Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vsg1

Gene Name Gene ID Reads Annotation
vsg1 1870 vessel-specific 1










Genes with expression patterns similar to vsg1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vsg1 1870 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vessel-specific 1
2. gpr182 ENSDARG00000036616 455 3.453 0.909 0.835 - - - 0.897 0.812 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
3. CABZ01018247.1 CABZ01018247.1 609 3.249 0.805 0.799 - - - 0.723 0.922 - -
4. sox18 ENSDARG00000058598 678 3.088 0.797 0.705 - - - 0.774 0.812 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
5. mrc1a ENSDARG00000102100 1260 2.727 0.890 - - - - 0.943 0.894 - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
6. prcp ENSDARG00000037883 473 2.572 0.801 - - - - 0.860 0.911 - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
7. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 2.552 0.888 - - - - 0.809 0.855 - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
8. cdh5 ENSDARG00000075549 2288 2.515 0.912 - - - - 0.726 0.877 - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
9. fli1a ENSDARG00000054632 330 2.512 0.879 - - - - 0.850 0.783 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
10. il13ra2 ENSDARG00000039436, ENSDARG00000111925 286 2.482 - 0.836 - - - 0.790 0.856 - - interleukin 13 receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030521-10]
11. lmo2 ENSDARG00000095019 1098 2.453 0.848 - - - - 0.746 0.859 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
12. erg ENSDARG00000077304 161 2.428 0.790 - - - - 0.815 0.823 - - v-ets avian erythroblastosis virus E26 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-041212-40]
13. si:dkey-261h17.1 ENSDARG00000095268 11403 2.42 0.842 - - - - 0.800 0.778 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
14. stab1 ENSDARG00000076484 717 2.415 0.768 - - - - 0.717 0.930 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
15. sele ENSDARG00000009123 122 2.407 - 0.749 - - - 0.767 0.891 - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
16. exoc3l2a ENSDARG00000008414 227 2.401 0.796 - - - - 0.739 0.866 - - exocyst complex component 3-like 2a [Source:ZFIN;Acc:ZDB-GENE-060526-343]
17. FGD5 FGD5 250 2.396 0.855 0.760 - - - - 0.781 - -
18. clec14a ENSDARG00000103533 718 2.345 0.843 - - - - 0.785 0.717 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
19. tie1 ENSDARG00000004105 400 2.342 0.869 - - - - 0.711 0.762 - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
20. fam174b ENSDARG00000068709 1171 2.251 - 0.714 - - - 0.765 0.772 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
21. yrk ENSDARG00000004378 618 2.25 - 0.712 - - - 0.836 0.702 - - Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
22. si:ch73-61d6.3 ENSDARG00000057826 274 2.187 0.741 - - - - 0.719 0.727 - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
23. micall2a ENSDARG00000102366 173 1.696 - - - - - 0.779 0.917 - - mical-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5409]
24. she ENSDARG00000087956 941 1.69 - - - - - 0.878 0.812 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
25. PCDH12 ENSDARG00000076594 381 1.678 0.909 0.769 - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
26. si:ch211-207j7.2 ENSDARG00000090793 316 1.667 - 0.898 - - - - 0.769 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
27. tnfaip8l3 ENSDARG00000088709 345 1.656 - - - - - 0.815 0.841 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
28. CR376783.1 ENSDARG00000074235 259 1.637 0.818 - - - - - 0.819 - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
29. foxc1a ENSDARG00000091481 1059 1.598 - - - - - 0.764 0.834 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
30. myct1 myct1 217 1.586 0.811 - - - - 0.775 - - -
31. tspan4 tspan4 692 1.586 - 0.765 - - - - 0.821 - -
32. atp1a1a.4 ENSDARG00000001870 1864 1.584 - 0.783 - - - - 0.801 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
33. AEBP1 ENSDARG00000091726 1431 1.576 - 0.792 - - - 0.784 - - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
34. etv2 ENSDARG00000053868 715 1.562 - 0.799 - - - 0.763 - - - ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
35. fli1b ENSDARG00000040080 348 1.56 - - - - - 0.804 0.756 - - Fli-1 proto-oncogene, ETS transcription factor b [Source:ZFIN;Acc:ZDB-GENE-031114-3]
36. mpx ENSDARG00000019521 562 1.553 0.800 - - - - - 0.753 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
37. si:dkey-189o20.1 si:dkey-189o20.1 47 1.547 0.754 - - - - 0.793 - - -
38. col4a1 ENSDARG00000055009 3083 1.546 0.710 - - - - - 0.836 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
39. BX571714.1 ENSDARG00000114727 243 1.529 - 0.814 - - - - 0.715 - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
40. pias4b ENSDARG00000042215 12 1.526 0.800 - - - - - 0.726 - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
41. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 1.525 - 0.782 - - - - 0.743 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
42. si:dkey-16n15.6 ENSDARG00000095805 18 1.519 0.800 - 0.719 - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
43. pxk ENSDARG00000063195 851 1.516 - 0.729 - - - - 0.787 - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
44. ponzr1 ENSDARG00000090444 540 1.508 - 0.702 - - - - 0.806 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
45. sod2 ENSDARG00000042644 1382 1.504 - 0.756 - - - - 0.748 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
46. bxdc2 ENSDARG00000098935 1348 1.503 - 0.721 - - - 0.782 - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
47. snrnp40 ENSDARG00000023160 1108 1.503 - 0.753 - - - - 0.750 - - small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]
48. shank3b ENSDARG00000063054 148 1.5 0.759 - - - - - 0.741 - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
49. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 1.498 0.787 - - - - - 0.711 - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
50. ccm2l ENSDARG00000063089 100 1.487 0.759 - - - - - 0.728 - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
51. foxj1b ENSDARG00000088290 343 1.486 - - - - - 0.783 0.703 - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
52. si:ch1073-429i10.1 ENSDARG00000075664 471 1.469 0.764 - - - - 0.705 - - - si:ch1073-429i10.1 [Source:ZFIN;Acc:ZDB-GENE-120215-259]
53. pdzk1ip1l pdzk1ip1l 171 1.464 0.709 - - - - 0.755 - - -
54. morn3 ENSDARG00000021697, ENSDARG00000110843 93 1.457 - - - - - 0.701 0.756 - - MORN repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-152]
55. brd2a ENSDARG00000022280 3481 1.453 - 0.752 - - - - - 0.701 - bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
56. map3k19 ENSDARG00000094272 59 1.448 - 0.700 - - - - 0.748 - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
57. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.436 - 0.710 - - - 0.726 - - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
58. kctd13 ENSDARG00000044769, ENSDARG00000112000 569 1.421 - 0.712 - - - - - 0.709 - potassium channel tetramerization domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060825-162]
59. capsla ENSDARG00000103521 277 1.419 - - - - - 0.705 0.714 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
60. afap1l1b ENSDARG00000056453 583 1.416 - 0.711 - - - 0.705 - - - actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
61. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.929 0.929 - - - - - - - - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
62. si:ch73-108h4.3 si:ch73-108h4.3 193 0.917 0.917 - - - - - - - -
63. CU915814.1 CU915814.1 245 0.913 0.913 - - - - - - - -
64. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.913 - - - - - - 0.913 - - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
65. si:dkey-182g1.5 si:dkey-182g1.5 22 0.909 - - - - - - 0.909 - -
66. ecscr ENSDARG00000087457 319 0.906 - - - - - 0.906 - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
67. mfng ENSDARG00000042925 104 0.905 0.905 - - - - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
68. si:dkey-222o15.5 si:dkey-222o15.5 27 0.905 0.905 - - - - - - - -
69. si:ch1073-185p12.2 ENSDARG00000100199 7 0.905 0.905 - - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
70. tgfb1b ENSDARG00000034895 608 0.903 0.903 - - - - - - - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
71. adra1d ENSDARG00000024101 387 0.898 0.898 - - - - - - - - adrenoceptor alpha 1D [Source:ZFIN;Acc:ZDB-GENE-090312-203]
72. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 0.895 - 0.895 - - - - - - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
73. ncf1 ENSDARG00000033735 83 0.893 - - - - - 0.893 - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
74. itgb2 ENSDARG00000016939 55 0.889 - - - - - 0.889 - - - integrin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-110411-4]
75. cdh17 ENSDARG00000005112 3816 0.884 - 0.884 - - - - - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
76. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.884 - - - - - 0.884 - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
77. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 0.88 - - - - - - 0.880 - - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
78. pter ENSDARG00000063375 217 0.88 0.880 - - - - - - - - phosphotriesterase related [Source:ZFIN;Acc:ZDB-GENE-060825-190]
79. cyp26b1 ENSDARG00000077121 1364 0.871 0.871 - - - - - - - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
80. LPIN1 ENSDARG00000020239, ENSDARG00000112314 75 0.87 0.870 - - - - - - - - lipin 1 [Source:ZFIN;Acc:ZDB-GENE-080722-2]
81. cldn15la ENSDARG00000016081 197 0.868 - - - - - 0.868 - - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
82. fsta ENSDARG00000052846, ENSDARG00000113185 539 0.867 - - - - - - 0.867 - - follistatin a [Source:ZFIN;Acc:ZDB-GENE-990714-11]
83. si:dkey-189h5.6 ENSDARG00000095188 50 0.866 - - - - - - 0.866 - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
84. C18H15orf38 C18H15orf38 370 0.866 - 0.866 - - - - - - -
85. tmx2b ENSDARG00000007786 3151 0.865 - 0.865 - - - - - - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
86. hmha1 hmha1 58 0.863 - - - - - - 0.863 - -
87. AMBRA1_1 AMBRA1_1 2179 0.862 - 0.862 - - - - - - -
88. DCHS1 DCHS1 209 0.862 - - - - - 0.862 - - -
89. atxn7l2b ENSDARG00000056268 226 0.861 - - - - - 0.861 - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
90. slc6a4a ENSDARG00000061165 206 0.859 0.859 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
91. slc12a3 ENSDARG00000013855 990 0.858 - 0.858 - - - - - - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
92. fbxo15 ENSDARG00000016897 18 0.857 0.857 - - - - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
93. hcrtr2 ENSDARG00000023722 70 0.857 0.857 - - - - - - - - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
94. ZNF408 ENSDARG00000036043 232 0.857 0.857 - - - - - - - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
95. DPYD DPYD 52 0.857 - - - - - - 0.857 - -
96. npnt ENSDARG00000018721 19 0.857 0.857 - - - - - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
97. ugt5e1 ENSDARG00000058048 25 0.857 0.857 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
98. aqp7 ENSDARG00000026787 37 0.857 0.857 - - - - - - - - aquaporin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6461]
99. eng2b eng2b 865 0.857 0.857 - - - - - - - -
100. ddx46 ENSDARG00000099458 24 0.857 0.857 - - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]

There are 788 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA