Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vent

Gene Name Gene ID Reads Annotation
vent ENSDARG00000100483 74 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]










Genes with expression patterns similar to vent

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vent ENSDARG00000100483 74 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
2. ccdc14 ENSDARG00000098734 3 1.927 - - - - - 0.927 - 1.000 - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. URB1 ENSDARG00000060308 78 1.719 - - 0.792 - - 0.927 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
4. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.673 - - - 0.927 - - - 0.746 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
5. si:busm1-266f07.2 ENSDARG00000031745 19 1.519 - - - - - 0.783 - 0.736 - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
6. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
7. SLC4A10 SLC4A10 1 1 - - - - - - - 1.000 -
8. si:ch211-261b22.2 si:ch211-261b22.2 1 1 - - - - - - - 1.000 -
9. taf4b ENSDARG00000075732 3 1 - - - - - - - 1.000 - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
10. si:ch211-198e13.3 5 1 - - - - - 1.000 - - - si:ch211-198e13.3, transcript variant X1
11. zgc:194252 ENSDARG00000057142 11 1 - - - - - - - 1.000 - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
12. cabp1b ENSDARG00000033411 2 1 - - - - - - - 1.000 - calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
13. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - - - - 1.000 - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
14. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
15. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
16. FRMD1_1 FRMD1_1 3 1 - - - - - - - 1.000 -
17. IL17RA IL17RA 1 1 - - - - - - - 1.000 -
18. zgc:193682 zgc:193682 15 1 - - - - - - - 1.000 -
19. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
20. zgc:113355 zgc:113355 2 1 - - - - - - - 1.000 -
21. anpepb ENSDARG00000103878 8 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
22. si:ch211-187g4.1 ENSDARG00000094350 0 1 - - - - - - - 1.000 - si:ch211-187g4.1 [Source:ZFIN;Acc:ZDB-GENE-070912-161]
23. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
24. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - - 1.000 - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
25. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
26. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - - 1.000 -
27. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - - - 1.000 -
28. si:rp71-36a1.3 ENSDARG00000071662 2 1 - - - - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
29. top1 ENSDARG00000086775 8 1 - - - - - - - 1.000 - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
30. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - - - - - 1.000 - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
31. PEG3_39 PEG3_39 3 1 - - - - - - - 1.000 -
32. larsa ENSDARG00000090988 26 1 - - - - - - - 1.000 - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
33. CABZ01034707.1 CABZ01034707.1 122 1 - - - - - 1.000 - - -
34. iffo1a ENSDARG00000062976 5 1 - - - - - - - 1.000 - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
35. fank1 ENSDARG00000039657 9 1 - - - - - - - 1.000 - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
36. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
37. U6_33 U6_33 0 1 - - - - - - - 1.000 -
38. BX511061.2 BX511061.2 30 1 - - - - - - - 1.000 -
39. pth1ra ENSDARG00000020957 0 1 - - - - - - - 1.000 - parathyroid hormone 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-991123-8]
40. csf1rb ENSDARG00000053624 9 1 - - - - - - - 1.000 - colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
41. nphs2 ENSDARG00000042850 31 0.985 - - - - - - - 0.985 - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
42. ROCK2_3 ROCK2_3 12 0.983 - - - - - 0.983 - - -
43. EVA1B EVA1B 22 0.983 - - - - - 0.983 - - -
44. PRF1 PRF1 69 0.982 - - - - - - - - 0.982
45. parvab ENSDARG00000035629 2 0.982 - - - - - - - - 0.982 parvin, alpha b [Source:ZFIN;Acc:ZDB-GENE-070424-60]
46. rbm27 ENSDARG00000060521 185 0.968 - - - - - 0.968 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
47. CU855890.3 CU855890.3 307 0.961 - - - - - 0.961 - - -
48. ctsl.1 ENSDARG00000003902 25 0.957 - - - - - 0.957 - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
49. TMPRSS7 5 0.957 - - - - - 0.957 - - - transmembrane protease, serine 7
50. SUN2 SUN2 86 0.957 - - - - - 0.957 - - -
51. USP43 USP43 14 0.952 - - - - - - - - 0.952
52. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 0.947 - - - 0.947 - - - - - si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
53. CABZ01006980.1 CABZ01006980.1 5 0.947 - - - 0.947 - - - - -
54. sb:cb846 sb:cb846 1 0.947 - - - 0.947 - - - - -
55. si:busm1-71b9.3 11 0.947 - - - 0.947 - - - - - si:busm1-71b9.3, transcript variant X4
56. tec ENSDARG00000098477 2 0.947 - - - 0.947 - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
57. cx47.1 ENSDARG00000073896 1 0.947 - - - 0.947 - - - - - connexin 47.1 [Source:ZFIN;Acc:ZDB-GENE-040912-134]
58. zgc:158345 2 0.947 - - - 0.947 - - - - - zgc:158345
59. CR382383.3 CR382383.3 2 0.947 - - - 0.947 - - - - -
60. BX005329.3 ENSDARG00000094694 1 0.947 - - - 0.947 - - - - -
61. si:dkey-18c8.3 si:dkey-18c8.3 2 0.947 - - - 0.947 - - - - -
62. HTRA2_1 HTRA2_1 1 0.947 - - - 0.947 - - - - -
63. IQCK ENSDARG00000076831, ENSDARG00000112508 6 0.947 - - - 0.947 - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
64. Metazoa_SRP_2 Metazoa_SRP_2 2 0.947 - - - 0.947 - - - - -
65. tha1 ENSDARG00000076225 183 0.943 - - - - - 0.943 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
66. zp2.6 ENSDARG00000091409 5 0.938 - - - 0.938 - - - - - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
67. lpcat2 ENSDARG00000053010 137 0.937 - - - - - 0.937 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
68. arhgap15 ENSDARG00000062349 28 0.935 - - - - - 0.935 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
69. CMA1_1 CMA1_1 7 0.931 - - - 0.931 - - - - -
70. chmp6b ENSDARG00000102024 37 0.929 - - - - - 0.929 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
71. BX004880.2 BX004880.2 83 0.927 - - - - - 0.927 - - -
72. syt15 ENSDARG00000079926 8 0.927 - - - - - 0.927 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
73. BX323854.4 BX323854.4 3 0.927 - - - - - 0.927 - - -
74. fam166b ENSDARG00000100292 14 0.927 - - - - - 0.927 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
75. POGK POGK 1 0.927 - - - - - 0.927 - - -
76. syt6a ENSDARG00000076730 4 0.927 - - - - - 0.927 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
77. foxi1 ENSDARG00000104566 176 0.927 - - - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
78. CR356223.1 ENSDARG00000093865 1 0.927 - - - - - 0.927 - - -
79. kcnh3 ENSDARG00000069560 4 0.927 - - - - - 0.927 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
80. ccdc41 ccdc41 97 0.927 - - - - - 0.927 - - -
81. dok1a ENSDARG00000078108 9 0.927 - - - - - 0.927 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
82. il12bb ENSDARG00000054542 6 0.927 - - - - - 0.927 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
83. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 0.927 - - - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
84. v2rh11 ENSDARG00000115088 1 0.927 - - - - - 0.927 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
85. NAT14 ENSDARG00000115349 21 0.927 - - - - - 0.927 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
86. HMGXB3 ENSDARG00000077823 2 0.927 - - - - - 0.927 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
87. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 0.927 - - - - - 0.927 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
88. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 0.927 - - - - - 0.927 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
89. CABZ01060813.1 CABZ01060813.1 12 0.927 - - - - - 0.927 - - -
90. trpm5 ENSDARG00000059792 3 0.927 - - - - - 0.927 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
91. C12H16orf93 C12H16orf93 1 0.927 - - - - - 0.927 - - -
92. themis ENSDARG00000010619 5 0.927 - - - - - 0.927 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
93. snR50 snR50 1 0.927 - - - - - 0.927 - - -
94. CELA1_2 CELA1_2 2 0.927 - - - - - 0.927 - - -
95. cldn10l2 ENSDARG00000105042 11 0.927 - - - - - 0.927 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
96. pigf ENSDARG00000032780 7 0.927 - - - - - 0.927 - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
97. si:ch211-117l17.4 ENSDARG00000103534 24 0.927 - - - - - 0.927 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
98. GMEB2 ENSDARG00000093240 6 0.927 - - - - - 0.927 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
99. wdyhv1 ENSDARG00000070403 42 0.927 - - - - - 0.927 - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
100. m17 ENSDARG00000035435 28 0.927 - - - - - 0.927 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA