Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for viml

Gene Name Gene ID Reads Annotation
viml ENSDARG00000044501 5 vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]










Genes with expression patterns similar to viml

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. viml ENSDARG00000044501 5 5 - - 1.000 1.000 1.000 1.000 - 1.000 - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
2. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 2 - - 1.000 - - 1.000 - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
3. CR847893.4 CR847893.4 2 2 - - 1.000 - - 1.000 - - -
4. TMEM241 ENSDARG00000090685 11 1.736 - - 1.000 0.736 - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
5. zgc:162402 zgc:162402 298 1.707 - - - - 0.824 0.883 - - -
6. HTR1E 103 1.562 - - - - 0.720 0.842 - - - 5-hydroxytryptamine receptor 1E
7. CR394546.2 ENSDARG00000090061 3 1 - - - - - 1.000 - - -
8. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
9. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
10. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
11. rest ENSDARG00000103046 51 1 - - - - - 1.000 - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
12. CR388163.4 CR388163.4 4 1 - - 1.000 - - - - - -
13. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
14. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
15. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
16. si:dkey-261j4.4 ENSDARG00000035150 32 1 - - - - - 1.000 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
17. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
18. AKNA_1 AKNA_1 2 1 - - 1.000 - - - - - -
19. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
20. fam160b1 ENSDARG00000060168 22 1 - - - - 1.000 - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
21. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
22. fam169b ENSDARG00000069321 5 1 - - - - - 1.000 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
23. spata7 ENSDARG00000075898 16 1 - - 1.000 - - - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
24. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
25. C11H3orf83 C11H3orf83 30 1 - - - - - 1.000 - - -
26. NMUR1 NMUR1 30 1 - - 1.000 - - - - - -
27. slc34a1a ENSDARG00000028824 35 1 - - 1.000 - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
28. si:ch211-113a14.26_1 5 1 - - 1.000 - - - - - - si:ch211-113a14.26
29. slc25a15a ENSDARG00000063539 50 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
30. HDAC11 ENSDARG00000087573 2 1 - - - - 1.000 - - - - histone deacetylase 11 [Source:ZFIN;Acc:ZDB-GENE-040704-7]
31. acoxl ENSDARG00000020149 14 1 - - 1.000 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
32. bbs9 ENSDARG00000079217 4 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
33. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
34. CT583625.2 ENSDARG00000094770 57 1 - - 1.000 - - - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
35. SLC22A14 SLC22A14 24 1 - - 1.000 - - - - - -
36. trpc2 trpc2 10 1 - - - - 1.000 - - - -
37. CABZ01077220.1 ENSDARG00000088198 0 1 - - 1.000 - - - - - -
38. GPR35_1 GPR35_1 1 1 - - - - - 1.000 - - -
39. tgm2b ENSDARG00000074094 1 1 - - 1.000 - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
40. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
41. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - 1.000 - - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
42. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
43. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - 1.000 - - - - - - si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
44. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
45. cacnb4a ENSDARG00000009738 28 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
46. ms4a17a.6 ENSDARG00000007018 6 1 - - 1.000 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
47. CABZ01038376.1 ENSDARG00000105038 0 1 - - 1.000 - - - - - -
48. CABZ01016332.1 CABZ01016332.1 5 1 - - - - - 1.000 - - -
49. ppp2r3a ENSDARG00000077722 7 1 - - 1.000 - - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
50. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
51. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
52. phox2bb ENSDARG00000091029 2 1 - - 1.000 - - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
53. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
54. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
55. KCNH2 KCNH2 1 1 - - - - - 1.000 - - -
56. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
57. PEG3_28 PEG3_28 0 1 - - 1.000 - - - - - -
58. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
59. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
60. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1 - - - - - 1.000 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
61. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - 1.000 - - - - - -
62. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
63. ovca2 ENSDARG00000103748 38 1 - - - - - 1.000 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
64. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1 - - - - - 1.000 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
65. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
66. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - - 1.000 - - - -
67. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
68. CLPX CLPX 2 1 - - 1.000 - - - - - -
69. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
70. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1 - - - - - 1.000 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
71. notchl ENSDARG00000088308 28 1 - - - - - 1.000 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
72. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
73. dkk2 ENSDARG00000076420 553 1 - - - - - 1.000 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
74. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
75. PATL2 PATL2 10 1 - - - - - 1.000 - - -
76. BX119910.10 BX119910.10 0 1 - - 1.000 - - - - - -
77. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
78. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
79. U1_51 U1_51 0 1 - - 1.000 - - - - - -
80. ENSDARG00000075665 ENSDARG00000075665 5 1 - - 1.000 - - - - - -
81. DOCK9 ENSDARG00000114086 3 1 - - 1.000 - - - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
82. dpagt1 ENSDARG00000061061 3 1 - - - - - 1.000 - - - dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) [Source:ZFIN;Acc:ZDB-GENE-060526-18]
83. zgc:163061_1 ENSDARG00000075538, ENSDARG00000076766 18 1 - - - - - 1.000 - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
84. CABZ01033130.1 CABZ01033130.1 5 1 - - - - - 1.000 - - -
85. si:ch211-37p17.5 si:ch211-37p17.5 4 1 - - 1.000 - - - - - -
86. CMAS CMAS 10 1 - - - - - 1.000 - - -
87. n6amt2 7 1 - - 1.000 - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
88. MFAP4_5 MFAP4_5 4 1 - - 1.000 - - - - - -
89. tmem237a ENSDARG00000041735 13 1 - - - - - 1.000 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
90. CABZ01044085.1 CABZ01044085.1 3 1 - - 1.000 - - - - - -
91. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
92. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
93. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
94. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - 1.000 - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
95. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
96. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
97. gzmk ENSDARG00000028780 1 1 - - 1.000 - - - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
98. ca5 ca5 1 1 - - 1.000 - - - - - -
99. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - 1.000 - - - - - -
100. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - 1.000 - - - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]

There are 459 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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