Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vhl

Gene Name Gene ID Reads Annotation
vhl ENSDARG00000070617 663 von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]










Genes with expression patterns similar to vhl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vhl ENSDARG00000070617 663 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
2. pole ENSDARG00000058533, ENSDARG00000115430 381 2.596 - 0.873 - - - 0.800 - 0.923 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
3. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 2.321 - 0.781 - - - - 0.750 0.790 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
4. sec22c ENSDARG00000063387 203 1.89 - 0.895 - - - - - 0.995 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
5. hiat1b ENSDARG00000043055 757 1.889 - - - - - 0.920 - 0.969 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
6. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.853 - - - - - 0.873 - 0.980 - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
7. daxx ENSDARG00000000729 734 1.845 - - - - - 0.885 - 0.960 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
8. cplx4c ENSDARG00000094889 253 1.844 - - - - - 0.849 - 0.995 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
9. si:ch211-279m15.1 si:ch211-279m15.1 67 1.842 0.895 0.947 - - - - - - -
10. zhx2 zhx2 365 1.831 - - - - - 0.865 - 0.966 -
11. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1.829 0.908 0.921 - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
12. xrcc5_1 ENSDARG00000099298 1533 1.815 - 0.922 - - - - - 0.893 - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
13. usp45 ENSDARG00000075013 227 1.81 0.846 - - - - - - 0.964 - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
14. gtf3c3 ENSDARG00000043247 202 1.788 - - - - - 0.799 - 0.989 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
15. RCVRN RCVRN 66 1.783 0.904 - - - - - 0.879 - -
16. C24H8orf33 C24H8orf33 406 1.782 - - - - - - 0.797 0.985 -
17. pdcd2l ENSDARG00000002754 417 1.776 - 0.939 - - - 0.837 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
18. syt9a ENSDARG00000003994 298 1.776 - - - - - 0.813 - 0.963 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
19. si:dkey-22o22.2 ENSDARG00000102445 149 1.775 - - - - - 0.846 - 0.929 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
20. pkib ENSDARG00000053110 527 1.763 - - - - - 0.867 - 0.896 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
21. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.758 - 0.962 - - - - - 0.796 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
22. uso1 ENSDARG00000019581 479 1.757 - 0.771 - - - - - 0.986 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
23. kctd6a ENSDARG00000043095 480 1.756 - 0.794 - - - - - 0.962 - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
24. stap2a ENSDARG00000092810 591 1.751 - - - - - 0.822 - 0.929 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
25. cwc25 ENSDARG00000003382 2134 1.745 - - - - - 0.818 - 0.927 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
26. CACFD1 ENSDARG00000090818 1298 1.744 - - - - - 0.820 - 0.924 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
27. zcchc10 ENSDARG00000091092 1333 1.744 - - - - - 0.764 - 0.980 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
28. zic1 ENSDARG00000015567 2520 1.742 - - - - - 0.825 - 0.917 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
29. fbxl2 ENSDARG00000012135 577 1.741 - - - - - 0.775 - 0.966 - F-box and leucine-rich repeat protein 2 [Source:ZFIN;Acc:ZDB-GENE-030925-12]
30. fam86a fam86a 174 1.732 - - - - - - 0.741 0.991 -
31. toporsa ENSDARG00000037260 149 1.73 0.887 - - - - 0.843 - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
32. sh3bgrl2 ENSDARG00000036878 282 1.728 - - - - - 0.810 - 0.918 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
33. bik ENSDARG00000045549 18 1.724 0.908 - - - - - 0.816 - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
34. scrn2 ENSDARG00000043497 204 1.724 - - - 0.732 - - - 0.992 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
35. bub1bb ENSDARG00000074927 1667 1.719 - - - - - 0.839 - 0.880 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
36. ctbp2 ctbp2 3255 1.711 - 0.881 - - - 0.830 - - -
37. sh3glb2a ENSDARG00000008983 452 1.71 - 0.792 - - - - - 0.918 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
38. MYO1D ENSDARG00000036863 768 1.709 0.732 - - - - - - 0.977 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
39. fam132a fam132a 498 1.709 - 0.814 - - - 0.895 - - -
40. CABZ01066957.1 CABZ01066957.1 161 1.708 - - - - - 0.716 - 0.992 -
41. cln8 ENSDARG00000075525, ENSDARG00000113042 601 1.704 - - - - - - 0.755 0.949 - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
42. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.701 - - - - - 0.917 - 0.784 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
43. nrxn2a ENSDARG00000061454 291 1.701 - - - - - 0.764 - 0.937 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
44. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.7 - 0.831 - - - 0.869 - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
45. cep19 ENSDARG00000059175 266 1.7 - 0.830 - - - 0.870 - - - centrosomal protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-81]
46. ap2m1b ENSDARG00000033899 317 1.699 - - - - - 0.731 - 0.968 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
47. usp30 ENSDARG00000056842 178 1.696 0.833 - - - - - 0.863 - - ubiquitin specific peptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060526-335]
48. scg2b ENSDARG00000038574 345 1.692 - - - - - 0.760 - 0.932 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
49. ttll7 ENSDARG00000062973 519 1.69 - - - - - 0.752 - 0.938 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
50. pigh ENSDARG00000038348 405 1.689 - 0.876 - - - - - 0.813 - phosphatidylinositol glycan anchor biosynthesis, class H [Source:ZFIN;Acc:ZDB-GENE-040718-303]
51. mertk mertk 1232 1.688 - 0.922 - - - - 0.766 - -
52. slc25a39 ENSDARG00000007449 630 1.685 - - - - - - 0.742 0.943 - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
53. TMEM71 TMEM71 696 1.676 - - - - - - 0.758 0.918 -
54. INF2 37 1.675 0.908 0.767 - - - - - - - inverted formin, FH2 and WH2 domain containing
55. zgc:173548 ENSDARG00000070048 558 1.672 - 0.792 - - - - 0.880 - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
56. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.668 - 0.883 - - - - - 0.785 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
57. rims1a ENSDARG00000074680 143 1.668 0.804 - - - - 0.864 - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
58. utp3 ENSDARG00000056720 922 1.667 - - - - - 0.762 - 0.905 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
59. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.667 - - - - - - 0.726 0.941 - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
60. qki2 ENSDARG00000010018 2230 1.666 - - - - - 0.798 - 0.868 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
61. CR339053.3 CR339053.3 244 1.665 0.900 - - - - 0.765 - - -
62. LGR4 ENSDARG00000060542 1222 1.664 - 0.827 - - - - - 0.837 - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
63. rfng ENSDARG00000019746 627 1.664 - 0.946 - - - 0.718 - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5418]
64. her15.2 her15.2 1701 1.663 - - - - - 0.871 - 0.792 -
65. MIIP ENSDARG00000088346 382 1.662 - 0.880 - 0.782 - - - - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
66. ENSDARG00000090150 ENSDARG00000090150 966 1.662 - - - - - - - 0.957 0.705
67. asna1 ENSDARG00000018190 5253 1.656 - - - - - 0.790 - 0.866 - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
68. ATP13A3 ENSDARG00000076622 1000 1.651 - 0.712 - - - - - 0.939 - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
69. FP102071.1 ENSDARG00000097994 170 1.649 - - - - - 0.841 0.808 - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
70. rpz2 ENSDARG00000091215 765 1.646 0.736 0.910 - - - - - - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
71. ube2j1 ENSDARG00000033489 497 1.645 - 0.767 - - - - - 0.878 - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
72. zic5 ENSDARG00000016022 1034 1.644 - - - - - 0.720 - 0.924 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
73. dre-mir-222a ENSDARG00000090347 131 1.642 - 0.942 - - - - 0.700 - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
74. dynll2b ENSDARG00000005172 935 1.642 - 0.817 - - - 0.825 - - - dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132]
75. cables1 ENSDARG00000099395 361 1.642 - 0.877 - - - 0.765 - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
76. tspan5a ENSDARG00000086033 1865 1.642 - 0.832 - - - 0.810 - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
77. cldn5a ENSDARG00000043716 3865 1.637 - - - - - 0.710 - 0.927 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
78. notch1b ENSDARG00000052094 7874 1.63 - - - - - 0.856 - 0.774 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
79. mir34 176 1.626 0.896 - - - - 0.730 - - - microRNA 34
80. slc44a5b ENSDARG00000057419 534 1.625 - 0.780 - - - 0.845 - - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
81. mark2a ENSDARG00000079905 1765 1.624 - 0.850 - - - - - 0.774 - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
82. pspc1 ENSDARG00000006621 966 1.619 - - - - - 0.896 - 0.723 - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
83. CR388231.3 ENSDARG00000105601 2404 1.619 0.703 - - - - - - 0.916 -
84. TMEM246 ENSDARG00000061553 168 1.616 - - - - - 0.826 0.790 - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
85. caly ENSDARG00000036008 1002 1.616 - 0.743 - - - 0.873 - - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
86. tagln3b ENSDARG00000058394, ENSDARG00000115045 2756 1.613 - 0.770 - - - 0.843 - - - transgelin 3b [Source:ZFIN;Acc:ZDB-GENE-030131-4199]
87. KHDRBS3 ENSDARG00000101020 408 1.612 0.717 - - - - - - 0.895 - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
88. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.605 - - - - - 0.841 - 0.764 - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
89. ppp3ca ENSDARG00000004988 615 1.605 - - - - - 0.831 - 0.774 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
90. ireb2 ENSDARG00000021466 699 1.604 - - - - - 0.707 - 0.897 - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
91. gabpb2a ENSDARG00000007943 1570 1.6 - 0.704 - - - 0.896 - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
92. ENSDARG00000075779 ENSDARG00000075779 64 1.598 - - - - - 0.837 0.761 - -
93. NCBP1 585 1.596 - 0.745 - - - 0.851 - - - nuclear cap binding protein subunit 1
94. AL929115.2 AL929115.2 952 1.593 - - - - - 0.810 - 0.783 -
95. CT583625.2 ENSDARG00000094770 57 1.593 - 0.764 - - - 0.829 - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
96. ssh2a ENSDARG00000088440 1149 1.59 - 0.845 - - - - - 0.745 - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
97. BX294110.1 ENSDARG00000096875 1761 1.587 - 0.723 - - - 0.864 - - -
98. CABZ01088330.1 CABZ01088330.1 679 1.587 - - - - - 0.722 - 0.865 -
99. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.585 - - - - - 0.859 - 0.726 - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
100. taf7 ENSDARG00000019572 1305 1.583 - - - - - 0.743 - 0.840 - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]

There are 2505 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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