 ENSDARG00000002587 4381 3.199 0.748 0.717 - - - 0.857 0.877 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
34. CLIP3 ENSDARG00000054456 734 3.185 0.717 0.809 - - - 0.864 0.795 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
35. tnika ENSDARG00000056218 728 3.138 0.715 0.790 - - - 0.887 0.746 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
36. gpr144 gpr144 479 3.022 0.784 0.746 - - - 0.784 0.708 - -
37. SNAP91 ENSDARG00000098809 556 2.834 - 0.977 - - - 0.945 0.912 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
38. slc32a1 ENSDARG00000059775 1092 2.812 - 0.986 - - - 0.934 0.892 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
39. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.794 0.956 - - - - 0.934 0.904 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
40. TUSC5 TUSC5 1436 2.774 - 0.908 - - - 0.980 0.886 - -
41. lrrc4.1 ENSDARG00000069402 323 2.757 - 0.944 - - - 0.932 0.881 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
42. cdk5r1b ENSDARG00000045087 2075 2.743 - - - - - 0.844 0.900 - 0.999 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
43. atp2b3b ENSDARG00000023445 1424 2.722 - 0.961 - - - 0.976 0.785 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
44. slc17a6b ENSDARG00000041150 823 2.716 0.961 - - - - 0.922 0.833 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
45. tmeff1b ENSDARG00000056740 11253 2.711 - - - - - 0.876 0.876 - 0.959 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
46. stmn1b ENSDARG00000033655 9491 2.709 0.875 - - - - 0.968 0.866 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
47. gfap ENSDARG00000025301 5584 2.705 0.886 - - - - 0.919 0.900 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
48. stxbp1a ENSDARG00000001994 5154 2.697 - 0.855 - - - 0.970 0.872 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
49. cers6 ENSDARG00000053583 247 2.696 - 0.892 - - - 0.941 0.863 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
50. SV2B SV2B 208 2.679 - 0.849 - - - 0.924 0.906 - -
51. tuba1c ENSDARG00000055216 8384 2.678 0.828 - - - - 0.953 0.897 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
52. rab3ab ENSDARG00000043835 1267 2.676 0.820 - - - - 0.949 0.907 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
53. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.673 0.864 - - - - 0.937 0.872 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
54. sall3b ENSDARG00000057586 982 2.654 - 0.893 - - - 0.856 0.905 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
55. st18 663 2.644 - 0.877 - - - 0.965 0.802 - - suppression of tumorigenicity 18, zinc finger
56. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.633 - 0.891 - - - 0.846 0.896 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
57. thsd7ba ENSDARG00000095022 231 2.633 - 0.889 - - - 0.897 0.847 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
58. MAP1A MAP1A 847 2.628 - 0.799 - - - 0.959 0.870 - -
59. olfm1b ENSDARG00000014053 1392 2.627 0.768 - - - - 0.969 0.890 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
60. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.625 - 0.889 - - - 0.906 0.830 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
61. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.625 0.757 - - - - 0.978 0.890 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
62. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.625 - 0.892 - - - 0.883 0.850 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
63. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.625 0.748 - - - - 0.973 0.904 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
64. MAPK8IP1_1 MAPK8IP1_1 186 2.614 0.891 - - - - 0.860 0.863 - -
65. pax6a ENSDARG00000103379 3061 2.611 0.848 - - - - 0.860 0.903 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
66. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.598 - 0.934 - - - 0.891 0.773 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
67. sv2bb ENSDARG00000060711 196 2.595 0.820 0.886 - - - - 0.889 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
68. atp6v0a2a ENSDARG00000035538 278 2.595 0.867 - - - - 0.852 0.876 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
69. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.594 0.783 - - - - 0.918 0.893 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
70. nbeaa ENSDARG00000070080 862 2.593 0.893 - - - - 0.828 0.872 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
71. gng3 ENSDARG00000009553 2530 2.589 0.870 0.831 - - - - 0.888 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
72. myt1b ENSDARG00000102879 5411 2.589 - 0.870 - - - 0.900 0.819 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
73. zic4 ENSDARG00000031307 1228 2.587 - 0.899 - - - 0.980 0.708 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
74. plp1a ENSDARG00000103732 3544 2.586 0.827 - - - - 0.911 0.848 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
75. syt2a ENSDARG00000025206 681 2.585 0.926 0.748 - - - 0.911 - - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
76. ppp3ca ENSDARG00000004988 615 2.582 0.813 - - - - 0.937 0.832 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
77. nova1 ENSDARG00000020178 4129 2.579 - 0.737 - - - 0.950 0.892 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
78. st8sia5 ENSDARG00000036584 529 2.575 0.786 - - - - 0.931 0.858 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
79. dnajc6 ENSDARG00000079891 438 2.575 0.859 - - - - 0.884 0.832 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
80. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.575 - 0.875 - - - 0.852 0.848 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
81. pnoca ENSDARG00000025024 467 2.574 0.748 - - - - 0.944 0.882 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
82. jag1a ENSDARG00000030289 1275 2.571 0.855 0.893 - - - - 0.823 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
83. MAP6 MAP6 643 2.571 - 0.855 - - - 0.856 0.860 - -
84. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.57 - 0.711 - - - 0.987 0.872 - -
85. AP3B2 1874 2.564 - 0.849 - - - 0.904 0.811 - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
86. slc18a3a ENSDARG00000006356 1285 2.561 - 0.864 - - - 0.818 0.879 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
87. mllt11 ENSDARG00000071026 2518 2.56 0.801 - - - - 0.959 0.800 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
88. slc1a2b ENSDARG00000102453 3136 2.552 - 0.732 - - - 0.946 0.874 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
89. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.55 0.726 - - - - 0.916 0.908 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
90. hmp19 2554 2.549 0.762 - - - - 0.948 0.839 - - HMP19 protein
91. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.547 0.890 - - - - 0.945 0.712 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
92. SPOCK1 ENSDARG00000074644 794 2.545 0.871 - - - - 0.809 0.865 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
93. atp6v0cb ENSDARG00000036577 3472 2.543 0.773 - - - - 0.905 0.865 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
94. nxph1 ENSDARG00000033447 182 2.537 0.806 - - - - 0.857 0.874 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
95. pou4f1 ENSDARG00000005559 821 2.537 0.771 - - - - 0.862 0.904 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
96. ckbb ENSDARG00000043257 3503 2.536 0.794 - - - - 0.875 0.867 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
97. nrxn3b ENSDARG00000062693 192 2.533 0.883 - - - - 0.883 0.767 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
98. stmn4l ENSDARG00000043932 654 2.533 0.768 - - - - 0.899 0.866 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
99. clstn3 ENSDARG00000073883 590 2.533 0.855 - - - - 0.783 0.895 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
100. INA INA 950 2.533 0.746 - - - - 0.892 0.895 - -

There are 2026 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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