Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps25

Gene Name Gene ID Reads Annotation
vps25 ENSDARG00000059079 3747 vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]










Genes with expression patterns similar to vps25

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps25 ENSDARG00000059079 3747 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
2. trpc4apa ENSDARG00000018840 2543 3.283 - 0.829 - - 0.971 - 0.748 0.735 - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
3. dse ENSDARG00000017988 2169 2.497 0.878 0.827 - - - - 0.792 - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
4. zgc:110333 ENSDARG00000040628 3250 2.376 0.790 0.792 - - - - 0.794 - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
5. s100v1 ENSDARG00000070427 6633 2.368 - - - - 0.940 0.711 0.717 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
6. spcs1 ENSDARG00000059298 5327 2.304 - - 0.704 - - 0.747 0.853 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
7. yif1a ENSDARG00000019636 2215 2.243 0.756 - - - - 0.765 0.722 - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
8. cdk2ap2 ENSDARG00000103145 8024 1.841 - 0.956 - - - - 0.885 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
9. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.809 - 0.831 - - 0.978 - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
10. tet3 ENSDARG00000062646 6672 1.774 - - - - 0.931 - 0.843 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
11. rfc5 ENSDARG00000035634 974 1.748 - - - - 0.972 - 0.776 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
12. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.735 - 0.814 - - 0.921 - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
13. cebpg ENSDARG00000036073 3791 1.73 - - - - 0.963 0.767 - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
14. wsb1 ENSDARG00000021343 3828 1.721 - - - - 0.927 - 0.794 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
15. snrpe ENSDARG00000033175 7462 1.715 - - - - 0.970 - 0.745 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
16. emc3 ENSDARG00000020607 3406 1.713 - - - - - 0.807 0.906 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
17. arpc1a ENSDARG00000008383 7353 1.709 - - - - 0.966 - 0.743 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
18. galnt7 ENSDARG00000057303 2017 1.706 - - - - 0.973 0.733 - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
19. smim7 ENSDARG00000074848 1260 1.706 - - - - 0.969 - 0.737 - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
20. vgll4b ENSDARG00000103730 5266 1.701 - - - - 0.938 - 0.763 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
21. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.697 - 0.778 - - 0.919 - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
22. glrx ENSDARG00000028106 16225 1.694 - 0.909 - - - - 0.785 - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
23. Sep-02 Sep-02 10074 1.693 - - - - 0.919 - 0.774 - -
24. CU655970.1 CU655970.1 2123 1.693 - 0.852 - - - - 0.841 - -
25. ppp1cab ENSDARG00000071566 4350 1.69 - - - - 0.960 - 0.730 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
26. GPA33 2465 1.685 - - - - 0.963 0.722 - - - glycoprotein A33 (transmembrane)
27. prrc1 ENSDARG00000044304 1567 1.683 - 0.832 - - - - 0.851 - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
28. SLC12A6 SLC12A6 883 1.68 - 0.840 - - - - 0.840 - -
29. fkbp3 ENSDARG00000098059 5428 1.672 - - - - 0.936 - 0.736 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
30. smek1 ENSDARG00000042187 3509 1.671 - - - - 0.957 - 0.714 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
31. cnn2 ENSDARG00000035858 18201 1.664 - 0.923 - - - - 0.741 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
32. ywhaz ENSDARG00000032575 15257 1.658 - 0.790 - - - - 0.868 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
33. gle1 ENSDARG00000043559 1362 1.658 - 0.841 - - - - 0.817 - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
34. CABZ01057907.1 CABZ01057907.1 1140 1.652 - 0.845 - - - - 0.807 - -
35. CABZ01103862.1 ENSDARG00000109235 3223 1.648 - 0.809 - - - - 0.839 - -
36. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.64 - - - - 0.933 - 0.707 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
37. gng5 ENSDARG00000039830 12102 1.639 - 0.719 - - - - 0.920 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
38. CU928070.1 CU928070.1 1152 1.637 - 0.836 - - - - 0.801 - -
39. ostc ENSDARG00000104901 16240 1.631 - - - - 0.803 0.828 - - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
40. cpsf3 ENSDARG00000027649 6897 1.63 - - - - 0.914 - 0.716 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
41. lpar2b ENSDARG00000042561 1086 1.628 - 0.847 - - - - 0.781 - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
42. tbc1d17 ENSDARG00000005927 1769 1.625 - 0.816 - - - - 0.809 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
43. rtn3_1 ENSDARG00000091348 3290 1.624 - 0.825 - - - - 0.799 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
44. gmps ENSDARG00000079848 8217 1.624 - 0.795 - - 0.829 - - - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
45. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.623 - 0.850 - - - - 0.773 - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
46. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.617 0.910 - - - - - 0.707 - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
47. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.612 - 0.818 - - - - 0.794 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
48. hccs hccs 1758 1.611 - 0.835 - 0.776 - - - - -
49. fam49ba ENSDARG00000020929 1980 1.61 - - - - - 0.815 0.795 - - family with sequence similarity 49, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]
50. arhgef1b ENSDARG00000055837 2330 1.607 - 0.796 - - - - 0.811 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
51. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.607 0.800 - - - - 0.807 - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
52. lman2lb ENSDARG00000088663 1641 1.606 - 0.832 - - - - 0.774 - - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
53. anapc16 ENSDARG00000013822 5857 1.605 - 0.833 - - - - 0.772 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
54. zgc:56493 ENSDARG00000031435 33407 1.598 - - - - - 0.801 0.797 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
55. bag6 ENSDARG00000075892 3782 1.597 - 0.805 - - - - 0.792 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
56. kctd15a ENSDARG00000045893 1272 1.589 - 0.855 - - - - 0.734 - - potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
57. ptp4a2 ptp4a2 3196 1.588 - 0.840 - - - - 0.748 - -
58. AIM1L AIM1L 899 1.583 - - - - - 0.758 0.825 - -
59. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.58 - - - - - 0.759 0.821 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
60. helz ENSDARG00000030560 3259 1.578 - 0.822 - - - - 0.756 - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
61. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 1.574 - 0.817 - - - 0.757 - - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
62. riok1 ENSDARG00000016399 936 1.573 - - - - 0.834 - 0.739 - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
63. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.571 - - - - - 0.790 0.781 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
64. lman2 ENSDARG00000061854 6251 1.571 - - - - 0.824 - 0.747 - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
65. ap1s3b ENSDARG00000027966 1064 1.57 0.766 - - - - - 0.804 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
66. ahr2 ENSDARG00000021833 762 1.564 - 0.846 - - - - 0.718 - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
67. pvrl1b 1645 1.562 - - - - - 0.730 0.832 - - poliovirus receptor-related 1b
68. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 1.56 - - - - - 0.810 0.750 - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
69. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.553 - 0.814 - - - - 0.739 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
70. AL929434.1 AL929434.1 3294 1.55 - 0.827 - - - - 0.723 - -
71. prkar1aa ENSDARG00000076128 6565 1.549 - - - - - 0.713 0.836 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
72. ttc3 ENSDARG00000086075 2157 1.549 - 0.839 - - - - 0.710 - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
73. tmem110 497 1.548 - 0.847 - - - - 0.701 - - transmembrane protein 110
74. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 1.547 - 0.838 - - - 0.709 - - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
75. tmub1 ENSDARG00000038787 1012 1.543 0.720 - - - - - 0.823 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
76. col18a1 col18a1 20555 1.54 - - - - 0.784 - 0.756 - -
77. sf3b1 ENSDARG00000056138 5785 1.538 - - - - - 0.822 0.716 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
78. trappc4 ENSDARG00000027418 1491 1.534 - 0.831 - - - - 0.703 - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
79. magt1 ENSDARG00000058062 3903 1.528 - - - - - 0.711 0.817 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
80. CABZ01007794.1 CABZ01007794.1 14290 1.527 - - - - 0.749 - 0.778 - -
81. syap1 ENSDARG00000012946 3560 1.523 - 0.770 - - - - 0.753 - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
82. cdc20 ENSDARG00000100741 3264 1.523 - - - - - 0.739 0.784 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
83. nufip2 ENSDARG00000069066 3965 1.521 - - - - - 0.795 0.726 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
84. ufc1 ENSDARG00000022340 2618 1.517 - - - - - 0.707 0.810 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
85. si:dkey-253d23.10 7602 1.511 - - - - - 0.775 0.736 - - si:dkey-253d23.10, transcript variant X4
86. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 1.51 - - - - - 0.704 0.806 - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
87. TCEB3 2429 1.508 - - - - - 0.703 0.805 - - transcription elongation factor B (SIII), polypeptide 3
88. pitpnaa ENSDARG00000039490 1096 1.503 0.700 - - - - - 0.803 - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
89. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.492 - - - - - 0.716 0.776 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
90. usf1 ENSDARG00000041689 1619 1.49 - - 0.787 - - - 0.703 - - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
91. ywhabl ENSDARG00000040287 39045 1.484 - - - - - 0.714 0.770 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
92. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.481 - - - 0.701 - - 0.780 - - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
93. pl10 pl10 10795 1.481 - - - - 0.765 - 0.716 - -
94. nhp2 ENSDARG00000069422 9925 1.469 - - - - 0.705 - 0.764 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
95. tfap2c ENSDARG00000040606 4628 1.457 - - - - - 0.725 0.732 - - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
96. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.452 - - - - - 0.740 0.712 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
97. TMEM30B ENSDARG00000054122 1519 1.442 - - - - - 0.735 0.707 - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
98. si:ch211-11k18.4 ENSDARG00000087869 3298 1.436 - - - - - 0.724 0.712 - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
99. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.43 - - - 0.714 - - 0.716 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
100. ifrd1 ENSDARG00000068708 2858 0.984 - - - - 0.984 - - - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]

There are 1358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA