Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps11

Gene Name Gene ID Reads Annotation
vps11 ENSDARG00000036338 421 vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]










Genes with expression patterns similar to vps11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps11 ENSDARG00000036338 421 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
2. ap5s1 ENSDARG00000076755 318 1.833 0.967 - - - - - 0.866 - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
3. grp ENSDARG00000043074 747 1.791 0.978 0.813 - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
4. EPS8L2 ENSDARG00000058108 484 1.784 0.990 0.794 - - - - - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
5. ATXN7 ENSDARG00000074804 1137 1.75 0.922 - - - - - 0.828 - - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
6. osgn1 ENSDARG00000052279 5607 1.749 0.987 0.762 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
7. clic1 ENSDARG00000103340 2235 1.748 0.981 - - - - - 0.767 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
8. si:ch211-264e16.1 ENSDARG00000068947 1358 1.735 0.986 - - - 0.749 - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
9. TIMM22 ENSDARG00000091413 957 1.723 0.928 - - - - - 0.795 - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
10. cbfb ENSDARG00000040917 1422 1.714 0.905 - - - - - 0.809 - - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
11. ago4 ENSDARG00000100854 496 1.71 0.926 0.784 - - - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
12. swt1 ENSDARG00000094010 472 1.704 0.984 - - 0.720 - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
13. trim25l ENSDARG00000020863 292 1.701 0.996 - - - - - 0.705 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
14. chmp3 ENSDARG00000038064 577 1.691 0.948 - - - - - 0.743 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
15. CU655970.1 CU655970.1 2123 1.689 0.985 - - - - - 0.704 - -
16. zbtb4 ENSDARG00000105255 362 1.687 0.926 - - - - - 0.761 - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
17. BX005085.2 ENSDARG00000098122 196 1.686 0.984 - - 0.702 - - - - -
18. si:dkey-169i5.4 ENSDARG00000077862 511 1.676 0.936 - - 0.740 - - - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
19. tgm5l ENSDARG00000098837 174 1.662 - - - - 0.759 - 0.903 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
20. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 1.65 0.944 - - - - - - 0.706 - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
21. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.649 - - - 0.768 - - 0.881 - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
22. abca1a ENSDARG00000074635 1085 1.647 0.905 - - - - - 0.742 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
23. dlg5a ENSDARG00000074059 1834 1.639 0.935 - - - 0.704 - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
24. zgc:111974 zgc:111974 1386 1.636 0.897 - - - - - 0.739 - -
25. si:ch211-286b5.5 ENSDARG00000096661 3136 1.632 0.829 - - - - - 0.803 - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
26. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 1.628 0.876 - - 0.752 - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
27. cx28.8 ENSDARG00000071042 62 1.626 - 0.832 - 0.794 - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
28. armc1l ENSDARG00000020887 1219 1.62 - 0.887 - - 0.733 - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
29. scaf1 ENSDARG00000054010 3752 1.617 0.876 0.741 - - - - - - - SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
30. bcl2l10 ENSDARG00000026766 1426 1.607 0.861 - - - - - 0.746 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
31. FUZ ENSDARG00000079730 821 1.604 - 0.840 - - - - 0.764 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
32. oip5 ENSDARG00000093597 329 1.601 - 0.853 - 0.748 - - - - - opa interacting protein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-328]
33. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.598 0.868 - - - - - 0.730 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
34. upb1 ENSDARG00000011521, ENSDARG00000116790 920 1.578 - 0.760 - - - - 0.818 - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
35. rasl10a ENSDARG00000062314 207 1.571 - 0.801 - 0.770 - - - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
36. cyp2k18 ENSDARG00000104593 27 1.569 - 0.778 - 0.791 - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
37. si:rp71-1i20.2 ENSDARG00000043198 113 1.562 - 0.773 - 0.789 - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
38. hsdl1 ENSDARG00000041736 171 1.56 - 0.841 - - - - 0.719 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
39. CREB3L4 1085 1.559 - 0.841 - 0.718 - - - - - cAMP responsive element binding protein 3-like 4
40. CR388046.3 ENSDARG00000105537 108 1.558 - 0.785 - 0.773 - - - - -
41. arhgap21b ENSDARG00000075673 948 1.557 - 0.800 - - - - 0.757 - - Rho GTPase activating protein 21b [Source:ZFIN;Acc:ZDB-GENE-030131-4944]
42. ulk4 ENSDARG00000004176 85 1.556 - 0.770 - - - - 0.786 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
43. CABZ01064972.1 ENSDARG00000098966 199 1.552 0.758 - - 0.794 - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
44. smyd4 ENSDARG00000060983 106 1.545 - 0.795 - - 0.750 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
45. CABZ01039859.1 ENSDARG00000076361 540 1.544 - 0.810 - - 0.734 - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
46. SUOX ENSDARG00000091574 122 1.542 - 0.769 - - - - 0.773 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
47. si:ch73-73d17.3 si:ch73-73d17.3 925 1.541 0.812 - - 0.729 - - - - -
48. ccrl1a ccrl1a 40 1.54 - 0.770 - - - - 0.770 - -
49. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.536 - 0.742 - - - - 0.794 - - deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
50. fut9 fut9 519 1.531 - 0.813 - - - - 0.718 - -
51. cybb ENSDARG00000056615 177 1.517 - - - 0.731 - - 0.786 - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
52. nt5c1bb ENSDARG00000033742 1248 1.511 - 0.760 - - - - 0.751 - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
53. kcnh6 kcnh6 59 1.508 - 0.730 - - - - 0.778 - -
54. ptpdc1 ptpdc1 281 1.499 - 0.741 - - - 0.758 - - -
55. arxa ENSDARG00000058011 440 1.498 - - - 0.776 - - 0.722 - - aristaless related homeobox a [Source:ZFIN;Acc:ZDB-GENE-990415-15]
56. IP6K1 ENSDARG00000073744 524 1.49 - 0.729 - 0.761 - - - - - inositol hexakisphosphate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-110317-2]
57. zgc:158852 ENSDARG00000102076 65 1.488 - - - - 0.765 - 0.723 - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
58. kirrel3a ENSDARG00000075806 36 1.484 - 0.769 - - - 0.715 - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
59. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.479 - - - - 0.717 - 0.762 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
60. inadl 80 1.474 - 0.711 - - - - 0.763 - - InaD-like (Drosophila), transcript variant X4
61. si:dkey-287g12.6 ENSDARG00000096808 271 1.473 - 0.707 - 0.766 - - - - - si:dkey-287g12.6 [Source:ZFIN;Acc:ZDB-GENE-130603-36]
62. HHLA2 HHLA2 295 1.473 - 0.771 - - 0.702 - - - -
63. chchd1 ENSDARG00000029100 2121 1.472 0.765 - - - 0.707 - - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
64. si:dkeyp-53d3.5 ENSDARG00000101542 171 1.467 - - - - - - 0.736 0.731 - si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
65. bag6 ENSDARG00000075892 3782 1.465 0.761 - - - - - 0.704 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
66. SLC27A3 SLC27A3 240 1.459 - 0.730 - - 0.729 - - - -
67. CR855307.1 ENSDARG00000099628 338 1.455 - 0.701 - - - 0.754 - - -
68. pigs ENSDARG00000017813 718 1.451 - 0.739 - - - - 0.712 - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
69. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.449 - 0.726 - - - - 0.723 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
70. twf1b ENSDARG00000011661 630 1.444 - 0.730 - - - - 0.714 - - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
71. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.439 - 0.738 - - 0.701 - - - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
72. lrrc32 ENSDARG00000040621 348 1.419 - - - - 0.710 - 0.709 - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
73. pycr1 pycr1 1258 0.996 0.996 - - - - - - - -
74. C2H7orf25 C2H7orf25 209 0.996 0.996 - - - - - - - -
75. si:ch211-270n8.3 87 0.996 0.996 - - - - - - - - si:ch211-270n8.3, transcript variant X2
76. ACOT12 ENSDARG00000054534 61 0.996 0.996 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
77. ugt5b4 ENSDARG00000091916 130 0.996 0.996 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
78. PTPDC1 PTPDC1 30 0.995 0.995 - - - - - - - -
79. fam155a ENSDARG00000075858 91 0.995 0.995 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
80. si:ch211-157l15.4 si:ch211-157l15.4 92 0.995 0.995 - - - - - - - -
81. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.995 0.995 - - - - - - - -
82. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.995 0.995 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
83. gdap1l1 ENSDARG00000028628 233 0.995 0.995 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
84. actr5 ENSDARG00000098235 237 0.995 0.995 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
85. arhgap19 ENSDARG00000083189 210 0.994 0.994 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
86. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.994 0.994 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
87. lzic ENSDARG00000055899 638 0.993 0.993 - - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
88. prickle1a ENSDARG00000040649 700 0.992 0.992 - - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
89. rhogb ENSDARG00000004301 358 0.992 0.992 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
90. si:ch211-254c8.2 233 0.992 0.992 - - - - - - - - si:ch211-254c8.2, transcript variant X4
91. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.992 0.992 - - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
92. bub1 ENSDARG00000077029 634 0.991 0.991 - - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
93. ptpn21 ENSDARG00000062248 2010 0.991 0.991 - - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
94. ing5a ENSDARG00000022413 268 0.991 0.991 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
95. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.99 0.990 - - - - - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
96. cib1 ENSDARG00000103118 291 0.99 0.990 - - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
97. wdr35 ENSDARG00000069269 492 0.99 0.990 - - - - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
98. plk2b ENSDARG00000019130, ENSDARG00000111402 328 0.989 0.989 - - - - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
99. efnb2b ENSDARG00000074050 77 0.988 0.988 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
100. si:ch1073-322p19.1 ENSDARG00000075173 204 0.986 0.986 - - - - - - - - si:ch1073-322p19.1 [Source:ZFIN;Acc:ZDB-GENE-091204-224]

There are 1444 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA