Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vrtn

Gene Name Gene ID Reads Annotation
vrtn ENSDARG00000061963, ENSDARG00000115943 42 vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]










Genes with expression patterns similar to vrtn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vrtn ENSDARG00000061963, ENSDARG00000115943 42 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
2. gucy1b3 92 2.802 1.000 1.000 - - - - 0.802 - - guanylate cyclase 1, soluble, beta 3
3. cdk20 ENSDARG00000003867 27 2.705 0.705 1.000 - - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
4. zgc:110434 21 2 - 1.000 - - - - 1.000 - - zgc:110434
5. zeb2b ENSDARG00000078416 23 2 - 1.000 - - - - 1.000 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
6. CLDN20 26 2 - 1.000 - - - - 1.000 - - claudin 20, transcript variant X2
7. SCAMP5 SCAMP5 19 2 - 1.000 - - - - 1.000 - -
8. kif17 ENSDARG00000055238 12 2 - 1.000 - - - - 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
9. pax4 ENSDARG00000021336 29 1.957 - - 0.957 - - - 1.000 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
10. si:dkey-220a11.9 si:dkey-220a11.9 10 1.933 - 1.000 - - - - - 0.933 -
11. zgc:114041 ENSDARG00000052109 76 1.922 - - 0.922 - - - 1.000 - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
12. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.904 - - 0.904 - - - 1.000 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
13. wbscr27 wbscr27 70 1.859 - - 0.859 - - - 1.000 - -
14. NPPC ENSDARG00000068126 45 1.839 - 1.000 - - - - 0.839 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
15. KCNAB2 KCNAB2 129 1.822 - 1.000 - - - - 0.822 - -
16. NARS2 ENSDARG00000098441 57 1.812 0.918 - - - - - - 0.894 - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
17. cacna1ab ENSDARG00000006923 12 1.766 - 1.000 - - - - 0.766 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
18. gpsm1a ENSDARG00000092517 784 1.742 - - 0.742 - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
19. tagln3a ENSDARG00000079805 123 1.738 - 1.000 - - - - 0.738 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
20. CABZ01083834.1 CABZ01083834.1 38 1.737 - - - 0.760 - - - 0.977 -
21. zgc:110353 ENSDARG00000039443 80 1.716 - - - - - - 1.000 0.716 - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
22. hcst ENSDARG00000092074 172 1.708 - 1.000 - - - - - - 0.708 hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
23. zgc:113691 ENSDARG00000038898 36 1.705 0.705 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
24. CABZ01066439.2 CABZ01066439.2 5 1.705 0.705 1.000 - - - - - - -
25. uckl1a ENSDARG00000001686 21 1.705 0.705 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
26. BX469915.2 BX469915.2 48 1.705 0.705 1.000 - - - - - - -
27. lars2 ENSDARG00000075337 31 1.705 0.705 - - - - - 1.000 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
28. hcrt ENSDARG00000070932 4 1.705 0.705 - - - - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
29. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.705 0.705 - - - - - 1.000 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
30. rgs7 rgs7 208 1.691 - 0.946 - - - - - 0.745 -
31. ENSDARG00000086878 ENSDARG00000086878 332 1.679 0.781 0.898 - - - - - - -
32. SLC36A4 ENSDARG00000039661 175 1.672 - 0.877 0.795 - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
33. spon2b ENSDARG00000002732 115 1.652 - 0.806 - - - - - 0.846 - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
34. MDH1B ENSDARG00000018008 29 1.637 0.705 - - - - - - 0.932 - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
35. srxn1 ENSDARG00000079160 265 1.604 - - 0.896 - - - - 0.708 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
36. bco2b ENSDARG00000041715 13 1.594 0.705 0.889 - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
37. GMIP ENSDARG00000077249 43 1.587 0.705 - - - - - - 0.882 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
38. fank1 ENSDARG00000039657 9 1.569 0.705 - - - - - - - 0.864 fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
39. neurod neurod 1189 1.564 - 0.816 - - - - 0.748 - -
40. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.507 - 0.767 0.740 - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
41. dtnbb ENSDARG00000013020 280 1.504 - 0.756 - - - - - 0.748 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
42. si:ch211-57m13.15 si:ch211-57m13.15 206 1.467 - - 0.744 - - - - 0.723 -
43. ccdc113 ENSDARG00000006981 67 1.43 - 0.707 - - 0.723 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
44. pcdh2ac ENSDARG00000099783 325 1.429 - 0.710 - - - - 0.719 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
45. CABZ01061549.1 CABZ01061549.1 17 1.409 0.705 0.704 - - - - - - -
46. U1_20 U1_20 0 1 - - - - - - 1.000 - -
47. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
48. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
49. prdm14 ENSDARG00000045371 106 1 - 1.000 - - - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
50. GPR116 GPR116 1 1 - - - - - - 1.000 - -
51. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
52. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
53. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
54. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
55. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1 - - - - - - 1.000 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
56. st8sia3 ENSDARG00000045301 3 1 - - - - - - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
57. sox12 ENSDARG00000025847 681 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
58. htr3a ENSDARG00000089212 51 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
59. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
60. SRCIN1_1 SRCIN1_1 11 1 - 1.000 - - - - - - -
61. tg ENSDARG00000020084 40 1 - - - - - - 1.000 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
62. baiap2l2 baiap2l2 30 1 - - - - - - 1.000 - -
63. CACNA2D1 ENSDARG00000073752 6 1 - 1.000 - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
64. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
65. morc3b ENSDARG00000043271 8 1 - 1.000 - - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
66. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
67. CU633848.1 CU633848.1 4 1 - - - - - - 1.000 - -
68. AGO3 AGO3 12 1 - 1.000 - - - - - - -
69. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
70. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
71. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
72. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
73. TGM1 ENSDARG00000017799 3 1 - 1.000 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
74. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
75. BX323994.1 ENSDARG00000078927 15 1 - - - - - - 1.000 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
76. GMEB2 ENSDARG00000093240 6 1 - 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
77. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
78. HELZ2 ENSDARG00000012600 2 1 - - - - - - 1.000 - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
79. si:dkey-167i21.2 ENSDARG00000093886 10 1 - - - - - - 1.000 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
80. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
81. BX897671.1 BX897671.1 10 1 - - - - - - 1.000 - -
82. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - 1.000 - -
83. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
84. rbfox3l rbfox3l 34 1 - 1.000 - - - - - - -
85. xkr8.2 ENSDARG00000076820 51 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
86. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
87. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
88. U6_32 U6_32 0 1 - 1.000 - - - - - - -
89. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
90. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - - - 1.000 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
91. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1 - 1.000 - - - - - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
92. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
93. yjefn3 ENSDARG00000061692 211 1 - 1.000 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
94. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
95. igsf5 igsf5 85 1 - - - - - - 1.000 - -
96. CR318653.1 ENSDARG00000104557 29 1 - - - - - - 1.000 - -
97. HIST1H2BA ENSDARG00000116654 10 1 - 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
98. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
99. CR450793.1 ENSDARG00000088927 6 1 - - - - - - 1.000 - - zinc finger protein 436-like [Source:NCBI gene;Acc:103911751]
100. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]

There are 1206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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