Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for viml

Gene Name Gene ID Reads Annotation
viml ENSDARG00000044501 5 vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]










Genes with expression patterns similar to viml

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. viml ENSDARG00000044501 5 5 - - 1.000 1.000 1.000 1.000 - 1.000 - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
2. CR847893.4 CR847893.4 2 2 - - 1.000 - - 1.000 - - -
3. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 2 - - 1.000 - - 1.000 - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
4. TMEM241 ENSDARG00000090685 11 1.736 - - 1.000 0.736 - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
5. zgc:162402 zgc:162402 298 1.707 - - - - 0.824 0.883 - - -
6. HTR1E 103 1.562 - - - - 0.720 0.842 - - - 5-hydroxytryptamine receptor 1E
7. si:dkey-156j15.1 ENSDARG00000109821 1 1 - - 1.000 - - - - - - si:dkey-156j15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-81]
8. CR352230.1 CR352230.1 1 1 - - - - - 1.000 - - -
9. GP9 ENSDARG00000090638 53 1 - - - - - 1.000 - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
10. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
11. BX119910.10 BX119910.10 0 1 - - 1.000 - - - - - -
12. il13 ENSDARG00000077809 8 1 - - - - - 1.000 - - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
13. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
14. si:dkey-261j4.4 ENSDARG00000035150 32 1 - - - - - 1.000 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
15. CU693378.1 CU693378.1 0 1 - - 1.000 - - - - - -
16. 5S_rRNA_5 5S_rRNA_5 1 1 - - 1.000 - - - - - -
17. KCNH2 KCNH2 1 1 - - - - - 1.000 - - -
18. slc6a1l ENSDARG00000041205 1 1 - - - - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296]
19. trpc2 trpc2 10 1 - - - - 1.000 - - - -
20. CABZ01033130.1 CABZ01033130.1 5 1 - - - - - 1.000 - - -
21. U1_41 U1_41 1 1 - - - - - 1.000 - - -
22. ppp2r3a ENSDARG00000077722 7 1 - - 1.000 - - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
23. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
24. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
25. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
26. SCAMP5 SCAMP5 19 1 - - 1.000 - - - - - -
27. anpepa ENSDARG00000041083, ENSDARG00000111591 5 1 - - - - - 1.000 - - - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
28. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
29. HDAC11 ENSDARG00000087573 2 1 - - - - 1.000 - - - - histone deacetylase 11 [Source:ZFIN;Acc:ZDB-GENE-040704-7]
30. PATL2 PATL2 10 1 - - - - - 1.000 - - -
31. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
32. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
33. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
34. si:ch211-155e24.2 si:ch211-155e24.2 0 1 - - 1.000 - - - - - -
35. SLC22A14 SLC22A14 24 1 - - 1.000 - - - - - -
36. CT027762.3_1 CT027762.3_1 62 1 - - - - - 1.000 - - -
37. CMYA5 ENSDARG00000061379 65 1 - - 1.000 - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
38. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - 1.000 - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
39. si:dkey-151m22.9 si:dkey-151m22.9 6 1 - - 1.000 - - - - - -
40. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - 1.000 - - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
41. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
42. CABZ01044085.1 CABZ01044085.1 3 1 - - 1.000 - - - - - -
43. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
44. PEG3_28 PEG3_28 0 1 - - 1.000 - - - - - -
45. Metazoa_SRP_14 Metazoa_SRP_14 0 1 - - 1.000 - - - - - -
46. CR394546.2 ENSDARG00000090061 3 1 - - - - - 1.000 - - -
47. MFAP4_5 MFAP4_5 4 1 - - 1.000 - - - - - -
48. C11H3orf83 C11H3orf83 30 1 - - - - - 1.000 - - -
49. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
50. CLPX CLPX 2 1 - - 1.000 - - - - - -
51. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
52. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
53. fam160b1 ENSDARG00000060168 22 1 - - - - 1.000 - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
54. SYDE1 ENSDARG00000077440 4 1 - - - - - 1.000 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
55. PEG3_26 PEG3_26 0 1 - - 1.000 - - - - - -
56. fam169b ENSDARG00000069321 5 1 - - - - - 1.000 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
57. zgc:174712 zgc:174712 47 1 - - - - - 1.000 - - -
58. U1_51 U1_51 0 1 - - 1.000 - - - - - -
59. zgc:163061_1 ENSDARG00000075538, ENSDARG00000076766 18 1 - - - - - 1.000 - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
60. slc5a12 ENSDARG00000005004 15 1 - - - - - 1.000 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
61. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
62. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
63. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 1 - - - - - 1.000 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
64. bbs9 ENSDARG00000079217 4 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
65. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
66. cacnb4a ENSDARG00000009738 28 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
67. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
68. GPR35_1 GPR35_1 1 1 - - - - - 1.000 - - -
69. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
70. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
71. CT583625.2 ENSDARG00000094770 57 1 - - 1.000 - - - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
72. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
73. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
74. tmem237a ENSDARG00000041735 13 1 - - - - - 1.000 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
75. RECK ENSDARG00000090039 15 1 - - 1.000 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
76. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
77. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - - 1.000 - - - -
78. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
79. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
80. CR388163.4 CR388163.4 4 1 - - 1.000 - - - - - -
81. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
82. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
83. phox2bb ENSDARG00000091029 2 1 - - 1.000 - - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
84. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
85. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - 1.000 - - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
86. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
87. ENSDARG00000075665 ENSDARG00000075665 5 1 - - 1.000 - - - - - -
88. DOCK9 ENSDARG00000114086 3 1 - - 1.000 - - - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
89. cx23 ENSDARG00000054150 115 1 - - - - - 1.000 - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
90. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - 1.000 - - -
91. CR854855.2 CR854855.2 1 1 - - - - - 1.000 - - -
92. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
93. AKAP13 ENSDARG00000079994 1 1 - - 1.000 - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
94. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
95. SUSD1 ENSDARG00000058839 4 1 - - 1.000 - - - - - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
96. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - 1.000 - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
97. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
98. si:ch211-37p17.5 si:ch211-37p17.5 4 1 - - 1.000 - - - - - -
99. slc34a1a ENSDARG00000028824 35 1 - - 1.000 - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
100. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - 1.000 - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]

There are 459 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA