Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps18

Gene Name Gene ID Reads Annotation
vps18 ENSDARG00000070433 320 vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]










Genes with expression patterns similar to vps18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps18 ENSDARG00000070433 320 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
2. ENSDARG00000089986 ENSDARG00000089986 308 2.43 0.721 - - - - 0.723 - 0.986 -
3. CABZ01058048.1 CABZ01058048.1 268 1.822 - 0.845 - - - - - 0.977 -
4. hiat1b ENSDARG00000043055 757 1.791 - 0.829 - - - - - 0.962 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
5. sh3gl3a ENSDARG00000013360 3602 1.75 - 0.875 - - - - - 0.875 - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
6. minpp1b ENSDARG00000045172 174 1.725 0.824 0.901 - - - - - - - multiple inositol-polyphosphate phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-888]
7. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.703 - 0.866 - - - - - 0.837 - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
8. CEP170B ENSDARG00000074636 336 1.698 0.726 0.972 - - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
9. pm20d1.2 ENSDARG00000062096 97 1.694 - 0.919 - - - - 0.775 - - peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]
10. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 1.69 - 0.871 - - - - - 0.819 - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
11. emc9 ENSDARG00000034633 686 1.687 - 0.738 - - - - - 0.949 - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
12. vps45 ENSDARG00000061180 791 1.685 - 0.813 - - - - - 0.872 - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
13. atp7a ENSDARG00000003699 476 1.673 - 0.702 - - - - - 0.971 - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
14. ddx41 666 1.66 - 0.870 - - - - 0.790 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
15. si:ch211-241n15.1 si:ch211-241n15.1 632 1.654 - - - - - 0.773 0.881 - -
16. si:ch211-210c8.7 ENSDARG00000092856 884 1.652 - 0.839 - - - - - 0.813 - si:ch211-210c8.7 [Source:ZFIN;Acc:ZDB-GENE-090313-81]
17. si:dkeyp-1h4.8 208 1.651 - 0.931 - - - - 0.720 - - si:dkeyp-1h4.8
18. znf131 ENSDARG00000068400, ENSDARG00000110506 920 1.65 - 0.707 - - - - - 0.943 - zinc finger protein 131 [Source:ZFIN;Acc:ZDB-GENE-040426-1563]
19. si:ch211-13c6.2 ENSDARG00000027738 1521 1.607 - 0.763 - - - - - 0.844 - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
20. rgl3a ENSDARG00000071213 350 1.536 - 0.792 - - - - 0.744 - - ral guanine nucleotide dissociation stimulator-like 3a [Source:ZFIN;Acc:ZDB-GENE-101130-1]
21. gorab ENSDARG00000042031 483 1.504 0.722 - - - - - 0.782 - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
22. zgc:101858 ENSDARG00000035129 1393 1.502 - - - - - 0.726 0.776 - - zgc:101858 [Source:ZFIN;Acc:ZDB-GENE-040927-13]
23. bnip2 ENSDARG00000013397 206 1.497 0.755 0.742 - - - - - - - BCL2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040109-6]
24. ppat ENSDARG00000004517 3349 1.494 - 0.707 - - - - - 0.787 - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
25. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.484 0.716 - - - 0.768 - - - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
26. sqrdl 1598 1.446 - 0.723 - - - - 0.723 - - sulfide quinone reductase-like (yeast), transcript variant X2
27. fbp1a ENSDARG00000021366 1778 1.44 - 0.735 - - - 0.705 - - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
28. epn1 ENSDARG00000010411 725 1.44 - - - - - 0.722 - 0.718 - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
29. gtf3c2 ENSDARG00000004574 153 0.987 - - - - - - - 0.987 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
30. wnt8b ENSDARG00000006911 98 0.986 - - - - - - - 0.986 - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
31. inaa ENSDARG00000011862 115 0.986 - - - - - - - 0.986 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
32. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.986 - - - - - - - 0.986 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
33. ogfr ENSDARG00000037837 1001 0.986 - - - - - - - 0.986 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
34. st6galnac1.2 ENSDARG00000043816 51 0.985 - - - - - - - 0.985 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
35. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.985 - - - - - - - 0.985 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
36. cabp2b ENSDARG00000052277 119 0.985 - - - - - - - 0.985 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
37. scrn2 ENSDARG00000043497 204 0.985 - - - - - - - 0.985 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
38. sec22c ENSDARG00000063387 203 0.985 - - - - - - - 0.985 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
39. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.985 - - - - - - - 0.985 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
40. vhl ENSDARG00000070617 663 0.985 - - - - - - - 0.985 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
41. zgc:112001 ENSDARG00000078034 93 0.985 - - - - - - - 0.985 - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
42. CABZ01027547.1 CABZ01027547.1 128 0.985 - - - - - - - 0.985 -
43. ZNF337_21 ZNF337_21 53 0.985 - - - - - - - 0.985 -
44. syt5b ENSDARG00000011640 70 0.985 - - - - - - - 0.985 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
45. WIZ WIZ 1188 0.984 - - - - - - - 0.984 -
46. gnat2 ENSDARG00000042529 112 0.984 - - - - - - - 0.984 - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
47. celsr1b ENSDARG00000058259 1219 0.984 - - - - - - - 0.984 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
48. gpr37l1a ENSDARG00000006079 422 0.984 - - - - - - - 0.984 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
49. adcy1b ENSDARG00000088634 44 0.984 - - - - - - - 0.984 - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
50. GRIK3 ENSDARG00000077715 178 0.984 - - - - - - - 0.984 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
51. lrit2 ENSDARG00000030626 69 0.984 - - - - - - - 0.984 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
52. gucy1b3 92 0.984 - - - - - - - 0.984 - guanylate cyclase 1, soluble, beta 3
53. zdhhc3 zdhhc3 152 0.984 - - - - - - - 0.984 -
54. si:ch211-57i17.2 ENSDARG00000093354 58 0.984 - - - - - - - 0.984 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
55. il21r il21r 74 0.983 - - - - - - - 0.983 -
56. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 0.983 - - - - - - - 0.983 - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
57. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.983 - - - - - - - 0.983 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
58. mtfr2 ENSDARG00000060394 482 0.983 - - - - - - - 0.983 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
59. rgs9bp ENSDARG00000009466 41 0.983 - - - - - - - 0.983 - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
60. si:dkey-15h14.4 si:dkey-15h14.4 118 0.983 - - - - - - - 0.983 -
61. si:ch211-76l23.6 si:ch211-76l23.6 68 0.983 - - - - - - - 0.983 -
62. speg speg 334 0.983 - - - - - - - 0.983 -
63. si:dkey-170k13.3 si:dkey-170k13.3 397 0.982 - - - - - - - 0.982 -
64. FBXO48 ENSDARG00000086184 110 0.982 - - - - - - - 0.982 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
65. CABZ01066957.1 CABZ01066957.1 161 0.982 - - - - - - - 0.982 -
66. lnx2b ENSDARG00000071478 654 0.982 - - - - - - - 0.982 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
67. cplx4c ENSDARG00000094889 253 0.982 - - - - - - - 0.982 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
68. tgs1 190 0.981 - - - - - - - 0.981 - trimethylguanosine synthase 1, transcript variant X1
69. cdan1 ENSDARG00000042261 658 0.981 - - - - - - - 0.981 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
70. CR942805.1 CR942805.1 94 0.981 - - - - - - - 0.981 -
71. lingo4b ENSDARG00000078527 235 0.981 - - - - - - - 0.981 - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
72. tmem145 ENSDARG00000088342 183 0.981 - - - - - - - 0.981 - transmembrane protein 145 [Source:ZFIN;Acc:ZDB-GENE-110411-84]
73. glipr1b ENSDARG00000030078 73 0.981 - - - - - - - 0.981 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
74. fam86a fam86a 174 0.981 - - - - - - - 0.981 -
75. bag5 ENSDARG00000017316 195 0.981 - - - - - - - 0.981 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
76. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 0.981 - - - - - - - 0.981 - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
77. fabp7b ENSDARG00000034650 397 0.981 - - - - - - - 0.981 - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
78. smfn ENSDARG00000009806 1280 0.981 - - - - - - - 0.981 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
79. C2H1orf27 245 0.98 - - - - - - - 0.980 - c2h1orf27 homolog (H. sapiens), transcript variant X1
80. slc35b1_1 ENSDARG00000038213 194 0.98 - - - - - - - 0.980 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
81. gtf3c3 ENSDARG00000043247 202 0.98 - - - - - - - 0.980 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
82. C24H8orf33 C24H8orf33 406 0.98 - - - - - - - 0.980 -
83. otx1b 96 0.98 - - - - - - - 0.980 - orthodenticle homeobox 1b
84. dnase2 ENSDARG00000073893 141 0.98 - - - - - - - 0.980 - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
85. zgc:110366 ENSDARG00000004167 314 0.979 - - - - - - - 0.979 - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
86. pcyt1ba ENSDARG00000058162 206 0.979 - - - - - - - 0.979 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
87. rlbp1a ENSDARG00000012504 111 0.979 - - - - - - - 0.979 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
88. fra10ac1 ENSDARG00000102615 425 0.978 - - - - - - - 0.978 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
89. NUDT12 ENSDARG00000100813 378 0.978 - - - - - - - 0.978 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
90. E2F2 E2F2 871 0.978 - - - - - - - 0.978 -
91. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 0.978 - - - - - - - 0.978 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
92. BX000999.4_1 BX000999.4_1 222 0.978 - - - - - - - 0.978 -
93. ZNF337_7 ZNF337_7 198 0.978 - - - - - - - 0.978 -
94. cep135 ENSDARG00000002991 164 0.978 - - - - - - - 0.978 - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
95. exd3 ENSDARG00000063140 119 0.978 - - - - - - - 0.978 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
96. zcchc10 ENSDARG00000091092 1333 0.977 - - - - - - - 0.977 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
97. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.977 - - - - - - - 0.977 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
98. dna2 ENSDARG00000078759 846 0.977 - - - - - - - 0.977 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
99. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 0.977 - - - - - - - 0.977 - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
100. siae ENSDARG00000040527, ENSDARG00000111850 186 0.977 - - - - - - - 0.977 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]

There are 1168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA