Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps9d1

Gene Name Gene ID Reads Annotation
vps9d1 ENSDARG00000019195 582 VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]










Genes with expression patterns similar to vps9d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps9d1 ENSDARG00000019195 582 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
2. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 2.345 0.778 0.810 - - - - 0.757 - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
3. tgfbr2 tgfbr2 1117 2.292 0.797 - - - - 0.744 0.751 - -
4. eps8l1 1598 2.256 0.813 - - - - 0.705 0.738 - - eps8-like1, transcript variant X3
5. impad1 ENSDARG00000058114 667 2.249 0.789 0.710 - - - - 0.750 - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
6. msxc msxc 3142 1.673 - - - - - 0.803 0.870 - -
7. GPR31 431 1.666 - 0.862 - - - - 0.804 - - G protein-coupled receptor 31
8. nudt9 ENSDARG00000087927 1148 1.65 - - - - - 0.822 0.828 - - nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
9. SLC25A24 ENSDARG00000008568 2005 1.647 - - - - - 0.798 0.849 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
10. DACT3 DACT3 766 1.645 - 0.826 - - - 0.819 - - -
11. ptgs2a ENSDARG00000004539 1207 1.636 - - - - - 0.776 0.860 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
12. galnt12 ENSDARG00000055490 1653 1.633 0.873 - - - - - 0.760 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
13. arhgef25b ENSDARG00000014465 669 1.629 0.827 0.802 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
14. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.625 - - - - - 0.853 0.772 - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
15. lgmn ENSDARG00000039150 2788 1.622 0.813 0.809 - - - - - - - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
16. chmp3 ENSDARG00000038064 577 1.61 - 0.864 - - - 0.746 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
17. esrp1 ENSDARG00000011245 2097 1.608 - - - - - 0.761 0.847 - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
18. EMILIN2 EMILIN2 429 1.595 - 0.802 - - - - 0.793 - -
19. AIM1L AIM1L 899 1.592 - 0.774 - - - - 0.818 - -
20. arhgap5 ENSDARG00000061294 2228 1.589 - - - - - 0.772 0.817 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
21. TMEM14A ENSDARG00000095157 611 1.588 0.776 0.812 - - - - - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
22. OMG OMG 1202 1.586 0.812 - - - - - 0.774 - -
23. galnt10 ENSDARG00000103825 320 1.584 0.745 - - - - - 0.839 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
24. rabl3 ENSDARG00000040959 271 1.581 - 0.772 - - - - 0.809 - - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
25. SGPP1 ENSDARG00000060534 1802 1.573 0.837 0.736 - - - - - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
26. cers1 ENSDARG00000063412 590 1.573 - - - - - 0.848 - 0.725 - ceramide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-050208-406]
27. azi2 ENSDARG00000102419 1380 1.567 - 0.800 - - - - 0.767 - - 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
28. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.566 0.863 - - - - - - 0.703 - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
29. ssu72 ENSDARG00000031216 2350 1.565 - 0.850 - - - - 0.715 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
30. frmd8 ENSDARG00000073696 2661 1.561 - 0.831 - - - - 0.730 - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
31. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.56 - 0.840 - - - - 0.720 - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
32. stx2b ENSDARG00000068217 2567 1.56 0.828 0.732 - - - - - - - syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
33. btr12 ENSDARG00000051809 1804 1.56 - - - - - 0.727 0.833 - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
34. st7l ENSDARG00000032603 528 1.557 0.788 0.769 - - - - - - - suppression of tumorigenicity 7 like [Source:ZFIN;Acc:ZDB-GENE-080219-43]
35. bdh1 ENSDARG00000059388 3390 1.557 - 0.709 - - - - 0.848 - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
36. cmah ENSDARG00000057714 852 1.556 0.790 - - - - 0.766 - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
37. gbp1 ENSDARG00000038668 520 1.556 - 0.811 - - 0.745 - - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
38. sqstm1 ENSDARG00000075014 2392 1.554 0.850 - - - - - 0.704 - - sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
39. itgb1b.1 ENSDARG00000053232 4721 1.552 0.773 - - - - - 0.779 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
40. hacl1 ENSDARG00000020529 228 1.549 - - - - - 0.776 0.773 - - 2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]
41. fdps ENSDARG00000040890 4000 1.545 0.719 0.826 - - - - - - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
42. MKL2 MKL2 580 1.545 - 0.808 - - - - 0.737 - -
43. s100u ENSDARG00000071014 4754 1.542 - - - - - 0.793 0.749 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
44. osbpl3a ENSDARG00000033251 477 1.541 - 0.726 - - - 0.815 - - - oxysterol binding protein-like 3a [Source:ZFIN;Acc:ZDB-GENE-040912-77]
45. rragca ENSDARG00000069829, ENSDARG00000110332 1110 1.54 - 0.724 - - - - 0.816 - - Ras-related GTP binding Ca [Source:ZFIN;Acc:ZDB-GENE-050522-355]
46. tpcn2 ENSDARG00000100420 626 1.538 - 0.821 - - - 0.717 - - - two pore segment channel 2 [Source:ZFIN;Acc:ZDB-GENE-061103-202]
47. pmm2 ENSDARG00000037654 1783 1.535 0.776 - - - - - 0.759 - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
48. slc44a2 ENSDARG00000037059 1903 1.531 - 0.797 - - - - 0.734 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
49. prrg4 ENSDARG00000030753 1008 1.529 0.761 0.768 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
50. he2 945 1.522 - - - - - 0.758 0.764 - - hatching enzyme 2
51. PBXIP1 PBXIP1 602 1.519 - 0.780 - - - 0.739 - - -
52. si:ch211-232i5.3 ENSDARG00000086874 1256 1.516 0.739 - - - - - 0.777 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
53. SPG21 ENSDARG00000007760 645 1.516 0.800 0.716 - - - - - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
54. tm9sf4 ENSDARG00000002536 1684 1.514 - 0.722 - - - - 0.792 - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
55. zgc:66427 ENSDARG00000023303, ENSDARG00000114732 1239 1.512 0.778 0.734 - - - - - - - zgc:66427 [Source:ZFIN;Acc:ZDB-GENE-040426-1913]
56. kremen1 ENSDARG00000062579 190 1.51 0.774 - - - - - 0.736 - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
57. g6pca.2 ENSDARG00000013721 2034 1.509 - 0.736 - - - - - 0.773 - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
58. nsrp1 ENSDARG00000015221 1598 1.508 0.786 0.722 - - - - - - - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
59. SCYL2 ENSDARG00000032627 683 1.508 - 0.802 - - - - 0.706 - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
60. qki2 ENSDARG00000010018 2230 1.504 0.715 0.789 - - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
61. spint1a ENSDARG00000102332 1930 1.499 - 0.711 - - - 0.788 - - - serine peptidase inhibitor, Kunitz type 1 a [Source:ZFIN;Acc:ZDB-GENE-040426-2169]
62. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 1.498 - 0.797 - - - - 0.701 - - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
63. LRRC8E LRRC8E 495 1.497 - 0.784 - - - - 0.713 - -
64. elovl7b ENSDARG00000100185 2032 1.496 0.738 - - - - - 0.758 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
65. EPHA2 EPHA2 867 1.496 0.779 - - - - - 0.717 - -
66. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.496 0.744 - - - - - 0.752 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
67. itih5 ENSDARG00000045517 374 1.495 - - - - - 0.746 0.749 - - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
68. f2 ENSDARG00000036041 3129 1.492 - 0.760 - - - - - 0.732 - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
69. gata6 ENSDARG00000103589 746 1.487 - 0.718 - - - - - 0.769 - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
70. agtrap ENSDARG00000077082, ENSDARG00000114680 329 1.487 - 0.755 - - - - 0.732 - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
71. aftpha ENSDARG00000069249 867 1.486 - 0.774 - - - - 0.712 - - aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
72. rab5ab ENSDARG00000007257 1402 1.485 - - - - - 0.743 0.742 - - RAB5A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040122-3]
73. fn1b ENSDARG00000006526 9542 1.483 - 0.752 - - - - 0.731 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
74. sidt2 ENSDARG00000045976 1997 1.482 - 0.714 - - - - - 0.768 - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
75. aldh2.2_1 ENSDARG00000028087 279 1.481 - 0.708 - - - - 0.773 - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
76. suclg2 ENSDARG00000044914 7950 1.48 - - - - - - 0.739 0.741 - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
77. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 1.478 - 0.745 - - - - 0.733 - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
78. zgc:92360 ENSDARG00000038151 2161 1.477 - 0.748 - - - - 0.729 - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
79. TM6SF2 ENSDARG00000029057 1239 1.473 - - 0.715 - - - - 0.758 - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
80. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.472 0.760 - - - - - 0.712 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
81. plg ENSDARG00000023111 2429 1.468 0.727 - - - - - - 0.741 - plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
82. psmg3 ENSDARG00000098391 920 1.467 - 0.756 - - - - 0.711 - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
83. entpd2a.2 ENSDARG00000033953 389 1.462 0.750 - - - - - 0.712 - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
84. st8sia4 ENSDARG00000103600 198 1.459 - 0.739 - - - 0.720 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
85. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.458 0.738 0.720 - - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
86. plekha8 ENSDARG00000040698 431 1.458 - 0.707 - - - - 0.751 - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Source:ZFIN;Acc:ZDB-GENE-041114-69]
87. CPN2 CPN2 682 1.449 - 0.747 - - - - - 0.702 -
88. XPR1 XPR1 3354 1.446 0.735 - 0.711 - - - - - -
89. gfpt2 ENSDARG00000044094 2503 1.436 - 0.716 - - - - 0.720 - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
90. COL28A1_1 COL28A1_1 11434 1.431 - - - - - 0.704 0.727 - -
91. ogn 5002 1.425 - 0.704 - - - 0.721 - - - osteoglycin
92. aqp12 ENSDARG00000043279 1881 1.424 - - - - - - 0.703 0.721 - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
93. mst1 ENSDARG00000103308 581 1.419 - - - - 0.711 - - 0.708 - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
94. BX296557.2 BX296557.2 1083 1.409 0.700 - - - - - 0.709 - -
95. ankrd54 ENSDARG00000055743 1575 1.407 0.701 - - - - - 0.706 - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
96. ensaa ENSDARG00000036944 685 0.944 - 0.944 - - - - - - - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
97. palm3 ENSDARG00000071215 1776 0.932 - - - - - - 0.932 - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
98. duox ENSDARG00000062632 1406 0.932 - - - - - 0.932 - - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
99. zgc:173961 zgc:173961 1540 0.921 - 0.921 - - - - - - -
100. AL929434.1 AL929434.1 3294 0.916 - - - - - - 0.916 - -

There are 1334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA