Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps41

Gene Name Gene ID Reads Annotation
vps41 ENSDARG00000063573 581 vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6671]










Genes with expression patterns similar to vps41

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps41 ENSDARG00000063573 581 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6671]
2. C18H11orf58 C18H11orf58 1293 1.783 - - - - - 0.868 - 0.915 -
3. CT573103.1 ENSDARG00000097550 950 1.583 - 0.732 - - - - - 0.851 -
4. EPS8L2 ENSDARG00000058108 484 1.548 - - - - - - 0.753 0.795 - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
5. bhlhe41 ENSDARG00000041691, ENSDARG00000112123, ENSDARG00000114358 302 1.514 - - - - - 0.782 0.732 - - basic helix-loop-helix family, member e41 [Source:ZFIN;Acc:ZDB-GENE-050419-146]
6. ythdf1 ENSDARG00000016447 3391 1.512 0.751 - - - - - - 0.761 - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
7. ppp1r11 ENSDARG00000036063 587 1.51 - - - - - 0.707 - 0.803 - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
8. ERO1LB ERO1LB 1433 1.508 - - - - - - 0.702 0.806 -
9. rock1 ENSDARG00000058993 2603 1.495 - - - - - 0.770 0.725 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
10. stag1b ENSDARG00000062137 1814 1.46 - - - - - 0.737 - 0.723 - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
11. bod1 ENSDARG00000103922 1126 1.446 - - - - - 0.732 - 0.714 - biorientation of chromosomes in cell division 1 [Source:ZFIN;Acc:ZDB-GENE-060810-163]
12. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1.441 - - - - - - 0.724 0.717 - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
13. gatsl2 1618 1.41 0.705 0.705 - - - - - - - GATS protein-like 2
14. si:ch73-387e10.3 si:ch73-387e10.3 517 0.916 - - - - - - - 0.916 -
15. pex16 ENSDARG00000058202 486 0.904 - - - - - - - 0.904 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
16. C20H1orf112 C20H1orf112 316 0.898 - - - - - - - 0.898 -
17. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.897 - - - - - - - 0.897 - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
18. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 0.89 - - - - - - - 0.890 - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
19. trappc3 ENSDARG00000045364 1021 0.889 - - - - - - - 0.889 - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
20. kctd13 ENSDARG00000044769, ENSDARG00000112000 569 0.888 0.888 - - - - - - - - potassium channel tetramerization domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060825-162]
21. rhbdd2 ENSDARG00000092463 937 0.888 - - - - - - - 0.888 - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
22. gtdc2 gtdc2 523 0.886 - - - - - - - 0.886 -
23. slc44a5b ENSDARG00000057419 534 0.886 - - - - - - - 0.886 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
24. b3galtla b3galtla 111 0.886 - - - - - - - 0.886 -
25. adora1 adora1 149 0.883 - - - - - - - 0.883 -
26. dclk1a ENSDARG00000018856 177 0.882 - - - - - - - 0.882 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
27. orc6 ENSDARG00000075682 1382 0.882 - - - - - - - 0.882 - origin recognition complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2976]
28. ncoa6 ENSDARG00000071272 759 0.879 - - - - - - - 0.879 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
29. mea1 ENSDARG00000039820 589 0.879 - - - - - - - 0.879 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
30. zgc:174877 ENSDARG00000079278 143 0.879 - - - - - - - 0.879 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
31. NHSL2 ENSDARG00000089066 374 0.878 - - - - - - - 0.878 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
32. CABZ01080599.2 CABZ01080599.2 192 0.877 - - - - - - - 0.877 -
33. mcmbp ENSDARG00000055314 731 0.876 - - - - - - - 0.876 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
34. gna13b ENSDARG00000037924 1963 0.876 - - - - - - - 0.876 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
35. HYKK HYKK 261 0.875 - - - - - - - 0.875 -
36. setd1a ENSDARG00000060030 874 0.875 - - - - - - - 0.875 - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
37. SHANK1 ENSDARG00000060539 102 0.875 - - - - - - - 0.875 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
38. znf362 znf362 869 0.874 - - - - - - - 0.874 -
39. nrxn2b ENSDARG00000063150 343 0.873 - - - - - - - 0.873 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
40. reep3l reep3l 608 0.873 - - - - - - - 0.873 -
41. ZNF70_11 ZNF70_11 1246 0.872 - - - - - - - 0.872 -
42. CABZ01045230.1 CABZ01045230.1 158 0.872 - - - - - - - 0.872 -
43. si:dkey-157e10.7 si:dkey-157e10.7 105 0.871 - - - - - - - 0.871 -
44. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.871 - - - - - - - 0.871 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
45. slc6a6a ENSDARG00000012534 183 0.87 - - - - - - - 0.870 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
46. BX511021.1 ENSDARG00000073936 647 0.87 - - - - - - - 0.870 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
47. C8H17orf59 C8H17orf59 494 0.869 - - - - - - - 0.869 -
48. si:dkey-17e6.2 si:dkey-17e6.2 72 0.868 - - - - - - - 0.868 -
49. pik3c3 ENSDARG00000054829 559 0.867 - - - - - - - 0.867 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
50. TCAIM ENSDARG00000079881 424 0.865 - - - - - - - 0.865 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
51. si:dkey-114c15.7 237 0.865 - - - - - - - 0.865 - si:dkey-114c15.7
52. akt2 ENSDARG00000011219 647 0.865 - - - - - - - 0.865 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
53. syne1a ENSDARG00000009499, ENSDARG00000116204 601 0.865 - - - - - - - 0.865 - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
54. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.864 - - - - - - - 0.864 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
55. ctdspla ENSDARG00000071673 1447 0.864 - - - - - - - 0.864 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
56. ctps1a ENSDARG00000030700 3868 0.864 - - - - - - - 0.864 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
57. TTF1_4 TTF1_4 504 0.863 - - - - - - - 0.863 -
58. usp4 ENSDARG00000014770 1684 0.863 - - - - - - - 0.863 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
59. p2rx3b ENSDARG00000029718 105 0.862 - - - - - - - 0.862 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
60. mfap1 ENSDARG00000018241 833 0.862 - 0.862 - - - - - - - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
61. per3 ENSDARG00000010519 331 0.862 - - - - - - - 0.862 - period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]
62. ALPK1 195 0.862 - - - - - - - 0.862 - alpha-kinase 1
63. ANGPT4 ENSDARG00000076787 140 0.861 - - - - - - - 0.861 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
64. nrp2b ENSDARG00000038446 783 0.86 - - - - - - - 0.860 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
65. rgp1 ENSDARG00000006545 790 0.86 - - - - - - - 0.860 - GP1 homolog, RAB6A GEF complex partner 1 [Source:ZFIN;Acc:ZDB-GENE-040718-352]
66. prkag3b ENSDARG00000000369 1945 0.86 - - - - - - - 0.860 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
67. ankdd1b ENSDARG00000025866 51 0.859 - - - - - - - 0.859 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
68. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.859 - - - - - - - 0.859 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
69. CR381544.1 ENSDARG00000088187 821 0.859 - - - - - - - 0.859 -
70. MAP7 MAP7 98 0.858 - - - - - - - 0.858 -
71. aatkb ENSDARG00000104442 392 0.858 - - - - - - - 0.858 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
72. git2a ENSDARG00000061915 884 0.858 - - - - - - - 0.858 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
73. tarsl2 ENSDARG00000092774 505 0.857 - - - - - - - 0.857 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
74. hccs hccs 1758 0.857 - - - - - - - 0.857 -
75. RBM26 ENSDARG00000104130 1012 0.857 - - - - - - - 0.857 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
76. timm10 ENSDARG00000069116 4459 0.857 - - - - - - - 0.857 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
77. spef2 ENSDARG00000098330 59 0.856 - - - - - - - 0.856 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
78. SRPK2 446 0.856 - - - - - - - 0.856 - SRSF protein kinase 2, transcript variant X4
79. ddx56 ENSDARG00000020913 1070 0.856 - - - - - - - 0.856 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
80. rpgra ENSDARG00000056617 77 0.855 - - - - - - - 0.855 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
81. reep1 ENSDARG00000014854 915 0.855 - - - - - - - 0.855 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
82. dachd ENSDARG00000069440 271 0.855 - - - - - - - 0.855 - dachshund d [Source:ZFIN;Acc:ZDB-GENE-070427-2]
83. commd1 ENSDARG00000031203 340 0.855 - - - - - - - 0.855 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
84. mir130b 180 0.854 - - - - - - - 0.854 - microRNA 130b
85. hn1a hn1a 115 0.854 - - - - - - - 0.854 -
86. si:dkey-253d23.2 ENSDARG00000071589 143 0.854 - - - - - - - 0.854 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
87. CIT CIT 212 0.854 - - - - - - - 0.854 -
88. BX005410.2 BX005410.2 44 0.854 - - - - - - - 0.854 -
89. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.854 - - - - - - - 0.854 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
90. IKZF4 ENSDARG00000037068 36 0.853 - - - - - - - 0.853 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
91. nrg2a ENSDARG00000077818 854 0.853 - - - - - - - 0.853 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
92. si:dkey-100h21.2 si:dkey-100h21.2 30 0.852 - - - - - - - 0.852 -
93. zgc:174688 zgc:174688 170 0.852 - - - - - - - 0.852 -
94. adcyap1a ENSDARG00000004015 67 0.852 - - - - - - - 0.852 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
95. jam3a ENSDARG00000114589 630 0.852 - - - - - - - 0.852 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
96. si:ch73-167f18.3 si:ch73-167f18.3 78 0.852 - - - - - - - 0.852 -
97. fan1 ENSDARG00000062269, ENSDARG00000109787, ENSDARG00000116777 585 0.852 - - - - - - - 0.852 - FANCD2 and FANCI associated nuclease 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6225]
98. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.852 - - - - - - - 0.852 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
99. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.852 - - - - - - - 0.852 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
100. pde6b ENSDARG00000011671 44 0.852 - - - - - - - 0.852 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]

There are 573 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA