Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vps13a

Gene Name Gene ID Reads Annotation
vps13a ENSDARG00000039225 3151 vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]










Genes with expression patterns similar to vps13a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps13a ENSDARG00000039225 3151 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]
2. stk10 ENSDARG00000101894 1587 2.418 0.751 - - - - - 0.726 - 0.941 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
3. txndc5 ENSDARG00000009342 5387 1.93 - 0.938 - - - 0.992 - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
4. ARHGAP35 2409 1.922 - 0.923 - - - 0.999 - - - Rho GTPase activating protein 35b, transcript variant X2
5. mir205 2147 1.917 - - - - - 0.996 - - 0.921 microRNA 205
6. tpd52l2a ENSDARG00000027154 4359 1.908 - 0.909 - - - 0.999 - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
7. chst11 ENSDARG00000034375 2701 1.904 - 0.907 - - - 0.997 - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
8. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.892 - 0.897 - - - 0.995 - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
9. slc7a8a ENSDARG00000075831 2987 1.888 - 0.938 - - - 0.950 - - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
10. marveld1 ENSDARG00000011724 1025 1.827 - 0.900 - - - - - - 0.927 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
11. hbegfa ENSDARG00000075121 1865 1.821 - 0.923 - - - - - - 0.898 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
12. dlg5a ENSDARG00000074059 1834 1.819 - 0.900 - - - - - - 0.919 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
13. il17rd ENSDARG00000098359 1153 1.813 - - - - - - 0.882 - 0.931 interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
14. capn2a ENSDARG00000091699 5924 1.784 - 0.824 - - - 0.960 - - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
15. slc1a5 ENSDARG00000099186 7580 1.781 - - - - - 0.998 0.783 - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
16. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.78 - 0.889 - - - - - - 0.891 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
17. schip1 ENSDARG00000035175 3838 1.779 - 0.919 - - - - - - 0.860 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
18. hcls1 ENSDARG00000012729 1547 1.726 - 0.910 - - - - 0.816 - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
19. erf ENSDARG00000063417 1053 1.723 - - - - - - 0.837 - 0.886 Ets2 repressor factor [Source:ZFIN;Acc:ZDB-GENE-010724-17]
20. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.71 0.712 - - - - 0.998 - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
21. tnni1al 8272 1.701 - 0.897 - - - 0.804 - - - troponin I, skeletal, slow like, transcript variant X1
22. esyt2a ENSDARG00000030824 1907 1.697 - - - - - 0.995 0.702 - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
23. dhrs3b ENSDARG00000044803 2931 1.692 - - - - - - 0.767 - 0.925 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
24. zgc:194839 ENSDARG00000078550 4003 1.664 - - - - - - - 0.732 0.932 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
25. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.66 - 0.842 - - - 0.818 - - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
26. gna13b ENSDARG00000037924 1963 1.658 - - - - - - 0.768 - 0.890 guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
27. HIP1R HIP1R 490 1.655 - - - - 0.733 - - - 0.922
28. slc25a23a ENSDARG00000005690 824 1.651 - - - - - - 0.715 - 0.936 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
29. tmcc3 ENSDARG00000045525, ENSDARG00000109550 1347 1.647 - 0.912 - - - - 0.735 - - transmembrane and coiled-coil domain family 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1811]
30. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.642 - 0.845 - - - 0.797 - - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
31. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.64 - - - - - 0.856 - 0.784 - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
32. si:rp71-61h23.4 1921 1.639 - 0.916 - - - - 0.723 - - si:rp71-61h23.4
33. fam83d ENSDARG00000077883 897 1.623 - 0.861 - - - - 0.762 - - family with sequence similarity 83, member D [Source:ZFIN;Acc:ZDB-GENE-041111-264]
34. tyw1 ENSDARG00000062987 1759 1.622 - 0.911 - - - - 0.711 - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-688]
35. dlx3b ENSDARG00000014626 3647 1.621 - - - - - - 0.803 - 0.818 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
36. CABZ01049057.1 CABZ01049057.1 479 1.618 - 0.908 - - - - 0.710 - -
37. btbd10b ENSDARG00000020252 7251 1.616 - 0.850 - - - - 0.766 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
38. rhoac ENSDARG00000116058 9256 1.613 - 0.758 - - - 0.855 - - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
39. btr01 ENSDARG00000051965 610 1.613 - 0.872 - - - - 0.741 - - bloodthirsty-related gene family, member 1 [Source:ZFIN;Acc:ZDB-GENE-090511-2]
40. SVIL SVIL 2589 1.608 - 0.730 - - - - - - 0.878
41. oaz1a ENSDARG00000071403 21112 1.604 - - - - - 0.901 - - 0.703 ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
42. zfand3 ENSDARG00000052833 2682 1.595 - 0.861 - - - - - - 0.734 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
43. b3gnt2b ENSDARG00000091902 4125 1.592 - - - - - - 0.723 - 0.869 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
44. emc7 ENSDARG00000012144 1608 1.591 0.721 0.870 - - - - - - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
45. abi1a ENSDARG00000010155 5631 1.577 - 0.858 - 0.719 - - - - - abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
46. coasy ENSDARG00000042747 336 1.51 - - - - 0.707 - 0.803 - - CoA synthase [Source:ZFIN;Acc:ZDB-GENE-040912-137]
47. eif4ebp2 ENSDARG00000031819 13168 1.506 0.760 - - - - - - - 0.746 eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
48. tmem258 ENSDARG00000078785 9578 1.489 - - - - - 0.703 - - 0.786 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
49. pxn_1 pxn_1 3991 1.488 0.719 - - - - - - - 0.769
50. ube2v1 ENSDARG00000041875 5739 1.478 - - - - - - 0.726 - 0.752 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
51. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 1.46 - - - - - - - 0.709 0.751 epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
52. sf3b2 ENSDARG00000018049 4675 1.438 - - - - - - 0.724 - 0.714 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
53. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 1 - - - - - 1.000 - - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
54. gopc ENSDARG00000023117 1206 1 - - - - - 1.000 - - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
55. GRK6 ENSDARG00000032157 1136 0.999 - - - - - 0.999 - - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
56. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.999 - - - - - 0.999 - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
57. arl8ba ENSDARG00000006915 720 0.999 - - - - - 0.999 - - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
58. hspb7 ENSDARG00000104441 1417 0.999 - - - - - 0.999 - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
59. thoc1 ENSDARG00000088246 1718 0.999 - - - - - 0.999 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
60. fam50a ENSDARG00000024895 3020 0.999 - - - - - 0.999 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
61. sufu ENSDARG00000056801 1543 0.999 - - - - - 0.999 - - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
62. FRG1 ENSDARG00000056504 1196 0.999 - - - - - 0.999 - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
63. LRP10 ENSDARG00000054539 1895 0.999 - - - - - 0.999 - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
64. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.999 - - - - - 0.999 - - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
65. sart3 ENSDARG00000008032 2594 0.999 - - - - - 0.999 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
66. zcchc7 ENSDARG00000055443 2159 0.999 - - - - - 0.999 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
67. cited2 ENSDARG00000030905 1319 0.999 - - - - - 0.999 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:ZFIN;Acc:ZDB-GENE-041010-141]
68. myo5b ENSDARG00000062003 653 0.999 - - - - - 0.999 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
69. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.999 - - - - - 0.999 - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
70. emc8 ENSDARG00000017093 1947 0.999 - - - - - 0.999 - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
71. kifc3 ENSDARG00000054978 1220 0.999 - - - - - 0.999 - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
72. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 0.999 - - - - - 0.999 - - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
73. ctdspla ENSDARG00000071673 1447 0.999 - - - - - 0.999 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
74. timm10b ENSDARG00000043898 1233 0.999 - - - - - 0.999 - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
75. hm13 ENSDARG00000037846 5019 0.999 - - - - - 0.999 - - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
76. hoxb1a ENSDARG00000008174 462 0.999 - - - - - 0.999 - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
77. mgat1b ENSDARG00000036065 996 0.999 - - - - - 0.999 - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
78. MTMR11 ENSDARG00000069755 917 0.999 - - - - - 0.999 - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
79. s1pr2 ENSDARG00000036548 1109 0.999 - - - - - 0.999 - - - sphingosine-1-phosphate receptor 2 [Source:ZFIN;Acc:ZDB-GENE-020123-2]
80. UNCX ENSDARG00000102976 847 0.999 - - - - - 0.999 - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
81. ndrg2 ENSDARG00000011170 11442 0.999 - - - - - 0.999 - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
82. mef2cb ENSDARG00000009418 1124 0.999 - - - - - 0.999 - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
83. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.999 - - - - - 0.999 - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
84. nuf2 ENSDARG00000034624 2252 0.999 - - - - - 0.999 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
85. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.999 - - - - - 0.999 - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
86. icln icln 1279 0.999 - - - - - 0.999 - - -
87. etf1 etf1 12861 0.999 - - - - - 0.999 - - -
88. olfml2bb ENSDARG00000021480 256 0.999 - - - - - 0.999 - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
89. fam3c ENSDARG00000056152 3833 0.998 - - - - - 0.998 - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
90. nudt3a ENSDARG00000016256 2713 0.998 - - - - - 0.998 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
91. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 0.998 - - - - - 0.998 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
92. ptgs1 ENSDARG00000052148 2443 0.998 - - - - - 0.998 - - - prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
93. ppm1la ENSDARG00000063218 2142 0.998 - - - - - 0.998 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
94. C19H1orf51 C19H1orf51 1776 0.998 - - - - - 0.998 - - -
95. pir ENSDARG00000056638 722 0.998 - - - - - 0.998 - - - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
96. pfkpa ENSDARG00000028000 1206 0.998 - - - - - 0.998 - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
97. mcm7 ENSDARG00000101180 12417 0.998 - - - - - 0.998 - - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
98. pitx2 ENSDARG00000036194 2279 0.998 - - - - - 0.998 - - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
99. kank2 ENSDARG00000018393 1804 0.998 - - - - - 0.998 - - - KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
100. prpf6 ENSDARG00000091367 1868 0.998 - - - - - 0.998 - - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]

There are 940 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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