Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vrtn

Gene Name Gene ID Reads Annotation
vrtn ENSDARG00000061963, ENSDARG00000115943 42 vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]










Genes with expression patterns similar to vrtn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vrtn ENSDARG00000061963, ENSDARG00000115943 42 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
2. gucy1b3 92 2.802 1.000 1.000 - - - - 0.802 - - guanylate cyclase 1, soluble, beta 3
3. cdk20 ENSDARG00000003867 27 2.705 0.705 1.000 - - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
4. kif17 ENSDARG00000055238 12 2 - 1.000 - - - - 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
5. zeb2b ENSDARG00000078416 23 2 - 1.000 - - - - 1.000 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
6. zgc:110434 21 2 - 1.000 - - - - 1.000 - - zgc:110434
7. CLDN20 26 2 - 1.000 - - - - 1.000 - - claudin 20, transcript variant X2
8. SCAMP5 SCAMP5 19 2 - 1.000 - - - - 1.000 - -
9. pax4 ENSDARG00000021336 29 1.957 - - 0.957 - - - 1.000 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
10. si:dkey-220a11.9 si:dkey-220a11.9 10 1.933 - 1.000 - - - - - 0.933 -
11. zgc:114041 ENSDARG00000052109 76 1.922 - - 0.922 - - - 1.000 - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
12. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.904 - - 0.904 - - - 1.000 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
13. wbscr27 wbscr27 70 1.859 - - 0.859 - - - 1.000 - -
14. NPPC ENSDARG00000068126 45 1.839 - 1.000 - - - - 0.839 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
15. KCNAB2 KCNAB2 129 1.822 - 1.000 - - - - 0.822 - -
16. NARS2 ENSDARG00000098441 57 1.812 0.918 - - - - - - 0.894 - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
17. cacna1ab ENSDARG00000006923 12 1.766 - 1.000 - - - - 0.766 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
18. gpsm1a ENSDARG00000092517 784 1.742 - - 0.742 - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
19. tagln3a ENSDARG00000079805 123 1.738 - 1.000 - - - - 0.738 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
20. CABZ01083834.1 CABZ01083834.1 38 1.737 - - - 0.760 - - - 0.977 -
21. zgc:110353 ENSDARG00000039443 80 1.716 - - - - - - 1.000 0.716 - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
22. hcst ENSDARG00000092074 172 1.708 - 1.000 - - - - - - 0.708 hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
23. hcrt ENSDARG00000070932 4 1.705 0.705 - - - - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
24. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.705 0.705 - - - - - 1.000 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
25. zgc:113691 ENSDARG00000038898 36 1.705 0.705 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
26. CABZ01066439.2 CABZ01066439.2 5 1.705 0.705 1.000 - - - - - - -
27. uckl1a ENSDARG00000001686 21 1.705 0.705 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
28. BX469915.2 BX469915.2 48 1.705 0.705 1.000 - - - - - - -
29. lars2 ENSDARG00000075337 31 1.705 0.705 - - - - - 1.000 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
30. rgs7 rgs7 208 1.691 - 0.946 - - - - - 0.745 -
31. ENSDARG00000086878 ENSDARG00000086878 332 1.679 0.781 0.898 - - - - - - -
32. SLC36A4 ENSDARG00000039661 175 1.672 - 0.877 0.795 - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
33. spon2b ENSDARG00000002732 115 1.652 - 0.806 - - - - - 0.846 - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
34. MDH1B ENSDARG00000018008 29 1.637 0.705 - - - - - - 0.932 - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
35. srxn1 ENSDARG00000079160 265 1.604 - - 0.896 - - - - 0.708 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
36. bco2b ENSDARG00000041715 13 1.594 0.705 0.889 - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
37. GMIP ENSDARG00000077249 43 1.587 0.705 - - - - - - 0.882 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
38. fank1 ENSDARG00000039657 9 1.569 0.705 - - - - - - - 0.864 fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
39. neurod neurod 1189 1.564 - 0.816 - - - - 0.748 - -
40. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.507 - 0.767 0.740 - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
41. dtnbb ENSDARG00000013020 280 1.504 - 0.756 - - - - - 0.748 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
42. si:ch211-57m13.15 si:ch211-57m13.15 206 1.467 - - 0.744 - - - - 0.723 -
43. ccdc113 ENSDARG00000006981 67 1.43 - 0.707 - - 0.723 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
44. pcdh2ac ENSDARG00000099783 325 1.429 - 0.710 - - - - 0.719 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
45. CABZ01061549.1 CABZ01061549.1 17 1.409 0.705 0.704 - - - - - - -
46. rhoab ENSDARG00000094673 26 1 - - - - - - 1.000 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
47. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
48. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
49. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
50. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
51. TMEM74B ENSDARG00000078868 45 1 - - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
52. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - 1.000 - -
53. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
54. SNORA81_1 SNORA81_1 8 1 - 1.000 - - - - - - -
55. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
56. TMC2 TMC2 5 1 - 1.000 - - - - - - -
57. RIMS1 RIMS1 9 1 - 1.000 - - - - - - -
58. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - 1.000 - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
59. si:ch211-38m6.6 ENSDARG00000076959 12 1 - 1.000 - - - - - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
60. wu:fj49c06 wu:fj49c06 0 1 - 1.000 - - - - - - -
61. CR854829.1 ENSDARG00000101518 17 1 - - - - - - 1.000 - -
62. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1 - 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
63. GJD2_1 GJD2_1 3045 1 - 1.000 - - - - - - -
64. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
65. si:dkey-57l19.1 ENSDARG00000098143 1 1 - 1.000 - - - - - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
66. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 - - - - - - 1.000 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
67. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -
68. CAMSAP2 CAMSAP2 109 1 - - - - - - 1.000 - -
69. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1 - - - - - - 1.000 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
70. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
71. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
72. BX119910.13 BX119910.13 4 1 - 1.000 - - - - - - -
73. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - - - - 1.000 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
74. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
75. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
76. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
77. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
78. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
79. C6H3orf67 C6H3orf67 1 1 - 1.000 - - - - - - -
80. cobl ENSDARG00000091006 4 1 - 1.000 - - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
81. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
82. CU928217.1 CU928217.1 12 1 - 1.000 - - - - - - -
83. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
84. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
85. CR769772.1 ENSDARG00000092772 0 1 - 1.000 - - - - - - -
86. U6_23 U6_23 0 1 - 1.000 - - - - - - -
87. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
88. CR387932.1 ENSDARG00000097344 2 1 - 1.000 - - - - - - -
89. foxm1 ENSDARG00000003200 8 1 - - - - - - 1.000 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
90. znf536 ENSDARG00000103648 6 1 - - - - - - 1.000 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
91. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - 1.000 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
92. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
93. insl3 ENSDARG00000035862 1 1 - - - - - - 1.000 - - insulin-like 3 (Leydig cell) [Source:ZFIN;Acc:ZDB-GENE-050310-5]
94. barx1 ENSDARG00000007407 344 1 - - - - - - 1.000 - - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
95. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
96. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
97. URB1 ENSDARG00000060308 78 1 - - - - - - 1.000 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
98. si:dkey-10f21.16 si:dkey-10f21.16 252 1 - - - - - - 1.000 - -
99. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
100. FCF1 ENSDARG00000102333 59 1 - - - - - - 1.000 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]

There are 1206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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