Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vent

Gene Name Gene ID Reads Annotation
vent ENSDARG00000100483 74 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]










Genes with expression patterns similar to vent

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vent ENSDARG00000100483 74 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
2. ccdc14 ENSDARG00000098734 3 1.927 - - - - - 0.927 - 1.000 - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. URB1 ENSDARG00000060308 78 1.719 - - 0.792 - - 0.927 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
4. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.673 - - - 0.927 - - - 0.746 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
5. si:busm1-266f07.2 ENSDARG00000031745 19 1.519 - - - - - 0.783 - 0.736 - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
6. PEG3_39 PEG3_39 3 1 - - - - - - - 1.000 -
7. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - - - - 1.000 - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
8. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - - - 1.000 -
9. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
10. U6_33 U6_33 0 1 - - - - - - - 1.000 -
11. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
12. cabp1b ENSDARG00000033411 2 1 - - - - - - - 1.000 - calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
13. taf4b ENSDARG00000075732 3 1 - - - - - - - 1.000 - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
14. si:rp71-36a1.3 ENSDARG00000071662 2 1 - - - - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
15. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
16. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
17. IL17RA IL17RA 1 1 - - - - - - - 1.000 -
18. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
19. BX511061.2 BX511061.2 30 1 - - - - - - - 1.000 -
20. si:ch211-261b22.2 si:ch211-261b22.2 1 1 - - - - - - - 1.000 -
21. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - - - - - 1.000 - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
22. larsa ENSDARG00000090988 26 1 - - - - - - - 1.000 - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
23. anpepb ENSDARG00000103878 8 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
24. zgc:113355 zgc:113355 2 1 - - - - - - - 1.000 -
25. si:ch211-198e13.3 5 1 - - - - - 1.000 - - - si:ch211-198e13.3, transcript variant X1
26. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
27. CABZ01034707.1 CABZ01034707.1 122 1 - - - - - 1.000 - - -
28. top1 ENSDARG00000086775 8 1 - - - - - - - 1.000 - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
29. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
30. pth1ra ENSDARG00000020957 0 1 - - - - - - - 1.000 - parathyroid hormone 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-991123-8]
31. fank1 ENSDARG00000039657 9 1 - - - - - - - 1.000 - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
32. SLC4A10 SLC4A10 1 1 - - - - - - - 1.000 -
33. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - - 1.000 - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
34. si:ch211-187g4.1 ENSDARG00000094350 0 1 - - - - - - - 1.000 - si:ch211-187g4.1 [Source:ZFIN;Acc:ZDB-GENE-070912-161]
35. iffo1a ENSDARG00000062976 5 1 - - - - - - - 1.000 - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
36. zgc:194252 ENSDARG00000057142 11 1 - - - - - - - 1.000 - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
37. csf1rb ENSDARG00000053624 9 1 - - - - - - - 1.000 - colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
38. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - - 1.000 -
39. FRMD1_1 FRMD1_1 3 1 - - - - - - - 1.000 -
40. zgc:193682 zgc:193682 15 1 - - - - - - - 1.000 -
41. nphs2 ENSDARG00000042850 31 0.985 - - - - - - - 0.985 - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
42. ROCK2_3 ROCK2_3 12 0.983 - - - - - 0.983 - - -
43. EVA1B EVA1B 22 0.983 - - - - - 0.983 - - -
44. PRF1 PRF1 69 0.982 - - - - - - - - 0.982
45. parvab ENSDARG00000035629 2 0.982 - - - - - - - - 0.982 parvin, alpha b [Source:ZFIN;Acc:ZDB-GENE-070424-60]
46. rbm27 ENSDARG00000060521 185 0.968 - - - - - 0.968 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
47. CU855890.3 CU855890.3 307 0.961 - - - - - 0.961 - - -
48. ctsl.1 ENSDARG00000003902 25 0.957 - - - - - 0.957 - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
49. SUN2 SUN2 86 0.957 - - - - - 0.957 - - -
50. TMPRSS7 5 0.957 - - - - - 0.957 - - - transmembrane protease, serine 7
51. USP43 USP43 14 0.952 - - - - - - - - 0.952
52. zgc:158345 2 0.947 - - - 0.947 - - - - - zgc:158345
53. Metazoa_SRP_2 Metazoa_SRP_2 2 0.947 - - - 0.947 - - - - -
54. IQCK ENSDARG00000076831, ENSDARG00000112508 6 0.947 - - - 0.947 - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
55. si:busm1-71b9.3 11 0.947 - - - 0.947 - - - - - si:busm1-71b9.3, transcript variant X4
56. HTRA2_1 HTRA2_1 1 0.947 - - - 0.947 - - - - -
57. tec ENSDARG00000098477 2 0.947 - - - 0.947 - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
58. CR382383.3 CR382383.3 2 0.947 - - - 0.947 - - - - -
59. cx47.1 ENSDARG00000073896 1 0.947 - - - 0.947 - - - - - connexin 47.1 [Source:ZFIN;Acc:ZDB-GENE-040912-134]
60. CABZ01006980.1 CABZ01006980.1 5 0.947 - - - 0.947 - - - - -
61. sb:cb846 sb:cb846 1 0.947 - - - 0.947 - - - - -
62. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 0.947 - - - 0.947 - - - - - si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
63. BX005329.3 ENSDARG00000094694 1 0.947 - - - 0.947 - - - - -
64. si:dkey-18c8.3 si:dkey-18c8.3 2 0.947 - - - 0.947 - - - - -
65. tha1 ENSDARG00000076225 183 0.943 - - - - - 0.943 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
66. zp2.6 ENSDARG00000091409 5 0.938 - - - 0.938 - - - - - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
67. lpcat2 ENSDARG00000053010 137 0.937 - - - - - 0.937 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
68. arhgap15 ENSDARG00000062349 28 0.935 - - - - - 0.935 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
69. CMA1_1 CMA1_1 7 0.931 - - - 0.931 - - - - -
70. chmp6b ENSDARG00000102024 37 0.929 - - - - - 0.929 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
71. BX323854.4 BX323854.4 3 0.927 - - - - - 0.927 - - -
72. FNDC3A ENSDARG00000105503 11 0.927 - - - - - 0.927 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
73. NINJ1 ENSDARG00000103663 43 0.927 - - - - - 0.927 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
74. fam166b ENSDARG00000100292 14 0.927 - - - - - 0.927 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
75. trpm5 ENSDARG00000059792 3 0.927 - - - - - 0.927 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
76. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 0.927 - - - - - 0.927 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
77. si:dkey-119g10.4 si:dkey-119g10.4 7 0.927 - - - - - 0.927 - - -
78. CABZ01084273.1 CABZ01084273.1 16 0.927 - - - - - 0.927 - - -
79. or115-12 ENSDARG00000044748 2 0.927 - - - - - 0.927 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
80. sox11a ENSDARG00000077811 25 0.927 - - - - - 0.927 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
81. dok1a ENSDARG00000078108 9 0.927 - - - - - 0.927 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
82. CR356223.1 ENSDARG00000093865 1 0.927 - - - - - 0.927 - - -
83. C1QTNF6 C1QTNF6 2 0.927 - - - - - 0.927 - - -
84. OTOS ENSDARG00000108475 180 0.927 - - - - - 0.927 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
85. il12bb ENSDARG00000054542 6 0.927 - - - - - 0.927 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
86. BX004880.2 BX004880.2 83 0.927 - - - - - 0.927 - - -
87. kcnh3 ENSDARG00000069560 4 0.927 - - - - - 0.927 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
88. si:ch211-117l17.4 ENSDARG00000103534 24 0.927 - - - - - 0.927 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
89. CT573356.3 CT573356.3 2 0.927 - - - - - 0.927 - - -
90. si:dkey-112e17.1 ENSDARG00000093201 1 0.927 - - - - - 0.927 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
91. uts1 ENSDARG00000014927 35 0.927 - - - - - 0.927 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
92. cldn10l2 ENSDARG00000105042 11 0.927 - - - - - 0.927 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
93. snR50 snR50 1 0.927 - - - - - 0.927 - - -
94. olfcg2 ENSDARG00000101083 8 0.927 - - - - - 0.927 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
95. ftr58 ENSDARG00000071238 10 0.927 - - - - - 0.927 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
96. tbl2 ENSDARG00000043357 125 0.927 - - - - - 0.927 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
97. foxi1 ENSDARG00000104566 176 0.927 - - - - - 0.927 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
98. thbs4a ENSDARG00000102777 625 0.927 - - - - - 0.927 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
99. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 0.927 - - - - - 0.927 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
100. irak1 ENSDARG00000025949 19 0.927 - - - - - 0.927 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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