Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps28

Gene Name Gene ID Reads Annotation
vps28 ENSDARG00000103203 4991 vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]










Genes with expression patterns similar to vps28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps28 ENSDARG00000103203 4991 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
2. csrp1a ENSDARG00000006603 5188 1.888 - - - - - 0.949 - - 0.939 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
3. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.81 - 0.886 - - - - - - 0.924 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
4. mpv17 ENSDARG00000032431 1225 1.779 - 0.864 - - - - - - 0.915 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
5. b4galt1 ENSDARG00000002634 1076 1.778 - 0.830 - - - 0.948 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
6. pnp5a ENSDARG00000078619 1461 1.764 - 0.879 - - - - - - 0.885 purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
7. gorasp1 gorasp1 3075 1.763 - - - - - - 0.828 - 0.935
8. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 1.754 - 0.813 - - - 0.941 - - - diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
9. XPR1 XPR1 3354 1.75 - 0.836 - - - - - - 0.914
10. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 1.745 - 0.797 - - - 0.948 - - -
11. gmds ENSDARG00000026629 3976 1.742 - - - - - 0.967 - - 0.775 GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
12. PLCL2 ENSDARG00000098826 596 1.736 - 0.787 - - - 0.949 - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
13. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 1.722 - - - - - - 0.791 - 0.931 hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
14. golgb1 ENSDARG00000061951 2023 1.717 - 0.809 - - - - - - 0.908 golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
15. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.707 - 0.776 - - - - - - 0.931 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
16. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.707 - - - - - 0.963 - - 0.744 cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
17. sec61b ENSDARG00000076568 11859 1.706 - - - - - - 0.879 - 0.827 Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
18. pls3 ENSDARG00000037655 5175 1.701 - - - - - 0.977 0.724 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
19. CPAMD8 ENSDARG00000056530 3481 1.7 - 0.799 - - - - - - 0.901 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
20. tmem258 ENSDARG00000078785 9578 1.698 - 0.785 - - - - - - 0.913 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
21. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.696 - - - - - 0.976 0.720 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
22. FBXO33 ENSDARG00000075400 1164 1.693 - 0.767 - - - - - - 0.926 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
23. atp1a1a.1 ENSDARG00000002791 7392 1.688 - 0.738 - - - 0.950 - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]
24. pcl pcl 2862 1.686 0.803 - - - - - - - 0.883
25. tkt tkt 7203 1.678 - 0.788 - - - 0.890 - - -
26. OTTDARG00000032278 OTTDARG00000032278 1016 1.677 - 0.749 - - - - - - 0.928
27. mgst3 mgst3 3982 1.676 - 0.814 - - - - 0.862 - -
28. PPAP2A PPAP2A 2409 1.673 - - - - - 0.946 0.727 - -
29. xbp1 ENSDARG00000035622 18416 1.668 - - - - - 0.892 0.776 - - X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
30. PIK3CA_1 PIK3CA_1 4065 1.655 - - - 0.703 - 0.952 - - -
31. pafah1b1a ENSDARG00000032013 3183 1.653 - - - - - 0.943 0.710 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
32. sppl2 ENSDARG00000030448 1040 1.649 - 0.739 - - - - - - 0.910 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
33. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.648 - 0.744 - - - - - - 0.904 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
34. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.648 - 0.701 - - - 0.947 - - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
35. lmo7a ENSDARG00000004930 2414 1.644 - - - - - - 0.727 - 0.917 LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
36. erf ENSDARG00000063417 1053 1.637 - 0.729 - - - - - - 0.908 Ets2 repressor factor [Source:ZFIN;Acc:ZDB-GENE-010724-17]
37. nedd8 ENSDARG00000007989 3896 1.635 - 0.711 - - - - - - 0.924 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
38. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.635 - - - - - - 0.714 - 0.921 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
39. gspt1l ENSDARG00000098627 8381 1.631 - 0.709 - - - - 0.922 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
40. sec31b ENSDARG00000002916 1792 1.627 - - - - - - 0.701 - 0.926 SEC31 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-060418-2]
41. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.625 - 0.846 - - - - 0.779 - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
42. cops2 ENSDARG00000004785 4911 1.618 - - - - - - 0.730 - 0.888 COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
43. b3gnt2b ENSDARG00000091902 4125 1.604 - - - - - - 0.716 - 0.888 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
44. im:7150988 ENSDARG00000109310 28520 1.604 - - - - - 0.902 - - 0.702 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
45. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.597 - 0.764 - - - - - - 0.833 tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
46. coro7 ENSDARG00000089616 2141 1.591 - 0.829 - - - - 0.762 - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
47. plcd1b ENSDARG00000034080 4074 1.575 - - - - - - 0.706 - 0.869 phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
48. stam2 ENSDARG00000005318 2980 1.568 - 0.756 - - - - 0.812 - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
49. atic ENSDARG00000016706 6032 1.568 - 0.721 - - - 0.847 - - - 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
50. adam10a ENSDARG00000053468 9308 1.566 - 0.841 - - - - 0.725 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
51. lims1 ENSDARG00000026985 2072 1.556 - - - - - - 0.788 - 0.768 LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
52. si:ch211-217k17.9 ENSDARG00000093494 3452 1.554 - 0.744 - - - - - - 0.810 si:ch211-217k17.9 [Source:ZFIN;Acc:ZDB-GENE-061207-21]
53. flot2a ENSDARG00000004830 5276 1.549 - - - - - - 0.727 - 0.822 flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
54. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.532 - 0.715 - - - - 0.817 - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
55. spcs1 ENSDARG00000059298 5327 1.532 - 0.757 - - - - 0.775 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
56. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.506 - 0.741 - - - - 0.765 - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
57. ttc13 ENSDARG00000063242 1360 1.503 - 0.772 - - - - 0.731 - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
58. pxn_1 pxn_1 3991 1.502 - 0.702 - - - - - - 0.800
59. oxsr1a ENSDARG00000034189 4314 1.499 - 0.728 - - - - 0.771 - - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
60. myh9a ENSDARG00000063295 27935 1.488 - 0.763 - - - - - - 0.725 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
61. cog7 ENSDARG00000061372 789 1.486 - 0.772 - - - - 0.714 - - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
62. ZNF281 ZNF281 1946 1.484 - 0.763 - - - - - - 0.721
63. ddi2 ENSDARG00000006477 4190 1.473 - 0.753 - - - - 0.720 - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
64. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.452 - 0.700 - - - - 0.752 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
65. lepr ENSDARG00000070961, ENSDARG00000112744, ENSDARG00000114564 1014 1.444 - 0.716 - - - - 0.728 - - leptin receptor [Source:ZFIN;Acc:ZDB-GENE-080104-1]
66. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.439 - - - - - - 0.737 - 0.702 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
67. bnip3lb ENSDARG00000028067 1029 1.427 - 0.704 - - - - 0.723 - - BCL2 interacting protein 3 like b [Source:ZFIN;Acc:ZDB-GENE-040325-1]
68. timm8b ENSDARG00000055708 7291 0.977 - - - - - 0.977 - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
69. selt2 12741 0.975 - - - - - 0.975 - - - selenoprotein T, 2
70. kera ENSDARG00000056938 2434 0.974 - - - - - 0.974 - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
71. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 0.973 - - - - - 0.973 - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
72. Sep-06 Sep-06 5465 0.967 - - - - - 0.967 - - -
73. msrb1b ENSDARG00000045160, ENSDARG00000062442, ENSDARG00000115408 1682 0.967 - - - - - 0.967 - - - methionine sulfoxide reductase B1b [Source:ZFIN;Acc:ZDB-GENE-040912-88]
74. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 0.967 - - - - - 0.967 - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
75. CCDC86 CCDC86 2023 0.967 - - - - - 0.967 - - -
76. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.966 - - - - - 0.966 - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
77. si:dkey-17e16.17 615 0.966 - - - - - 0.966 - - - si:dkey-17e16.17
78. rnf183 ENSDARG00000068851 2427 0.966 - - - - - 0.966 - - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
79. BX897684.1 BX897684.1 636 0.965 - - - - - 0.965 - - -
80. ccnd2a ENSDARG00000051748 2506 0.964 - - - - - 0.964 - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
81. farsa ENSDARG00000098825 2813 0.964 - - - - - 0.964 - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
82. kpna2 ENSDARG00000038066 7954 0.963 - - - - - 0.963 - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
83. irx3a ENSDARG00000101076 3106 0.963 - - - - - 0.963 - - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
84. trappc1 ENSDARG00000039005 6990 0.959 - - - - - 0.959 - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
85. HOMER2 ENSDARG00000059349 2264 0.959 - - - - - 0.959 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
86. ube2a ENSDARG00000098466 12765 0.958 - - - - - 0.958 - - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
87. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.957 - - - - - 0.957 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
88. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.956 - - - - - 0.956 - - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
89. zgc:195001 ENSDARG00000070484 3281 0.955 - - - - - 0.955 - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
90. clvs2 ENSDARG00000053122 1390 0.954 - - - - - 0.954 - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
91. PCBP4 ENSDARG00000024276 3194 0.953 - - - - - 0.953 - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
92. acvr1b acvr1b 2963 0.953 - - - - - 0.953 - - -
93. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.953 - - - - - 0.953 - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
94. ddx6 ENSDARG00000061338 2514 0.953 - - - - - 0.953 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
95. plekhh1 ENSDARG00000053835 2123 0.952 - - - - - 0.952 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
96. psmb7 ENSDARG00000037962 11542 0.952 - - - - - 0.952 - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
97. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.952 - - - - - 0.952 - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
98. trappc5 ENSDARG00000026068 1350 0.951 - - - - - 0.951 - - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
99. acaa1 ENSDARG00000004687 557 0.951 - - - - - 0.951 - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
100. l2hgdh ENSDARG00000060500 713 0.951 - - - - - 0.951 - - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]

There are 1108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA