Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for viml

Gene Name Gene ID Reads Annotation
viml ENSDARG00000044501 5 vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]










Genes with expression patterns similar to viml

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. viml ENSDARG00000044501 5 5 - - 1.000 1.000 1.000 1.000 - 1.000 - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
2. CR847893.4 CR847893.4 2 2 - - 1.000 - - 1.000 - - -
3. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 2 - - 1.000 - - 1.000 - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
4. TMEM241 ENSDARG00000090685 11 1.736 - - 1.000 0.736 - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
5. zgc:162402 zgc:162402 298 1.707 - - - - 0.824 0.883 - - -
6. HTR1E 103 1.562 - - - - 0.720 0.842 - - - 5-hydroxytryptamine receptor 1E
7. si:ch211-113a14.26_1 5 1 - - 1.000 - - - - - - si:ch211-113a14.26
8. slc34a1a ENSDARG00000028824 35 1 - - 1.000 - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
9. NMUR1 NMUR1 30 1 - - 1.000 - - - - - -
10. GPR35_1 GPR35_1 1 1 - - - - - 1.000 - - -
11. trpc2 trpc2 10 1 - - - - 1.000 - - - -
12. CABZ01077220.1 ENSDARG00000088198 0 1 - - 1.000 - - - - - -
13. bbs9 ENSDARG00000079217 4 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
14. acoxl ENSDARG00000020149 14 1 - - 1.000 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
15. SLC22A14 SLC22A14 24 1 - - 1.000 - - - - - -
16. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
17. CT583625.2 ENSDARG00000094770 57 1 - - 1.000 - - - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
18. slc25a15a ENSDARG00000063539 50 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
19. HDAC11 ENSDARG00000087573 2 1 - - - - 1.000 - - - - histone deacetylase 11 [Source:ZFIN;Acc:ZDB-GENE-040704-7]
20. cacnb4a ENSDARG00000009738 28 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
21. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - 1.000 - - - - - - si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
22. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
23. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
24. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - 1.000 - - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
25. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
26. tgm2b ENSDARG00000074094 1 1 - - 1.000 - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
27. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
28. CABZ01038376.1 ENSDARG00000105038 0 1 - - 1.000 - - - - - -
29. ppp2r3a ENSDARG00000077722 7 1 - - 1.000 - - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
30. CABZ01016332.1 CABZ01016332.1 5 1 - - - - - 1.000 - - -
31. ms4a17a.6 ENSDARG00000007018 6 1 - - 1.000 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
32. rest ENSDARG00000103046 51 1 - - - - - 1.000 - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
33. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
34. CR394546.2 ENSDARG00000090061 3 1 - - - - - 1.000 - - -
35. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
36. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
37. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
38. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
39. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
40. CR388163.4 CR388163.4 4 1 - - 1.000 - - - - - -
41. AKNA_1 AKNA_1 2 1 - - 1.000 - - - - - -
42. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
43. si:dkey-261j4.4 ENSDARG00000035150 32 1 - - - - - 1.000 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
44. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
45. C11H3orf83 C11H3orf83 30 1 - - - - - 1.000 - - -
46. spata7 ENSDARG00000075898 16 1 - - 1.000 - - - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
47. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
48. fam169b ENSDARG00000069321 5 1 - - - - - 1.000 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
49. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
50. fam160b1 ENSDARG00000060168 22 1 - - - - 1.000 - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
51. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
52. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1 - - - - - 1.000 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
53. ovca2 ENSDARG00000103748 38 1 - - - - - 1.000 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
54. CLPX CLPX 2 1 - - 1.000 - - - - - -
55. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
56. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
57. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - - 1.000 - - - -
58. notchl ENSDARG00000088308 28 1 - - - - - 1.000 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
59. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
60. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1 - - - - - 1.000 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
61. BX119910.10 BX119910.10 0 1 - - 1.000 - - - - - -
62. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
63. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
64. dkk2 ENSDARG00000076420 553 1 - - - - - 1.000 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
65. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
66. PATL2 PATL2 10 1 - - - - - 1.000 - - -
67. phox2bb ENSDARG00000091029 2 1 - - 1.000 - - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
68. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
69. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
70. PEG3_28 PEG3_28 0 1 - - 1.000 - - - - - -
71. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
72. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
73. KCNH2 KCNH2 1 1 - - - - - 1.000 - - -
74. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
75. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - 1.000 - - - - - -
76. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1 - - - - - 1.000 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
77. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
78. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
79. zgc:174712 zgc:174712 47 1 - - - - - 1.000 - - -
80. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
81. CU302316.1 ENSDARG00000109600 2 1 - - - - - 1.000 - - -
82. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 1 - - - - - 1.000 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
83. PEG3_26 PEG3_26 0 1 - - 1.000 - - - - - -
84. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - 1.000 - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
85. agbl5 ENSDARG00000045900 2 1 - - 1.000 - - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
86. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - 1.000 - - -
87. SMCHD1 ENSDARG00000104374 2 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
88. GP9 ENSDARG00000090638 53 1 - - - - - 1.000 - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
89. SYDE1 ENSDARG00000077440 4 1 - - - - - 1.000 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
90. Metazoa_SRP_14 Metazoa_SRP_14 0 1 - - 1.000 - - - - - -
91. SMU1 SMU1 3 1 - - 1.000 - - - - - -
92. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - 1.000 - - - - - -
93. si:ch211-155e24.2 si:ch211-155e24.2 0 1 - - 1.000 - - - - - -
94. slc6a1l ENSDARG00000041205 1 1 - - - - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296]
95. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - 1.000 - - - - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
96. dennd6aa ENSDARG00000030239 1 1 - - 1.000 - - - - - - DENN/MADD domain containing 6Aa [Source:ZFIN;Acc:ZDB-GENE-041010-63]
97. cyp39a1 ENSDARG00000017982 4 1 - - 1.000 - - - - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
98. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - 1.000 - - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
99. cx23 ENSDARG00000054150 115 1 - - - - - 1.000 - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
100. PEG3_8 PEG3_8 1 1 - - 1.000 - - - - - -

There are 459 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA