Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vps53

Gene Name Gene ID Reads Annotation
vps53 ENSDARG00000069324, ENSDARG00000116674 1130 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]










Genes with expression patterns similar to vps53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
2. bcl2l1 ENSDARG00000008434 1956 2.454 0.734 - - - - 0.771 - - 0.949 bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
3. cdk11b ENSDARG00000102546 1579 1.95 - 0.994 - - - - - - 0.956 cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
4. ehd3 ENSDARG00000007869 3238 1.882 - 0.934 - - - - - - 0.948 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
5. si:ch211-218c6.8 ENSDARG00000092364 1270 1.877 0.881 0.996 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
6. pank1b ENSDARG00000010098 3202 1.875 - 0.985 - - - - - - 0.890 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
7. wnt10a ENSDARG00000017155 491 1.875 0.891 - - - - - - - 0.984 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
8. junbb ENSDARG00000104773 2536 1.866 0.878 - - - - - - - 0.988 JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
9. rnf7 ENSDARG00000055524 3390 1.86 - 0.977 - - - - - - 0.883 ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
10. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.859 - 0.954 - - - - - - 0.905 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
11. sp1 ENSDARG00000088347 1697 1.855 - 0.991 - - - 0.864 - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
12. etfa ENSDARG00000101631 2946 1.825 0.867 0.958 - - - - - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
13. C11H19orf25 C11H19orf25 491 1.817 0.831 - - - - - - - 0.986
14. SH3D21 ENSDARG00000099448 1726 1.811 0.824 0.987 - - - - - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
15. USO1 ENSDARG00000019581 1617 1.811 0.830 0.981 - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
16. rerea ENSDARG00000077353 4162 1.81 0.821 0.989 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
17. grp ENSDARG00000043074 747 1.808 0.834 - - - - - - - 0.974 gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
18. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.79 0.841 - - - - - - - 0.949 nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
19. FAM126B 588 1.781 - - - - - 0.798 - - 0.983 family with sequence similarity 126 member B
20. arid1ab ENSDARG00000101891 1722 1.779 - 0.995 - - - 0.784 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
21. otud5a ENSDARG00000059006 2073 1.777 0.854 - - - - - - - 0.923 OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
22. FP102272.1 FP102272.1 9473 1.768 0.834 0.934 - - - - - - -
23. ptgs2a ENSDARG00000004539 1207 1.762 - - - - - 0.838 - - 0.924 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
24. pmepa1 ENSDARG00000039325 652 1.759 - - - - - 0.833 - - 0.926 prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
25. pi4kaa ENSDARG00000076724 1949 1.759 0.792 0.967 - - - - - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
26. AL929204.1 AL929204.1 773 1.744 - 0.996 - - - 0.748 - - -
27. sin3aa ENSDARG00000079716 580 1.742 - - - - - 0.758 - - 0.984 SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
28. BX294110.1 ENSDARG00000096875 1761 1.738 - - - - - 0.784 - - 0.954
29. tox4 tox4 1671 1.735 - 0.998 - - - 0.737 - - -
30. znf592 ENSDARG00000060885 776 1.729 - - - - - 0.771 - - 0.958 zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
31. nob1 ENSDARG00000016080 2483 1.727 - 0.973 - 0.754 - - - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
32. map3k7 ENSDARG00000020469 2845 1.715 0.808 - - - - - - - 0.907 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
33. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 1.709 - 0.993 - - - 0.716 - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
34. nr2f1a ENSDARG00000052695 5037 1.705 - 0.982 - - - 0.723 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
35. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.703 - - - - - 0.773 - - 0.930 mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
36. ptbp2a ENSDARG00000101947 1921 1.7 - - - - - - 0.760 - 0.940 polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
37. psma6a ENSDARG00000019398 2702 1.696 0.716 0.980 - - - - - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
38. ctdsp1 ENSDARG00000040674 2828 1.694 - - - - - 0.765 - - 0.929 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
39. rgs3b ENSDARG00000035132 876 1.692 0.923 - - - - 0.769 - - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
40. dlg1 ENSDARG00000009677 706 1.689 - - - - - 0.707 - - 0.982 discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
41. senp3b ENSDARG00000056741 1296 1.684 - - - - - 0.723 - - 0.961 SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
42. fam155a ENSDARG00000075858 91 1.682 0.850 - - - - 0.832 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
43. AIFM2 ENSDARG00000077549 1419 1.682 - - - - - 0.718 - - 0.964 apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
44. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.681 - - - - - 0.701 - - 0.980 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
45. sh3yl1 ENSDARG00000074393 815 1.681 0.944 - - - - - 0.737 - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
46. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.67 - - - 0.798 - - - - 0.872 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
47. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.668 0.852 - - - - 0.816 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
48. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.66 - - - - - 0.751 - - 0.909 DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
49. cmah ENSDARG00000057714 852 1.658 - - - - - 0.821 - - 0.837 cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
50. creb3l2 ENSDARG00000063563 1284 1.656 - - - - - 0.739 - - 0.917 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
51. actr5 ENSDARG00000098235 237 1.654 0.848 - - - - 0.806 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
52. hsdl2 ENSDARG00000002523 2746 1.652 0.848 - - - - - - - 0.804 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
53. thap4 ENSDARG00000077323 434 1.648 0.890 - - - - 0.758 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
54. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.645 0.702 0.943 - - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
55. si:dkey-178e17.3 ENSDARG00000058658 271 1.638 0.918 - - - - 0.720 - - - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
56. EPS8L2 ENSDARG00000058108 484 1.63 0.890 - - - - - 0.740 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
57. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.628 0.832 - - - - 0.796 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
58. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.627 - 0.910 - - - - - - 0.717 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
59. wnk1b ENSDARG00000039392 3587 1.623 - - - - - 0.708 - - 0.915 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
60. ppih ENSDARG00000041530 2085 1.622 0.708 - - - - - - - 0.914 peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
61. RNF5 ENSDARG00000075606 1730 1.617 0.844 - - - - 0.773 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
62. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.613 0.705 - - - - - - - 0.908 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
63. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 1.609 0.879 - - - - 0.730 - - - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
64. pycr1 pycr1 1258 1.602 0.852 - - - - 0.750 - - -
65. C22H10orf76 C22H10orf76 1103 1.595 - - - 0.763 - 0.832 - - -
66. hspbp1 ENSDARG00000102937 260 1.587 0.803 - - - - 0.784 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
67. rnf11a ENSDARG00000010442 592 1.579 0.828 - - - - 0.751 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
68. cib1 ENSDARG00000103118 291 1.568 0.853 - - - - 0.715 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
69. ube2d1b ENSDARG00000038576 5971 1.561 0.792 - - - - 0.769 - - - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
70. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.559 0.837 - - - - 0.722 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
71. SLC36A4 ENSDARG00000039661 175 1.558 - - - - - 0.790 0.768 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
72. fbrs ENSDARG00000074688 621 1.555 - - - - - 0.763 0.792 - - fibrosin [Source:ZFIN;Acc:ZDB-GENE-111207-1]
73. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.554 0.841 - - - - 0.713 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
74. iah1 ENSDARG00000015765 326 1.547 0.837 - - - - 0.710 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
75. alad ENSDARG00000100372 1711 1.541 0.806 - - - - 0.735 - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
76. arhgef18a ENSDARG00000011157 1702 1.537 0.822 - - - - - 0.715 - - rho/rac guanine nucleotide exchange factor (GEF) 18a [Source:ZFIN;Acc:ZDB-GENE-040516-14]
77. CASKIN2_1 CASKIN2_1 2299 1.537 0.787 - - 0.750 - - - - -
78. ube2f ENSDARG00000025754 1946 1.533 0.801 - - - - 0.732 - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
79. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 1.533 - - - - - 0.799 0.734 - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
80. kdm4b ENSDARG00000099675 2037 1.527 0.755 - - - - 0.772 - - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
81. RBM6 ENSDARG00000077060 3521 1.526 0.819 - - - - - - 0.707 - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
82. glipr2l ENSDARG00000016837 440 1.508 0.739 - - - - 0.769 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
83. gpsm1b ENSDARG00000054874 1308 1.502 - - - - - 0.799 - - 0.703 G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
84. sh3gl1a ENSDARG00000067958 1105 1.496 - - - - - 0.779 0.717 - - SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
85. chmp3 ENSDARG00000038064 577 1.492 0.786 - - - - 0.706 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
86. gtpbp10 ENSDARG00000040300 533 1.489 - - - - - 0.748 0.741 - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
87. her15.2 her15.2 1701 1.464 0.707 - - - - 0.757 - - -
88. CASK CASK 1750 1.458 - - - - - 0.707 0.751 - -
89. crabp1b ENSDARG00000035904 2753 1.449 - - - 0.731 - 0.718 - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
90. cdc34a ENSDARG00000069708 1145 1.447 - - - 0.742 - - - 0.705 - cell division cycle 34 homolog (S. cerevisiae) a [Source:ZFIN;Acc:ZDB-GENE-040426-713]
91. dhrs3b ENSDARG00000044803 2931 1.445 0.725 - - - - 0.720 - - - dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
92. marveld3 ENSDARG00000099654 113 1.444 - - - - - 0.702 0.742 - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
93. gga3 ENSDARG00000103667 675 1.414 - - - - - 0.702 0.712 - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
94. mxra7 ENSDARG00000095300 332 0.998 - 0.998 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
95. cnot3b ENSDARG00000019842 838 0.998 - 0.998 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
96. ubn2 ubn2 534 0.998 - 0.998 - - - - - - -
97. scn3b ENSDARG00000062359 242 0.998 - 0.998 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
98. dhrs9 ENSDARG00000019260 250 0.998 - 0.998 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
99. ptk6a ENSDARG00000017947 682 0.998 - 0.998 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
100. mis18a ENSDARG00000035333 555 0.998 - 0.998 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]

There are 1752 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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