Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vent

Gene Name Gene ID Reads Annotation
vent ENSDARG00000100483 74 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]










Genes with expression patterns similar to vent

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vent ENSDARG00000100483 74 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
2. ccdc14 ENSDARG00000098734 3 1.927 - - - - - 0.927 - 1.000 - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. URB1 ENSDARG00000060308 78 1.719 - - 0.792 - - 0.927 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
4. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.673 - - - 0.927 - - - 0.746 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
5. si:busm1-266f07.2 ENSDARG00000031745 19 1.519 - - - - - 0.783 - 0.736 - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
6. csf1rb ENSDARG00000053624 9 1 - - - - - - - 1.000 - colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
7. pth1ra ENSDARG00000020957 0 1 - - - - - - - 1.000 - parathyroid hormone 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-991123-8]
8. BX511061.2 BX511061.2 30 1 - - - - - - - 1.000 -
9. U6_33 U6_33 0 1 - - - - - - - 1.000 -
10. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
11. larsa ENSDARG00000090988 26 1 - - - - - - - 1.000 - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
12. PEG3_39 PEG3_39 3 1 - - - - - - - 1.000 -
13. iffo1a ENSDARG00000062976 5 1 - - - - - - - 1.000 - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
14. fank1 ENSDARG00000039657 9 1 - - - - - - - 1.000 - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
15. CABZ01034707.1 CABZ01034707.1 122 1 - - - - - 1.000 - - -
16. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - - 1.000 -
17. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
18. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - - 1.000 - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
19. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
20. si:ch211-187g4.1 ENSDARG00000094350 0 1 - - - - - - - 1.000 - si:ch211-187g4.1 [Source:ZFIN;Acc:ZDB-GENE-070912-161]
21. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - - - - - 1.000 - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
22. top1 ENSDARG00000086775 8 1 - - - - - - - 1.000 - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
23. si:rp71-36a1.3 ENSDARG00000071662 2 1 - - - - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
24. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - - - 1.000 -
25. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
26. zgc:193682 zgc:193682 15 1 - - - - - - - 1.000 -
27. IL17RA IL17RA 1 1 - - - - - - - 1.000 -
28. anpepb ENSDARG00000103878 8 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
29. zgc:113355 zgc:113355 2 1 - - - - - - - 1.000 -
30. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
31. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
32. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - - - - 1.000 - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
33. cabp1b ENSDARG00000033411 2 1 - - - - - - - 1.000 - calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
34. FRMD1_1 FRMD1_1 3 1 - - - - - - - 1.000 -
35. si:ch211-261b22.2 si:ch211-261b22.2 1 1 - - - - - - - 1.000 -
36. SLC4A10 SLC4A10 1 1 - - - - - - - 1.000 -
37. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
38. zgc:194252 ENSDARG00000057142 11 1 - - - - - - - 1.000 - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
39. si:ch211-198e13.3 5 1 - - - - - 1.000 - - - si:ch211-198e13.3, transcript variant X1
40. taf4b ENSDARG00000075732 3 1 - - - - - - - 1.000 - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
41. nphs2 ENSDARG00000042850 31 0.985 - - - - - - - 0.985 - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
42. EVA1B EVA1B 22 0.983 - - - - - 0.983 - - -
43. ROCK2_3 ROCK2_3 12 0.983 - - - - - 0.983 - - -
44. parvab ENSDARG00000035629 2 0.982 - - - - - - - - 0.982 parvin, alpha b [Source:ZFIN;Acc:ZDB-GENE-070424-60]
45. PRF1 PRF1 69 0.982 - - - - - - - - 0.982
46. rbm27 ENSDARG00000060521 185 0.968 - - - - - 0.968 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
47. CU855890.3 CU855890.3 307 0.961 - - - - - 0.961 - - -
48. SUN2 SUN2 86 0.957 - - - - - 0.957 - - -
49. TMPRSS7 5 0.957 - - - - - 0.957 - - - transmembrane protease, serine 7
50. ctsl.1 ENSDARG00000003902 25 0.957 - - - - - 0.957 - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
51. USP43 USP43 14 0.952 - - - - - - - - 0.952
52. Metazoa_SRP_2 Metazoa_SRP_2 2 0.947 - - - 0.947 - - - - -
53. HTRA2_1 HTRA2_1 1 0.947 - - - 0.947 - - - - -
54. IQCK ENSDARG00000076831, ENSDARG00000112508 6 0.947 - - - 0.947 - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
55. CR382383.3 CR382383.3 2 0.947 - - - 0.947 - - - - -
56. zgc:158345 2 0.947 - - - 0.947 - - - - - zgc:158345
57. si:dkey-18c8.3 si:dkey-18c8.3 2 0.947 - - - 0.947 - - - - -
58. BX005329.3 ENSDARG00000094694 1 0.947 - - - 0.947 - - - - -
59. cx47.1 ENSDARG00000073896 1 0.947 - - - 0.947 - - - - - connexin 47.1 [Source:ZFIN;Acc:ZDB-GENE-040912-134]
60. tec ENSDARG00000098477 2 0.947 - - - 0.947 - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
61. si:busm1-71b9.3 11 0.947 - - - 0.947 - - - - - si:busm1-71b9.3, transcript variant X4
62. sb:cb846 sb:cb846 1 0.947 - - - 0.947 - - - - -
63. CABZ01006980.1 CABZ01006980.1 5 0.947 - - - 0.947 - - - - -
64. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 0.947 - - - 0.947 - - - - - si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
65. tha1 ENSDARG00000076225 183 0.943 - - - - - 0.943 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
66. zp2.6 ENSDARG00000091409 5 0.938 - - - 0.938 - - - - - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
67. lpcat2 ENSDARG00000053010 137 0.937 - - - - - 0.937 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
68. arhgap15 ENSDARG00000062349 28 0.935 - - - - - 0.935 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
69. CMA1_1 CMA1_1 7 0.931 - - - 0.931 - - - - -
70. chmp6b ENSDARG00000102024 37 0.929 - - - - - 0.929 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
71. si:dkey-112e17.1 ENSDARG00000093201 1 0.927 - - - - - 0.927 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
72. FNDC3A ENSDARG00000105503 11 0.927 - - - - - 0.927 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
73. PRTFDC1 ENSDARG00000011683 11 0.927 - - - - - 0.927 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
74. ripply2 ENSDARG00000070535 18 0.927 - - - - - 0.927 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
75. TMEM121_1 TMEM121_1 22 0.927 - - - - - 0.927 - - -
76. crybb1l2 ENSDARG00000016793 723 0.927 - - - - - 0.927 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
77. ZC2HC1C ENSDARG00000070526 14 0.927 - - - - - 0.927 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
78. irak1 ENSDARG00000025949 19 0.927 - - - - - 0.927 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
79. si:ch211-125e6.12 ENSDARG00000092090 3 0.927 - - - - - 0.927 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
80. CT573356.3 CT573356.3 2 0.927 - - - - - 0.927 - - -
81. il17c ENSDARG00000057180, ENSDARG00000109701 3 0.927 - - - - - 0.927 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
82. TESPA1 ENSDARG00000053311 29 0.927 - - - - - 0.927 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
83. NINJ1 ENSDARG00000103663 43 0.927 - - - - - 0.927 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
84. olfcg2 ENSDARG00000101083 8 0.927 - - - - - 0.927 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
85. BICD1 BICD1 9 0.927 - - - - - 0.927 - - -
86. sox11a ENSDARG00000077811 25 0.927 - - - - - 0.927 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
87. NOX4 3 0.927 - - - - - 0.927 - - - NADPH oxidase 4
88. vtg3 ENSDARG00000016448 8 0.927 - - - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
89. FAM196A 82 0.927 - - - - - 0.927 - - - family with sequence similarity 196 member A
90. TSPAN1 ENSDARG00000052027 4 0.927 - - - - - 0.927 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
91. or115-12 ENSDARG00000044748 2 0.927 - - - - - 0.927 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
92. irf1b ENSDARG00000043249 30 0.927 - - - - - 0.927 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
93. BX284672.1 BX284672.1 11 0.927 - - - - - 0.927 - - -
94. si:ch211-219a15.3 ENSDARG00000087659 12 0.927 - - - - - 0.927 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
95. uts1 ENSDARG00000014927 35 0.927 - - - - - 0.927 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
96. thbs4a ENSDARG00000102777 625 0.927 - - - - - 0.927 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
97. C1QTNF6 C1QTNF6 2 0.927 - - - - - 0.927 - - -
98. CABZ01084273.1 CABZ01084273.1 16 0.927 - - - - - 0.927 - - -
99. TGFBR2 TGFBR2 2 0.927 - - - - - 0.927 - - -
100. rhobtb2b ENSDARG00000089340 4 0.927 - - - - - 0.927 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA