Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps4a

Gene Name Gene ID Reads Annotation
vps4a ENSDARG00000030114 933 vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]










Genes with expression patterns similar to vps4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps4a ENSDARG00000030114 933 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]
2. zgc:55733 ENSDARG00000103845 1550 1.868 0.990 - - - - - 0.878 - - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
3. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.788 0.989 0.799 - - - - - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
4. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.745 0.964 - - - - - 0.781 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
5. dcaf7 ENSDARG00000054355 3517 1.721 0.984 - - - - - 0.737 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
6. usp4 ENSDARG00000014770 1684 1.72 0.990 - - - - - 0.730 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
7. mapk3 ENSDARG00000070573 6842 1.712 0.899 0.813 - - - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
8. ctbp2 ctbp2 3255 1.711 0.924 - - - - - 0.787 - -
9. col27a1a 1747 1.694 0.977 0.717 - - - - - - - collagen, type XXVII, alpha 1a
10. ube2i ube2i 13024 1.667 0.877 - - - - - 0.790 - -
11. mybphb ENSDARG00000003081 5208 1.64 0.930 - - - - - 0.710 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
12. ube2e1 ENSDARG00000116649 10656 1.633 0.932 0.701 - - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
13. pfdn4 ENSDARG00000061228 8266 1.626 0.908 - - - - - 0.718 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
14. meaf6 ENSDARG00000101216 6865 1.609 - 0.846 - - - - 0.763 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
15. pak2b ENSDARG00000018476 4331 1.608 - 0.787 - - - - 0.821 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
16. dctn3 ENSDARG00000041363 3351 1.578 - 0.842 - - - - 0.736 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
17. smg5 ENSDARG00000041481 1286 1.57 - 0.709 - - - - 0.861 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
18. pcdh19 ENSDARG00000034344 2378 1.562 - 0.810 - - - - 0.752 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
19. actr1 ENSDARG00000011611 3879 1.559 - 0.739 - - - - 0.820 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
20. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 1.543 - 0.826 - - - 0.717 - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
21. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 1.539 - 0.819 - - - - 0.720 - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
22. rbm25 rbm25 3629 1.517 - 0.728 - - - - 0.789 - -
23. foxo3b ENSDARG00000042904 5046 1.509 - 0.712 - - - - 0.797 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
24. MICU3 MICU3 231 1.507 - - - - - 0.774 0.733 - -
25. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.506 - 0.742 - - - - 0.764 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
26. dnmbp ENSDARG00000074121 2711 1.5 - 0.779 - - - 0.721 - - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
27. dhx16 ENSDARG00000013150 436 1.494 - 0.774 - - - - 0.720 - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:ZFIN;Acc:ZDB-GENE-030131-8589]
28. rhoub ENSDARG00000012968 1143 1.484 - 0.738 - - - - 0.746 - - ras homolog family member Ub [Source:ZFIN;Acc:ZDB-GENE-050417-308]
29. marcksa ENSDARG00000004049 2518 1.474 - 0.762 - - - - 0.712 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
30. cdv3 ENSDARG00000023028 12380 1.473 0.747 - - - - - 0.726 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
31. MAPRE2 ENSDARG00000099943 3041 1.462 - - 0.705 - - - 0.757 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
32. prnprs3 ENSDARG00000003705 1854 1.46 - 0.711 - - - - 0.749 - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
33. ogfr ENSDARG00000037837 1001 1.458 - - - - - 0.704 0.754 - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
34. cct8 ENSDARG00000008243 6843 1.443 - 0.711 - - - - 0.732 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
35. hadhb ENSDARG00000102055 9700 1.443 - 0.710 - - - - 0.733 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
36. tpst1l ENSDARG00000044513 1339 1.437 - 0.716 - - - - 0.721 - - tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
37. scoca ENSDARG00000087333 1739 1.429 - - - - - 0.704 0.725 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
38. prkacaa ENSDARG00000100349 2711 1.426 - 0.718 - - - - 0.708 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
39. CCDC71 CCDC71 2442 1.425 - 0.704 - - - - 0.721 - -
40. med20 ENSDARG00000046006 614 1.424 - - 0.709 - - - 0.715 - - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
41. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.417 - 0.702 - - - - 0.715 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
42. usp2a ENSDARG00000020107 2586 1.41 - - - - - 0.700 0.710 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
43. tfcp2 ENSDARG00000060306 1024 0.997 0.997 - - - - - - - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
44. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 0.997 0.997 - - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
45. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 0.996 0.996 - - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
46. pfkfb3 ENSDARG00000001953 656 0.996 0.996 - - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
47. cab39 ENSDARG00000043451 1326 0.996 0.996 - - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
48. HOMEZ HOMEZ 1824 0.996 0.996 - - - - - - - -
49. MRAS_1 ENSDARG00000075285 318 0.996 0.996 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
50. sos1 ENSDARG00000100503 388 0.996 0.996 - - - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
51. zrsr2 ENSDARG00000058448 335 0.996 0.996 - - - - - - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
52. wdtc1 ENSDARG00000059760 1218 0.996 0.996 - - - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
53. si:dkey-10f21.16 si:dkey-10f21.16 252 0.996 0.996 - - - - - - - -
54. IRF2 ENSDARG00000040465 453 0.996 0.996 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
55. ppcs ENSDARG00000061889 224 0.996 0.996 - - - - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
56. b4galnt3b ENSDARG00000058939 413 0.996 0.996 - - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8615]
57. poll ENSDARG00000039613 395 0.996 0.996 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]
58. TOM1L2 ENSDARG00000056394 793 0.996 0.996 - - - - - - - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
59. ENSDARG00000090222 ENSDARG00000090222 402 0.996 0.996 - - - - - - - -
60. TTC9 ENSDARG00000074363 196 0.996 0.996 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
61. si:ch211-71m22.1 ENSDARG00000058638 169 0.996 0.996 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
62. ENSDARG00000076021 ENSDARG00000076021 162 0.996 0.996 - - - - - - - -
63. MYADML2 ENSDARG00000053953 810 0.996 0.996 - - - - - - - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
64. ttc27 ENSDARG00000007918 1228 0.996 0.996 - - - - - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
65. SLC6A16_1 SLC6A16_1 1130 0.995 0.995 - - - - - - - -
66. arhgef12b ENSDARG00000100913 1358 0.995 0.995 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
67. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.995 0.995 - - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
68. FAM210A FAM210A 437 0.995 0.995 - - - - - - - -
69. tbc1d19 ENSDARG00000013842 253 0.995 0.995 - - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
70. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.995 0.995 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
71. nab1b ENSDARG00000040700 289 0.995 0.995 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
72. cx43 ENSDARG00000041799 2212 0.995 0.995 - - - - - - - - connexin 43 [Source:ZFIN;Acc:ZDB-GENE-991105-4]
73. tet2 ENSDARG00000076928 2190 0.995 0.995 - - - - - - - - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
74. wu:fj13e08 1223 0.995 0.995 - - - - - - - - wu:fj13e08
75. selj 884 0.995 0.995 - - - - - - - - selenoprotein J
76. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 0.994 0.994 - - - - - - - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
77. BAHD1 ENSDARG00000086789 1194 0.994 0.994 - - - - - - - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
78. mboat2a ENSDARG00000031845 1255 0.994 0.994 - - - - - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
79. evi5b ENSDARG00000070839 239 0.994 0.994 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
80. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.994 0.994 - - - - - - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
81. PDCL3 ENSDARG00000100651 164 0.994 0.994 - - - - - - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
82. armc8 ENSDARG00000062258, ENSDARG00000110157 467 0.994 0.994 - - - - - - - - armadillo repeat containing 8 [Source:ZFIN;Acc:ZDB-GENE-061027-88]
83. aacs ENSDARG00000012468 1138 0.994 0.994 - - - - - - - - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
84. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 0.994 0.994 - - - - - - - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
85. ahcyl2 ENSDARG00000039343 1210 0.994 0.994 - - - - - - - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
86. zgc:66448 ENSDARG00000022952 1045 0.994 0.994 - - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
87. col6a1 ENSDARG00000074908 2339 0.993 0.993 - - - - - - - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
88. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 0.993 0.993 - - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
89. itsn1 ENSDARG00000000086 684 0.993 0.993 - - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
90. fam192a ENSDARG00000041631 4113 0.993 0.993 - - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
91. ugt5a5 807 0.993 0.993 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide A5
92. mier1b ENSDARG00000001447 1680 0.993 0.993 - - - - - - - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
93. ext2 ENSDARG00000056648 1322 0.993 0.993 - - - - - - - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
94. snx15 ENSDARG00000020397, ENSDARG00000110059 491 0.993 0.993 - - - - - - - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
95. GIT1 ENSDARG00000039489 1157 0.993 0.993 - - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
96. tbc1d12b ENSDARG00000073771 787 0.992 0.992 - - - - - - - - TBC1 domain family, member 12b [Source:ZFIN;Acc:ZDB-GENE-121214-108]
97. timm10b ENSDARG00000043898 1233 0.992 0.992 - - - - - - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
98. cp ENSDARG00000010312 1245 0.992 0.992 - - - - - - - - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
99. mark3 mark3 1375 0.992 0.992 - - - - - - - -
100. sec23ip ENSDARG00000061413 804 0.992 0.992 - - - - - - - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]

There are 833 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA